RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 RTL1A6NKG5 1358 aa23.66■■□□□ 1.38
CHGA-202ENST00000334654 ABCC6O95255 1503 aa23.66■■□□□ 1.38
CHGA-202ENST00000334654 ZBTB7CA1YPR0 619 aa23.66■■□□□ 1.38
CHGA-202ENST00000334654 CAMTA1Q9Y6Y1 1673 aa23.65■■□□□ 1.38
CHGA-202ENST00000334654 AMPHP49418 695 aa23.65■■□□□ 1.38
CHGA-202ENST00000334654 INSRP06213 1382 aa23.65■■□□□ 1.38
CHGA-202ENST00000334654 FLT4P35916 1363 aa23.65■■□□□ 1.38
CHGA-202ENST00000334654 PPM1GO15355 546 aaPredicted RBP23.64■■□□□ 1.38
CHGA-202ENST00000334654 HSP90AB2PQ58FF8 381 aa23.64■■□□□ 1.38
CHGA-202ENST00000334654 CDK12Q9NYV4 1490 aaPredicted RBP23.64■■□□□ 1.38
CHGA-202ENST00000334654 PLCH1Q4KWH8 1693 aa23.63■■□□□ 1.37
CHGA-202ENST00000334654 MIER1Q8N108 512 aa23.63■■□□□ 1.37
CHGA-202ENST00000334654 CCDC184Q52MB2 194 aa23.62■■□□□ 1.37
CHGA-202ENST00000334654 COL3A1P02461 1466 aaPredicted RBP23.62■■□□□ 1.37
CHGA-202ENST00000334654 SLIT2O94813 1529 aa23.62■■□□□ 1.37
CHGA-202ENST00000334654 BLMP54132 1417 aaPredicted RBP23.6■■□□□ 1.37
CHGA-202ENST00000334654 C8orf37Q96NL8 207 aa23.6■■□□□ 1.37
CHGA-202ENST00000334654 FNBP4Q8N3X1 1017 aaPredicted RBP23.59■■□□□ 1.37
CHGA-202ENST00000334654 BTG4Q9NY30 223 aa23.59■■□□□ 1.37
CHGA-202ENST00000334654 NWD2Q9ULI1 1742 aa23.59■■□□□ 1.37
CHGA-202ENST00000334654 NRAPQ86VF7 1730 aa23.58■■□□□ 1.37
CHGA-202ENST00000334654 COL5A2P05997 1499 aaPredicted RBP23.57■■□□□ 1.36
CHGA-202ENST00000334654 NGLY1Q96IV0 654 aa23.57■■□□□ 1.36
CHGA-202ENST00000334654 BCL9LQ86UU0 1499 aa23.57■■□□□ 1.36
CHGA-202ENST00000334654 ERBB3P21860 1342 aa23.56■■□□□ 1.36
CHGA-202ENST00000334654 EIF4A2Q14240 407 aaKnown RBP23.56■■□□□ 1.36
CHGA-202ENST00000334654 MEX3CQ5U5Q3 659 aaKnown RBP23.56■■□□□ 1.36
CHGA-202ENST00000334654 IL13P35225 146 aa23.56■■□□□ 1.36
CHGA-202ENST00000334654 ANKRD24Q8TF21 1146 aa23.56■■□□□ 1.36
CHGA-202ENST00000334654 RGPD2P0DJD1 1756 aa23.55■■□□□ 1.36
CHGA-202ENST00000334654 LTV1Q96GA3 475 aaPredicted RBP23.54■■□□□ 1.36
CHGA-202ENST00000334654 CFAP53Q96M91 514 aa23.53■■□□□ 1.36
CHGA-202ENST00000334654 AFF2P51816 1311 aa23.52■■□□□ 1.36
CHGA-202ENST00000334654 DIAPH1O60610 1272 aaKnown RBP23.52■■□□□ 1.36
CHGA-202ENST00000334654 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.52■■□□□ 1.36
CHGA-202ENST00000334654 WDR17Q8IZU2 1322 aa23.51■■□□□ 1.35
CHGA-202ENST00000334654 RGPD1P0DJD0 1748 aa23.51■■□□□ 1.35
CHGA-202ENST00000334654 UNC5CLQ8IV45 518 aa23.51■■□□□ 1.35
CHGA-202ENST00000334654 CCER2I3L3R5 266 aa23.5■■□□□ 1.35
CHGA-202ENST00000334654 LARP1Q6PKG0 1096 aaKnown RBP23.5■■□□□ 1.35
CHGA-202ENST00000334654 STRN4Q9NRL3 753 aa23.5■■□□□ 1.35
CHGA-202ENST00000334654 NBPF6Q5VWK0 638 aa23.49■■□□□ 1.35
CHGA-202ENST00000334654 NBPF4Q96M43 638 aa23.49■■□□□ 1.35
CHGA-202ENST00000334654 EYA1Q99502 592 aa23.49■■□□□ 1.35
CHGA-202ENST00000334654 USP21Q9UK80 565 aa23.49■■□□□ 1.35
CHGA-202ENST00000334654 FAM208AQ9UK61 1670 aaKnown RBP23.49■■□□□ 1.35
CHGA-202ENST00000334654 EVA1CP58658 441 aa23.49■■□□□ 1.35
CHGA-202ENST00000334654 MRS2Q9HD23 443 aa23.49■■□□□ 1.35
CHGA-202ENST00000334654 NCAPD2Q15021 1401 aa23.47■■□□□ 1.35
CHGA-202ENST00000334654 IGSF1Q8N6C5 1336 aa23.46■■□□□ 1.35
CHGA-202ENST00000334654 CRB1P82279 1406 aa23.46■■□□□ 1.35
CHGA-202ENST00000334654 CSB-PGBD3P0DP91 1061 aa23.45■■□□□ 1.34
CHGA-202ENST00000334654 PNISRQ8TF01 805 aaKnown RBP23.45■■□□□ 1.34
CHGA-202ENST00000334654 VPS72Q15906 364 aa23.44■■□□□ 1.34
CHGA-202ENST00000334654 CARD10Q9BWT7 1032 aa23.44■■□□□ 1.34
CHGA-202ENST00000334654 NLRP2Q9NX02 1062 aa23.44■■□□□ 1.34
CHGA-202ENST00000334654 RGS17Q9UGC6 210 aaPredicted RBP23.44■■□□□ 1.34
CHGA-202ENST00000334654 ATRNO75882 1429 aa23.43■■□□□ 1.34
CHGA-202ENST00000334654 TOM1L2Q6ZVM7 507 aa23.43■■□□□ 1.34
CHGA-202ENST00000334654 SPATA31A5Q5VU36 1347 aa23.43■■□□□ 1.34
CHGA-202ENST00000334654 SPATA31A7Q8IWB4 1347 aa23.43■■□□□ 1.34
CHGA-202ENST00000334654 USHBP1Q8N6Y0 703 aa23.43■■□□□ 1.34
CHGA-202ENST00000334654 NUDCQ9Y266 331 aa23.43■■□□□ 1.34
CHGA-202ENST00000334654 U2SURPO15042 1029 aaKnown RBP23.42■■□□□ 1.34
CHGA-202ENST00000334654 SPATA31A1Q5TZJ5 1347 aa23.41■■□□□ 1.34
CHGA-202ENST00000334654 AEBP1Q8IUX7 1158 aa23.41■■□□□ 1.34
CHGA-202ENST00000334654 KDRP35968 1356 aa23.41■■□□□ 1.34
CHGA-202ENST00000334654 U2AF1L5P0DN76 240 aaPredicted RBP23.39■■□□□ 1.34
CHGA-202ENST00000334654 U2AF1Q01081 240 aaKnown RBP eCLIP23.39■■□□□ 1.34
CHGA-202ENST00000334654 SULT6B1Q6IMI4 303 aa23.39■■□□□ 1.34
CHGA-202ENST00000334654 QTRT2Q9H974 415 aaKnown RBP23.39■■□□□ 1.34
CHGA-202ENST00000334654 TRPC5Q9UL62 973 aaPredicted RBP23.39■■□□□ 1.34
CHGA-202ENST00000334654 ADAMTS8Q9UP79 889 aa23.39■■□□□ 1.34
CHGA-202ENST00000334654 GLI3P10071 1580 aa23.39■■□□□ 1.33
CHGA-202ENST00000334654 HMOX1P09601 288 aa23.38■■□□□ 1.33
CHGA-202ENST00000334654 ZNF772Q68DY9 489 aaPredicted RBP23.38■■□□□ 1.33
CHGA-202ENST00000334654 USP35Q9P2H5 1018 aa23.37■■□□□ 1.33
CHGA-202ENST00000334654 GJD4Q96KN9 370 aaPredicted RBP23.36■■□□□ 1.33
CHGA-202ENST00000334654 RSPH6AQ9H0K4 717 aa23.36■■□□□ 1.33
CHGA-202ENST00000334654 TCP11L2Q8N4U5 519 aa23.36■■□□□ 1.33
CHGA-202ENST00000334654 WNK3Q9BYP7 1800 aa23.35■■□□□ 1.33
CHGA-202ENST00000334654 FCHSD2O94868 740 aa23.35■■□□□ 1.33
CHGA-202ENST00000334654 WDR43Q15061 677 aaKnown RBP eCLIP23.35■■□□□ 1.33
CHGA-202ENST00000334654 THRAP3Q9Y2W1 955 aaKnown RBP23.35■■□□□ 1.33
CHGA-202ENST00000334654 CCDC9Q9Y3X0 531 aaKnown RBP23.35■■□□□ 1.33
CHGA-202ENST00000334654 DISP2A7MBM2 1401 aa23.34■■□□□ 1.33
CHGA-202ENST00000334654 POTEAQ6S8J7 498 aa23.33■■□□□ 1.33
CHGA-202ENST00000334654 BARGINQ6ZT62 677 aa23.33■■□□□ 1.33
CHGA-202ENST00000334654 PLEKHF1Q96S99 279 aa23.33■■□□□ 1.33
CHGA-202ENST00000334654 MEGF6O75095 1541 aa23.33■■□□□ 1.33
CHGA-202ENST00000334654 FAM9BQ8IZU0 186 aa23.31■■□□□ 1.32
CHGA-202ENST00000334654 ONECUT3O60422 494 aaPredicted RBP23.3■■□□□ 1.32
CHGA-202ENST00000334654 PRKAR2BP31323 418 aa23.3■■□□□ 1.32
CHGA-202ENST00000334654 PHF23Q9BUL5 403 aaPredicted RBP23.3■■□□□ 1.32
CHGA-202ENST00000334654 IL2RBP14784 551 aa23.3■■□□□ 1.32
CHGA-202ENST00000334654 FAM98CQ17RN3 349 aaKnown RBP23.29■■□□□ 1.32
CHGA-202ENST00000334654 PHACTR3Q96KR7 559 aa23.29■■□□□ 1.32
CHGA-202ENST00000334654 PARP4Q9UKK3 1724 aaKnown RBP23.28■■□□□ 1.32
CHGA-202ENST00000334654 OVOS2A0A0G2JMS6 1433 aa23.28■■□□□ 1.32
CHGA-202ENST00000334654 THSD7AQ9UPZ6 1657 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms