RNA–Protein interactions for RNA: ENST00000335440.10

PDE9A-203, Transcript of phosphodiesterase 9A, humanhuman

TSL 1 (best) BASIC

Gene PDE9A, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE9A-203ENST00000335440 CDK12Q9NYV4 1490 aaPredicted RBP23.59■■□□□ 1.37
PDE9A-203ENST00000335440 AMPHP49418 695 aa23.58■■□□□ 1.37
PDE9A-203ENST00000335440 ZBTB7CA1YPR0 619 aa23.57■■□□□ 1.36
PDE9A-203ENST00000335440 FAM83GA6ND36 823 aa23.57■■□□□ 1.36
PDE9A-203ENST00000335440 CCER2I3L3R5 266 aa23.57■■□□□ 1.36
PDE9A-203ENST00000335440 BLMP54132 1417 aaPredicted RBP23.57■■□□□ 1.36
PDE9A-203ENST00000335440 MTHFSP49914 203 aa23.56■■□□□ 1.36
PDE9A-203ENST00000335440 CHRNA2Q15822 529 aa23.56■■□□□ 1.36
PDE9A-203ENST00000335440 MEX3CQ5U5Q3 659 aaKnown RBP23.56■■□□□ 1.36
PDE9A-203ENST00000335440 PPM1GO15355 546 aaPredicted RBP23.56■■□□□ 1.36
PDE9A-203ENST00000335440 IP6K1Q92551 441 aa23.56■■□□□ 1.36
PDE9A-203ENST00000335440 HOXC9P31274 260 aa23.55■■□□□ 1.36
PDE9A-203ENST00000335440 CAMTA1Q9Y6Y1 1673 aa23.55■■□□□ 1.36
PDE9A-203ENST00000335440 SLIT2O94813 1529 aa23.54■■□□□ 1.36
PDE9A-203ENST00000335440 C8orf37Q96NL8 207 aa23.53■■□□□ 1.36
PDE9A-203ENST00000335440 NRAPQ86VF7 1730 aa23.53■■□□□ 1.36
PDE9A-203ENST00000335440 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.53■■□□□ 1.36
PDE9A-203ENST00000335440 INSRP06213 1382 aa23.53■■□□□ 1.36
PDE9A-203ENST00000335440 FAM208AQ9UK61 1670 aaKnown RBP23.52■■□□□ 1.36
PDE9A-203ENST00000335440 NGLY1Q96IV0 654 aa23.52■■□□□ 1.36
PDE9A-203ENST00000335440 AXIN2Q9Y2T1 843 aa23.52■■□□□ 1.36
PDE9A-203ENST00000335440 COL5A2P05997 1499 aaPredicted RBP23.51■■□□□ 1.35
PDE9A-203ENST00000335440 HSP90AB2PQ58FF8 381 aa23.5■■□□□ 1.35
PDE9A-203ENST00000335440 BTG4Q9NY30 223 aa23.5■■□□□ 1.35
PDE9A-203ENST00000335440 FNBP4Q8N3X1 1017 aaPredicted RBP23.5■■□□□ 1.35
PDE9A-203ENST00000335440 CFAP53Q96M91 514 aa23.49■■□□□ 1.35
PDE9A-203ENST00000335440 ERBB3P21860 1342 aa23.49■■□□□ 1.35
PDE9A-203ENST00000335440 COL3A1P02461 1466 aaPredicted RBP23.48■■□□□ 1.35
PDE9A-203ENST00000335440 RGPD2P0DJD1 1756 aa23.47■■□□□ 1.35
PDE9A-203ENST00000335440 BCL9LQ86UU0 1499 aa23.45■■□□□ 1.35
PDE9A-203ENST00000335440 AFF2P51816 1311 aa23.45■■□□□ 1.34
PDE9A-203ENST00000335440 ANKRD24Q8TF21 1146 aa23.45■■□□□ 1.34
PDE9A-203ENST00000335440 EVA1CP58658 441 aa23.44■■□□□ 1.34
PDE9A-203ENST00000335440 UNC5CLQ8IV45 518 aa23.44■■□□□ 1.34
PDE9A-203ENST00000335440 WDR17Q8IZU2 1322 aa23.44■■□□□ 1.34
PDE9A-203ENST00000335440 MRS2Q9HD23 443 aa23.43■■□□□ 1.34
PDE9A-203ENST00000335440 USP21Q9UK80 565 aa23.43■■□□□ 1.34
PDE9A-203ENST00000335440 RGPD1P0DJD0 1748 aa23.43■■□□□ 1.34
PDE9A-203ENST00000335440 EIF4A2Q14240 407 aaKnown RBP23.42■■□□□ 1.34
PDE9A-203ENST00000335440 LTV1Q96GA3 475 aaPredicted RBP23.42■■□□□ 1.34
PDE9A-203ENST00000335440 STRN4Q9NRL3 753 aa23.42■■□□□ 1.34
PDE9A-203ENST00000335440 DIAPH1O60610 1272 aaKnown RBP23.42■■□□□ 1.34
PDE9A-203ENST00000335440 CSB-PGBD3P0DP91 1061 aa23.41■■□□□ 1.34
PDE9A-203ENST00000335440 CRB1P82279 1406 aa23.4■■□□□ 1.34
PDE9A-203ENST00000335440 IL13P35225 146 aa23.4■■□□□ 1.34
PDE9A-203ENST00000335440 LARP1Q6PKG0 1096 aaKnown RBP23.39■■□□□ 1.33
PDE9A-203ENST00000335440 ZNF772Q68DY9 489 aaPredicted RBP23.38■■□□□ 1.33
PDE9A-203ENST00000335440 TOM1L2Q6ZVM7 507 aa23.38■■□□□ 1.33
PDE9A-203ENST00000335440 NUDCQ9Y266 331 aa23.38■■□□□ 1.33
PDE9A-203ENST00000335440 VPS72Q15906 364 aa23.36■■□□□ 1.33
PDE9A-203ENST00000335440 NLRP2Q9NX02 1062 aa23.36■■□□□ 1.33
PDE9A-203ENST00000335440 TRPC5Q9UL62 973 aaPredicted RBP23.36■■□□□ 1.33
PDE9A-203ENST00000335440 ATRNO75882 1429 aa23.35■■□□□ 1.33
PDE9A-203ENST00000335440 NCAPD2Q15021 1401 aa23.35■■□□□ 1.33
PDE9A-203ENST00000335440 WNK3Q9BYP7 1800 aa23.35■■□□□ 1.33
PDE9A-203ENST00000335440 IGSF1Q8N6C5 1336 aa23.35■■□□□ 1.33
PDE9A-203ENST00000335440 CCDC184Q52MB2 194 aa23.35■■□□□ 1.33
PDE9A-203ENST00000335440 EYA1Q99502 592 aa23.35■■□□□ 1.33
PDE9A-203ENST00000335440 CARD10Q9BWT7 1032 aa23.35■■□□□ 1.33
PDE9A-203ENST00000335440 NBPF6Q5VWK0 638 aa23.34■■□□□ 1.33
PDE9A-203ENST00000335440 NBPF4Q96M43 638 aa23.34■■□□□ 1.33
PDE9A-203ENST00000335440 PHF23Q9BUL5 403 aaPredicted RBP23.34■■□□□ 1.33
PDE9A-203ENST00000335440 SPATA31A5Q5VU36 1347 aa23.34■■□□□ 1.33
PDE9A-203ENST00000335440 SPATA31A7Q8IWB4 1347 aa23.34■■□□□ 1.33
PDE9A-203ENST00000335440 SPATA31A1Q5TZJ5 1347 aa23.32■■□□□ 1.32
PDE9A-203ENST00000335440 U2SURPO15042 1029 aaKnown RBP23.32■■□□□ 1.32
PDE9A-203ENST00000335440 CCDC9Q9Y3X0 531 aaKnown RBP23.31■■□□□ 1.32
PDE9A-203ENST00000335440 KDRP35968 1356 aa23.31■■□□□ 1.32
PDE9A-203ENST00000335440 THRAP3Q9Y2W1 955 aaKnown RBP23.3■■□□□ 1.32
PDE9A-203ENST00000335440 GLI3P10071 1580 aa23.3■■□□□ 1.32
PDE9A-203ENST00000335440 TCP11L2Q8N4U5 519 aa23.3■■□□□ 1.32
PDE9A-203ENST00000335440 QTRT2Q9H974 415 aaKnown RBP23.3■■□□□ 1.32
PDE9A-203ENST00000335440 USP35Q9P2H5 1018 aa23.3■■□□□ 1.32
PDE9A-203ENST00000335440 PARP4Q9UKK3 1724 aaKnown RBP23.29■■□□□ 1.32
PDE9A-203ENST00000335440 U2AF1L5P0DN76 240 aaPredicted RBP23.29■■□□□ 1.32
PDE9A-203ENST00000335440 U2AF1Q01081 240 aaKnown RBP eCLIP23.29■■□□□ 1.32
PDE9A-203ENST00000335440 WDR43Q15061 677 aaKnown RBP eCLIP23.29■■□□□ 1.32
PDE9A-203ENST00000335440 GJD4Q96KN9 370 aaPredicted RBP23.29■■□□□ 1.32
PDE9A-203ENST00000335440 USHBP1Q8N6Y0 703 aa23.28■■□□□ 1.32
PDE9A-203ENST00000335440 SULT6B1Q6IMI4 303 aa23.28■■□□□ 1.32
PDE9A-203ENST00000335440 PNISRQ8TF01 805 aaKnown RBP23.28■■□□□ 1.32
PDE9A-203ENST00000335440 RGS17Q9UGC6 210 aaPredicted RBP23.28■■□□□ 1.32
PDE9A-203ENST00000335440 BARGINQ6ZT62 677 aa23.26■■□□□ 1.31
PDE9A-203ENST00000335440 HMOX1P09601 288 aa23.25■■□□□ 1.31
PDE9A-203ENST00000335440 PLEKHG2Q9H7P9 1386 aa23.25■■□□□ 1.31
PDE9A-203ENST00000335440 AEBP1Q8IUX7 1158 aa23.25■■□□□ 1.31
PDE9A-203ENST00000335440 FCHSD2O94868 740 aa23.24■■□□□ 1.31
PDE9A-203ENST00000335440 DISP2A7MBM2 1401 aa23.23■■□□□ 1.31
PDE9A-203ENST00000335440 IL2RBP14784 551 aa23.23■■□□□ 1.31
PDE9A-203ENST00000335440 FAM9BQ8IZU0 186 aa23.23■■□□□ 1.31
PDE9A-203ENST00000335440 RAPGEF4Q8WZA2 1011 aa23.23■■□□□ 1.31
PDE9A-203ENST00000335440 CDCA7Q9BWT1 371 aaPredicted RBP23.23■■□□□ 1.31
PDE9A-203ENST00000335440 MEGF6O75095 1541 aa23.23■■□□□ 1.31
PDE9A-203ENST00000335440 THSD7AQ9UPZ6 1657 aa23.23■■□□□ 1.31
PDE9A-203ENST00000335440 PKD1L3Q7Z443 1732 aa23.22■■□□□ 1.31
PDE9A-203ENST00000335440 RBM6P78332 1123 aaKnown RBP23.22■■□□□ 1.31
PDE9A-203ENST00000335440 RSPH6AQ9H0K4 717 aa23.22■■□□□ 1.31
PDE9A-203ENST00000335440 PNNQ9H307 717 aaKnown RBP23.22■■□□□ 1.31
PDE9A-203ENST00000335440 ADAMTS8Q9UP79 889 aa23.22■■□□□ 1.31
PDE9A-203ENST00000335440 FAM98CQ17RN3 349 aaKnown RBP23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms