RNA–Protein interactions for RNA: ENST00000339098.9

CERKL-201, Transcript of ceramide kinase like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CERKL, Length 1,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CERKL-201ENST00000339098 CDK12Q9NYV4 1490 aaPredicted RBP27.39■■□□□ 1.97
CERKL-201ENST00000339098 HOXC9P31274 260 aa27.38■■□□□ 1.97
CERKL-201ENST00000339098 IP6K1Q92551 441 aa27.38■■□□□ 1.97
CERKL-201ENST00000339098 ABCC6O95255 1503 aa27.38■■□□□ 1.97
CERKL-201ENST00000339098 LMO7Q8WWI1 1683 aa27.37■■□□□ 1.97
CERKL-201ENST00000339098 COL14A1Q05707 1796 aaKnown RBP27.37■■□□□ 1.97
CERKL-201ENST00000339098 AXIN2Q9Y2T1 843 aa27.36■■□□□ 1.97
CERKL-201ENST00000339098 HSP90AB2PQ58FF8 381 aa27.36■■□□□ 1.97
CERKL-201ENST00000339098 ILDR1Q86SU0 546 aaPredicted RBP27.36■■□□□ 1.97
CERKL-201ENST00000339098 INSRP06213 1382 aa27.35■■□□□ 1.97
CERKL-201ENST00000339098 BLMP54132 1417 aaPredicted RBP27.33■■□□□ 1.97
CERKL-201ENST00000339098 CAMTA1Q9Y6Y1 1673 aa27.33■■□□□ 1.97
CERKL-201ENST00000339098 PLCH1Q4KWH8 1693 aa27.32■■□□□ 1.96
CERKL-201ENST00000339098 CCDC184Q52MB2 194 aa27.32■■□□□ 1.96
CERKL-201ENST00000339098 COL3A1P02461 1466 aaPredicted RBP27.31■■□□□ 1.96
CERKL-201ENST00000339098 CFAP53Q96M91 514 aa27.3■■□□□ 1.96
CERKL-201ENST00000339098 C8orf37Q96NL8 207 aa27.29■■□□□ 1.96
CERKL-201ENST00000339098 NWD2Q9ULI1 1742 aa27.29■■□□□ 1.96
CERKL-201ENST00000339098 MEX3CQ5U5Q3 659 aaKnown RBP27.28■■□□□ 1.96
CERKL-201ENST00000339098 BTG4Q9NY30 223 aa27.28■■□□□ 1.96
CERKL-201ENST00000339098 SLIT2O94813 1529 aa27.28■■□□□ 1.96
CERKL-201ENST00000339098 NGLY1Q96IV0 654 aa27.27■■□□□ 1.96
CERKL-201ENST00000339098 CCER2I3L3R5 266 aa27.27■■□□□ 1.96
CERKL-201ENST00000339098 ERBB3P21860 1342 aa27.26■■□□□ 1.95
CERKL-201ENST00000339098 COL5A2P05997 1499 aaPredicted RBP27.26■■□□□ 1.95
CERKL-201ENST00000339098 EIF4A2Q14240 407 aaKnown RBP27.26■■□□□ 1.95
CERKL-201ENST00000339098 DIAPH1O60610 1272 aaKnown RBP27.25■■□□□ 1.95
CERKL-201ENST00000339098 FNBP4Q8N3X1 1017 aaPredicted RBP27.25■■□□□ 1.95
CERKL-201ENST00000339098 MRS2Q9HD23 443 aa27.25■■□□□ 1.95
CERKL-201ENST00000339098 IL13P35225 146 aa27.24■■□□□ 1.95
CERKL-201ENST00000339098 ANKRD24Q8TF21 1146 aa27.24■■□□□ 1.95
CERKL-201ENST00000339098 LTV1Q96GA3 475 aaPredicted RBP27.24■■□□□ 1.95
CERKL-201ENST00000339098 NRAPQ86VF7 1730 aa27.24■■□□□ 1.95
CERKL-201ENST00000339098 RGPD2P0DJD1 1756 aa27.23■■□□□ 1.95
CERKL-201ENST00000339098 BCL9LQ86UU0 1499 aa27.21■■□□□ 1.95
CERKL-201ENST00000339098 FAM208AQ9UK61 1670 aaKnown RBP27.21■■□□□ 1.95
CERKL-201ENST00000339098 EVA1CP58658 441 aa27.2■■□□□ 1.94
CERKL-201ENST00000339098 STRN4Q9NRL3 753 aa27.2■■□□□ 1.94
CERKL-201ENST00000339098 RGPD1P0DJD0 1748 aa27.2■■□□□ 1.94
CERKL-201ENST00000339098 WDR17Q8IZU2 1322 aa27.2■■□□□ 1.94
CERKL-201ENST00000339098 AFF2P51816 1311 aa27.18■■□□□ 1.94
CERKL-201ENST00000339098 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.18■■□□□ 1.94
CERKL-201ENST00000339098 CSB-PGBD3P0DP91 1061 aa27.17■■□□□ 1.94
CERKL-201ENST00000339098 LARP1Q6PKG0 1096 aaKnown RBP27.17■■□□□ 1.94
CERKL-201ENST00000339098 UNC5CLQ8IV45 518 aa27.17■■□□□ 1.94
CERKL-201ENST00000339098 NUDCQ9Y266 331 aa27.17■■□□□ 1.94
CERKL-201ENST00000339098 NBPF6Q5VWK0 638 aa27.17■■□□□ 1.94
CERKL-201ENST00000339098 NBPF4Q96M43 638 aa27.17■■□□□ 1.94
CERKL-201ENST00000339098 EYA1Q99502 592 aa27.17■■□□□ 1.94
CERKL-201ENST00000339098 PNISRQ8TF01 805 aaKnown RBP27.16■■□□□ 1.94
CERKL-201ENST00000339098 USP21Q9UK80 565 aa27.16■■□□□ 1.94
CERKL-201ENST00000339098 IGSF1Q8N6C5 1336 aa27.15■■□□□ 1.94
CERKL-201ENST00000339098 NLRP2Q9NX02 1062 aa27.14■■□□□ 1.94
CERKL-201ENST00000339098 U2SURPO15042 1029 aaKnown RBP27.14■■□□□ 1.93
CERKL-201ENST00000339098 TOM1L2Q6ZVM7 507 aa27.14■■□□□ 1.93
CERKL-201ENST00000339098 CRB1P82279 1406 aa27.13■■□□□ 1.93
CERKL-201ENST00000339098 NCAPD2Q15021 1401 aa27.11■■□□□ 1.93
CERKL-201ENST00000339098 U2AF1L5P0DN76 240 aaPredicted RBP27.11■■□□□ 1.93
CERKL-201ENST00000339098 U2AF1Q01081 240 aaKnown RBP eCLIP27.11■■□□□ 1.93
CERKL-201ENST00000339098 WDR43Q15061 677 aaKnown RBP eCLIP27.11■■□□□ 1.93
CERKL-201ENST00000339098 CARD10Q9BWT7 1032 aa27.11■■□□□ 1.93
CERKL-201ENST00000339098 VPS72Q15906 364 aa27.09■■□□□ 1.93
CERKL-201ENST00000339098 USHBP1Q8N6Y0 703 aa27.09■■□□□ 1.93
CERKL-201ENST00000339098 ADAMTS8Q9UP79 889 aa27.08■■□□□ 1.93
CERKL-201ENST00000339098 KDRP35968 1356 aa27.08■■□□□ 1.93
CERKL-201ENST00000339098 HMOX1P09601 288 aa27.08■■□□□ 1.92
CERKL-201ENST00000339098 SULT6B1Q6IMI4 303 aa27.08■■□□□ 1.92
CERKL-201ENST00000339098 AEBP1Q8IUX7 1158 aa27.08■■□□□ 1.92
CERKL-201ENST00000339098 SPATA31A5Q5VU36 1347 aa27.07■■□□□ 1.92
CERKL-201ENST00000339098 SPATA31A7Q8IWB4 1347 aa27.07■■□□□ 1.92
CERKL-201ENST00000339098 SPATA31A1Q5TZJ5 1347 aa27.06■■□□□ 1.92
CERKL-201ENST00000339098 USP35Q9P2H5 1018 aa27.06■■□□□ 1.92
CERKL-201ENST00000339098 ATRNO75882 1429 aa27.05■■□□□ 1.92
CERKL-201ENST00000339098 FCHSD2O94868 740 aa27.05■■□□□ 1.92
CERKL-201ENST00000339098 ZNF772Q68DY9 489 aaPredicted RBP27.05■■□□□ 1.92
CERKL-201ENST00000339098 FAM9BQ8IZU0 186 aa27.05■■□□□ 1.92
CERKL-201ENST00000339098 RSPH6AQ9H0K4 717 aa27.04■■□□□ 1.92
CERKL-201ENST00000339098 TRPC5Q9UL62 973 aaPredicted RBP27.04■■□□□ 1.92
CERKL-201ENST00000339098 CCDC9Q9Y3X0 531 aaKnown RBP27.04■■□□□ 1.92
CERKL-201ENST00000339098 TCP11L2Q8N4U5 519 aa27.02■■□□□ 1.92
CERKL-201ENST00000339098 QTRT2Q9H974 415 aaKnown RBP27.02■■□□□ 1.92
CERKL-201ENST00000339098 RGS17Q9UGC6 210 aaPredicted RBP27.01■■□□□ 1.91
CERKL-201ENST00000339098 THRAP3Q9Y2W1 955 aaKnown RBP27.01■■□□□ 1.91
CERKL-201ENST00000339098 GJD4Q96KN9 370 aaPredicted RBP27■■□□□ 1.91
CERKL-201ENST00000339098 WNK3Q9BYP7 1800 aa27■■□□□ 1.91
CERKL-201ENST00000339098 GLI3P10071 1580 aa26.99■■□□□ 1.91
CERKL-201ENST00000339098 PRKAR2BP31323 418 aa26.98■■□□□ 1.91
CERKL-201ENST00000339098 MEGF6O75095 1541 aa26.98■■□□□ 1.91
CERKL-201ENST00000339098 RAPGEF4Q8WZA2 1011 aa26.98■■□□□ 1.91
CERKL-201ENST00000339098 PLEKHF1Q96S99 279 aa26.98■■□□□ 1.91
CERKL-201ENST00000339098 IL2RBP14784 551 aa26.97■■□□□ 1.91
CERKL-201ENST00000339098 BARGINQ6ZT62 677 aa26.97■■□□□ 1.91
CERKL-201ENST00000339098 PHF23Q9BUL5 403 aaPredicted RBP26.97■■□□□ 1.91
CERKL-201ENST00000339098 DISP2A7MBM2 1401 aa26.96■■□□□ 1.91
CERKL-201ENST00000339098 PNNQ9H307 717 aaKnown RBP26.96■■□□□ 1.91
CERKL-201ENST00000339098 PARP4Q9UKK3 1724 aaKnown RBP26.96■■□□□ 1.91
CERKL-201ENST00000339098 CCDC146Q8IYE0 955 aa26.95■■□□□ 1.9
CERKL-201ENST00000339098 PHACTR3Q96KR7 559 aa26.94■■□□□ 1.9
CERKL-201ENST00000339098 TATP17735 454 aaPredicted RBP26.93■■□□□ 1.9
CERKL-201ENST00000339098 OVOS2A0A0G2JMS6 1433 aa26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms