RNA–Protein interactions for RNA: ENST00000337339.6

MSL3-202, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-202ENST00000337339 LMOD3Q0VAK6 560 aa12.19□□□□□ -0.46
MSL3-202ENST00000337339 TBC1D2Q9BYX2 928 aa12.19□□□□□ -0.46
MSL3-202ENST00000337339 IL16Q14005 1332 aa12.19□□□□□ -0.46
MSL3-202ENST00000337339 ALKQ9UM73 1620 aa12.19□□□□□ -0.46
MSL3-202ENST00000337339 CHD1LQ86WJ1 897 aa12.19□□□□□ -0.46
MSL3-202ENST00000337339 ZNF692Q9BU19 519 aaPredicted RBP12.19□□□□□ -0.46
MSL3-202ENST00000337339 MYO3AQ8NEV4 1616 aa12.19□□□□□ -0.46
MSL3-202ENST00000337339 FOXO3O43524 673 aa12.18□□□□□ -0.46
MSL3-202ENST00000337339 LMOD2Q6P5Q4 547 aa12.18□□□□□ -0.46
MSL3-202ENST00000337339 EIF4A2Q14240 407 aaKnown RBP12.18□□□□□ -0.46
MSL3-202ENST00000337339 BRPF3Q9ULD4 1205 aa12.18□□□□□ -0.46
MSL3-202ENST00000337339 PPP6R1Q9UPN7 881 aa12.18□□□□□ -0.46
MSL3-202ENST00000337339 PRR36Q9H6K5 1346 aa12.18□□□□□ -0.46
MSL3-202ENST00000337339 ALDH1L2Q3SY69 923 aa12.18□□□□□ -0.46
MSL3-202ENST00000337339 TBC1D32Q96NH3 1257 aa12.18□□□□□ -0.46
MSL3-202ENST00000337339 AMOTL2Q9Y2J4 779 aa12.18□□□□□ -0.46
MSL3-202ENST00000337339 A2ML1A8K2U0 1454 aa12.18□□□□□ -0.46
MSL3-202ENST00000337339 CD163L1Q9NR16 1453 aa12.18□□□□□ -0.46
MSL3-202ENST00000337339 NLRP6P59044 892 aa12.17□□□□□ -0.46
MSL3-202ENST00000337339 MRPL50Q8N5N7 158 aaKnown RBP12.17□□□□□ -0.46
MSL3-202ENST00000337339 ARHGEF28Q8N1W1 1705 aaKnown RBP12.17□□□□□ -0.46
MSL3-202ENST00000337339 HDAC1Q13547 482 aaPredicted RBP12.17□□□□□ -0.46
MSL3-202ENST00000337339 CFAP44Q96MT7 982 aa12.17□□□□□ -0.46
MSL3-202ENST00000337339 IFT57Q9NWB7 429 aa12.17□□□□□ -0.46
MSL3-202ENST00000337339 HSCBQ8IWL3 235 aa12.17□□□□□ -0.46
MSL3-202ENST00000337339 TNRQ92752 1358 aa12.16□□□□□ -0.46
MSL3-202ENST00000337339 ZC3H13Q5T200 1668 aaKnown RBP12.16□□□□□ -0.46
MSL3-202ENST00000337339 TTC21BQ7Z4L5 1316 aa12.16□□□□□ -0.46
MSL3-202ENST00000337339 ARHGEF40Q8TER5 1519 aa12.16□□□□□ -0.46
MSL3-202ENST00000337339 SHPRHQ149N8 1683 aa12.16□□□□□ -0.46
MSL3-202ENST00000337339 ZBTB7BO15156 539 aaPredicted RBP12.15□□□□□ -0.46
MSL3-202ENST00000337339 SLC4A2P04920 1241 aa12.15□□□□□ -0.46
MSL3-202ENST00000337339 MYO5BQ9ULV0 1848 aa12.15□□□□□ -0.46
MSL3-202ENST00000337339 SMC5Q8IY18 1101 aa12.15□□□□□ -0.46
MSL3-202ENST00000337339 TMEM131LA2VDJ0 1609 aa12.15□□□□□ -0.46
MSL3-202ENST00000337339 HSP90AB1P08238 724 aaKnown RBP12.15□□□□□ -0.46
MSL3-202ENST00000337339 API5Q9BZZ5 524 aaKnown RBP12.15□□□□□ -0.46
MSL3-202ENST00000337339 TSPYL4Q9UJ04 414 aa12.15□□□□□ -0.46
MSL3-202ENST00000337339 ROBO2Q9HCK4 1378 aa12.14□□□□□ -0.47
MSL3-202ENST00000337339 F6X3S4 739 aa12.14□□□□□ -0.47
MSL3-202ENST00000337339 CHMP4BQ9H444 224 aaKnown RBP12.14□□□□□ -0.47
MSL3-202ENST00000337339 PNPLA6Q8IY17 1366 aa12.14□□□□□ -0.47
MSL3-202ENST00000337339 NUCB1Q02818 461 aa12.14□□□□□ -0.47
MSL3-202ENST00000337339 PREX1Q8TCU6 1659 aa12.13□□□□□ -0.47
MSL3-202ENST00000337339 C16orf71Q8IYS4 520 aaPredicted RBP12.13□□□□□ -0.47
MSL3-202ENST00000337339 EDC4Q6P2E9 1401 aaKnown RBP12.13□□□□□ -0.47
MSL3-202ENST00000337339 RICTORQ6R327 1708 aa12.13□□□□□ -0.47
MSL3-202ENST00000337339 SMARCA5O60264 1052 aaPredicted RBP12.12□□□□□ -0.47
MSL3-202ENST00000337339 ABTB2Q8N961 1025 aa12.12□□□□□ -0.47
MSL3-202ENST00000337339 USHBP1Q8N6Y0 703 aa12.12□□□□□ -0.47
MSL3-202ENST00000337339 NLRP1Q9C000 1473 aa12.11□□□□□ -0.47
MSL3-202ENST00000337339 TMEM2Q9UHN6 1383 aa12.11□□□□□ -0.47
MSL3-202ENST00000337339 COL3A1P02461 1466 aaPredicted RBP12.1□□□□□ -0.47
MSL3-202ENST00000337339 ZNF428Q96B54 188 aa12.1□□□□□ -0.47
MSL3-202ENST00000337339 LRRC7Q96NW7 1537 aa12.1□□□□□ -0.47
MSL3-202ENST00000337339 FAM135BQ49AJ0 1406 aa12.1□□□□□ -0.47
MSL3-202ENST00000337339 MAP3K19Q56UN5 1328 aa12.1□□□□□ -0.47
MSL3-202ENST00000337339 MTHFSDQ2M296 383 aaKnown RBP12.1□□□□□ -0.47
MSL3-202ENST00000337339 SIRT2Q8IXJ6 389 aa12.1□□□□□ -0.47
MSL3-202ENST00000337339 GCC1Q96CN9 775 aa12.1□□□□□ -0.47
MSL3-202ENST00000337339 RBM42Q9BTD8 480 aaKnown RBP12.1□□□□□ -0.47
MSL3-202ENST00000337339 CLTCQ00610 1675 aaKnown RBP12.1□□□□□ -0.47
MSL3-202ENST00000337339 XPCQ01831 940 aaPredicted RBP12.09□□□□□ -0.47
MSL3-202ENST00000337339 FKBP5Q13451 457 aaPredicted RBP12.09□□□□□ -0.47
MSL3-202ENST00000337339 MEIS3Q99687 375 aa12.09□□□□□ -0.47
MSL3-202ENST00000337339 STK31Q9BXU1 1019 aa12.09□□□□□ -0.47
MSL3-202ENST00000337339 EIF2S2P20042 333 aaKnown RBP12.09□□□□□ -0.47
MSL3-202ENST00000337339 OTUD7AQ8TE49 926 aaPredicted RBP12.08□□□□□ -0.48
MSL3-202ENST00000337339 TBC1D9Q6ZT07 1266 aa12.08□□□□□ -0.48
MSL3-202ENST00000337339 G2E3Q7L622 706 aa12.08□□□□□ -0.48
MSL3-202ENST00000337339 ZNF853P0CG23 659 aa12.08□□□□□ -0.48
MSL3-202ENST00000337339 ARHGAP45Q92619 1136 aa12.08□□□□□ -0.48
MSL3-202ENST00000337339 ATP7BP35670 1465 aa12.07□□□□□ -0.48
MSL3-202ENST00000337339 CPS1P31327 1500 aa12.07□□□□□ -0.48
MSL3-202ENST00000337339 HAP1P54257 671 aaPredicted RBP12.07□□□□□ -0.48
MSL3-202ENST00000337339 EYA1Q99502 592 aa12.07□□□□□ -0.48
MSL3-202ENST00000337339 KCNA6P17658 529 aa12.07□□□□□ -0.48
MSL3-202ENST00000337339 TSHZ3Q63HK5 1081 aa12.07□□□□□ -0.48
MSL3-202ENST00000337339 THEMISQ8N1K5 641 aaPredicted RBP12.07□□□□□ -0.48
MSL3-202ENST00000337339 CPSF1Q10570 1443 aaKnown RBP12.06□□□□□ -0.48
MSL3-202ENST00000337339 CHMP5Q9NZZ3 219 aa12.06□□□□□ -0.48
MSL3-202ENST00000337339 EXOC6BQ9Y2D4 811 aa12.06□□□□□ -0.48
MSL3-202ENST00000337339 RIMBP3CA6NJZ7 1639 aa12.06□□□□□ -0.48
MSL3-202ENST00000337339 RIMBP3BA6NNM3 1639 aa12.06□□□□□ -0.48
MSL3-202ENST00000337339 RIMBP3Q9UFD9 1639 aa12.06□□□□□ -0.48
MSL3-202ENST00000337339 BMP2KLQ5H9B9 411 aa12.05□□□□□ -0.48
MSL3-202ENST00000337339 MED14O60244 1454 aa12.05□□□□□ -0.48
MSL3-202ENST00000337339 USP32Q8NFA0 1604 aa12.05□□□□□ -0.48
MSL3-202ENST00000337339 CHL1O00533 1208 aa12.05□□□□□ -0.48
MSL3-202ENST00000337339 ESCO1Q5FWF5 840 aa12.05□□□□□ -0.48
MSL3-202ENST00000337339 NOL8Q76FK4 1167 aaKnown RBP12.04□□□□□ -0.48
MSL3-202ENST00000337339 DIP2BQ9P265 1576 aa12.04□□□□□ -0.48
MSL3-202ENST00000337339 CDC45O75419 566 aa12.04□□□□□ -0.48
MSL3-202ENST00000337339 PSME1Q06323 249 aa12.04□□□□□ -0.48
MSL3-202ENST00000337339 PLEKHG3A1L390 1219 aa12.04□□□□□ -0.48
MSL3-202ENST00000337339 TRIM6-TRIM34B2RNG4 842 aa12.04□□□□□ -0.48
MSL3-202ENST00000337339 AATKQ6ZMQ8 1374 aa12.03□□□□□ -0.48
MSL3-202ENST00000337339 ABCC4O15439 1325 aa12.03□□□□□ -0.48
MSL3-202ENST00000337339 ADRA2BP18089 450 aa12.03□□□□□ -0.48
MSL3-202ENST00000337339 RILPL2Q969X0 211 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms