RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 GTF2A1P52655 376 aaPredicted RBP11.58□□□□□ -0.56
COL4A6-201ENST00000334504 DNAJC2Q99543 621 aaKnown RBP11.58□□□□□ -0.56
COL4A6-201ENST00000334504 CYP46A1Q9Y6A2 500 aa11.58□□□□□ -0.56
COL4A6-201ENST00000334504 SF3B2Q13435 895 aaKnown RBP11.57□□□□□ -0.56
COL4A6-201ENST00000334504 KIAA1328Q86T90 577 aa11.57□□□□□ -0.56
COL4A6-201ENST00000334504 ABCC8Q09428 1581 aa11.57□□□□□ -0.56
COL4A6-201ENST00000334504 ZFP91Q96JP5 570 aaPredicted RBP11.57□□□□□ -0.56
COL4A6-201ENST00000334504 EPB41L2O43491 1005 aaKnown RBP11.57□□□□□ -0.56
COL4A6-201ENST00000334504 LARP1BQ659C4 914 aaKnown RBP11.57□□□□□ -0.56
COL4A6-201ENST00000334504 KRT18P05783 430 aaKnown RBP11.57□□□□□ -0.56
COL4A6-201ENST00000334504 GCC1Q96CN9 775 aa11.57□□□□□ -0.56
COL4A6-201ENST00000334504 KIF2AO00139 706 aaPredicted RBP11.57□□□□□ -0.56
COL4A6-201ENST00000334504 ARHGAP29Q52LW3 1261 aa11.57□□□□□ -0.56
COL4A6-201ENST00000334504 PIP4K2BP78356 416 aa11.56□□□□□ -0.56
COL4A6-201ENST00000334504 TDRD9Q8NDG6 1382 aaKnown RBP11.56□□□□□ -0.56
COL4A6-201ENST00000334504 NUTM2BA6NNL0 878 aaPredicted RBP11.56□□□□□ -0.56
COL4A6-201ENST00000334504 NUTM2EB1AL46 878 aaPredicted RBP11.56□□□□□ -0.56
COL4A6-201ENST00000334504 CAMK4Q16566 473 aa11.56□□□□□ -0.56
COL4A6-201ENST00000334504 MICALCLQ6ZW33 695 aa11.56□□□□□ -0.56
COL4A6-201ENST00000334504 NUTM2AQ8IVF1 878 aaPredicted RBP11.56□□□□□ -0.56
COL4A6-201ENST00000334504 FAM107BQ9H098 131 aa11.56□□□□□ -0.56
COL4A6-201ENST00000334504 ADAMTS8Q9UP79 889 aa11.56□□□□□ -0.56
COL4A6-201ENST00000334504 HMOX1P09601 288 aa11.56□□□□□ -0.56
COL4A6-201ENST00000334504 SART3Q15020 963 aaKnown RBP11.56□□□□□ -0.56
COL4A6-201ENST00000334504 KIF18AQ8NI77 898 aa11.56□□□□□ -0.56
COL4A6-201ENST00000334504 TIGD1Q96MW7 591 aa11.56□□□□□ -0.56
COL4A6-201ENST00000334504 URI1O94763 535 aaPredicted RBP11.56□□□□□ -0.56
COL4A6-201ENST00000334504 STIM1Q13586 685 aa11.56□□□□□ -0.56
COL4A6-201ENST00000334504 SMTNL1A8MU46 457 aa11.56□□□□□ -0.56
COL4A6-201ENST00000334504 SURF6O75683 361 aaKnown RBP11.55□□□□□ -0.56
COL4A6-201ENST00000334504 NF2P35240 595 aa11.55□□□□□ -0.56
COL4A6-201ENST00000334504 HIP1O00291 1037 aa11.55□□□□□ -0.56
COL4A6-201ENST00000334504 MAP3K11Q16584 847 aa11.55□□□□□ -0.56
COL4A6-201ENST00000334504 MAP9Q49MG5 647 aa11.55□□□□□ -0.56
COL4A6-201ENST00000334504 CCDC113Q9H0I3 377 aa11.55□□□□□ -0.56
COL4A6-201ENST00000334504 BRD4O60885 1362 aaPredicted RBP11.55□□□□□ -0.56
COL4A6-201ENST00000334504 RIC3Q7Z5B4 369 aa11.55□□□□□ -0.56
COL4A6-201ENST00000334504 TAF4BQ92750 862 aa11.55□□□□□ -0.56
COL4A6-201ENST00000334504 IRX3P78415 501 aaPredicted RBP11.54□□□□□ -0.56
COL4A6-201ENST00000334504 AIMP1Q12904 312 aaKnown RBP11.54□□□□□ -0.56
COL4A6-201ENST00000334504 JAKMIP3Q5VZ66 844 aa11.54□□□□□ -0.56
COL4A6-201ENST00000334504 MAP4K4O95819 1239 aaPredicted RBP11.54□□□□□ -0.56
COL4A6-201ENST00000334504 ANKRD1Q15327 319 aa11.54□□□□□ -0.56
COL4A6-201ENST00000334504 TMX1Q9H3N1 280 aa11.54□□□□□ -0.56
COL4A6-201ENST00000334504 SEPT11Q9NVA2 429 aaKnown RBP11.54□□□□□ -0.56
COL4A6-201ENST00000334504 CCDC18Q5T9S5 1454 aa11.54□□□□□ -0.56
COL4A6-201ENST00000334504 MINK1Q8N4C8 1332 aaPredicted RBP11.54□□□□□ -0.56
COL4A6-201ENST00000334504 BCAR3O75815 825 aa11.53□□□□□ -0.56
COL4A6-201ENST00000334504 CFAP100Q494V2 611 aa11.53□□□□□ -0.56
COL4A6-201ENST00000334504 FAM177BA6PVY3 158 aa11.53□□□□□ -0.56
COL4A6-201ENST00000334504 ZSCAN12O43309 604 aa11.53□□□□□ -0.56
COL4A6-201ENST00000334504 LMAN1P49257 510 aa11.53□□□□□ -0.56
COL4A6-201ENST00000334504 NOB1Q9ULX3 412 aaKnown RBP11.53□□□□□ -0.56
COL4A6-201ENST00000334504 MNAT1P51948 309 aa11.53□□□□□ -0.56
COL4A6-201ENST00000334504 CCDC91Q7Z6B0 441 aa11.53□□□□□ -0.56
COL4A6-201ENST00000334504 WASHC2CQ9Y4E1 1318 aa11.52□□□□□ -0.56
COL4A6-201ENST00000334504 DYNC1I1O14576 645 aa11.52□□□□□ -0.56
COL4A6-201ENST00000334504 PDE3AQ14432 1141 aa11.52□□□□□ -0.56
COL4A6-201ENST00000334504 C16orf45Q96MC5 204 aaPredicted RBP11.52□□□□□ -0.56
COL4A6-201ENST00000334504 BCCIPQ9P287 314 aaKnown RBP eCLIP11.52□□□□□ -0.56
COL4A6-201ENST00000334504 SFPQP23246 707 aaKnown RBP eCLIP11.52□□□□□ -0.57
COL4A6-201ENST00000334504 UACAQ9BZF9 1416 aa11.52□□□□□ -0.57
COL4A6-201ENST00000334504 DNAAF4Q8WXU2 420 aa11.52□□□□□ -0.57
COL4A6-201ENST00000334504 TRMT1Q9NXH9 659 aaKnown RBP11.52□□□□□ -0.57
COL4A6-201ENST00000334504 MCM3P25205 808 aa11.52□□□□□ -0.57
COL4A6-201ENST00000334504 PDRG1Q9NUG6 133 aa11.52□□□□□ -0.57
COL4A6-201ENST00000334504 CLIP2Q9UDT6 1046 aa11.52□□□□□ -0.57
COL4A6-201ENST00000334504 KIF5CO60282 957 aa11.51□□□□□ -0.57
COL4A6-201ENST00000334504 EXOSC9Q06265 439 aaKnown RBP11.51□□□□□ -0.57
COL4A6-201ENST00000334504 ZHX3Q9H4I2 956 aa11.51□□□□□ -0.57
COL4A6-201ENST00000334504 GNAI3P08754 354 aa11.51□□□□□ -0.57
COL4A6-201ENST00000334504 KIF4BQ2VIQ3 1234 aa11.51□□□□□ -0.57
COL4A6-201ENST00000334504 CEP63Q96MT8 703 aa11.51□□□□□ -0.57
COL4A6-201ENST00000334504 WDR70Q9NW82 654 aa11.51□□□□□ -0.57
COL4A6-201ENST00000334504 EIF5P55010 431 aaKnown RBP11.51□□□□□ -0.57
COL4A6-201ENST00000334504 TMEM132AQ24JP5 1023 aa11.51□□□□□ -0.57
COL4A6-201ENST00000334504 SMARCC1Q92922 1105 aaPredicted RBP11.51□□□□□ -0.57
COL4A6-201ENST00000334504 RAI14Q9P0K7 980 aa11.51□□□□□ -0.57
COL4A6-201ENST00000334504 CCDC88BA6NC98 1476 aa11.51□□□□□ -0.57
COL4A6-201ENST00000334504 CCDC183Q5T5S1 534 aa11.5□□□□□ -0.57
COL4A6-201ENST00000334504 PAXIP1Q6ZW49 1069 aaPredicted RBP11.5□□□□□ -0.57
COL4A6-201ENST00000334504 OSCARQ8IYS5 282 aa11.5□□□□□ -0.57
COL4A6-201ENST00000334504 TBC1D2BQ9UPU7 963 aa11.5□□□□□ -0.57
COL4A6-201ENST00000334504 NBPF1Q3BBV0 1214 aa11.5□□□□□ -0.57
COL4A6-201ENST00000334504 CHD1LQ86WJ1 897 aa11.5□□□□□ -0.57
COL4A6-201ENST00000334504 IFFO1Q0D2I5 559 aa11.49□□□□□ -0.57
COL4A6-201ENST00000334504 IKQ13123 557 aaPredicted RBP11.49□□□□□ -0.57
COL4A6-201ENST00000334504 PAF1Q8N7H5 531 aa11.49□□□□□ -0.57
COL4A6-201ENST00000334504 USP25Q9UHP3 1055 aa11.49□□□□□ -0.57
COL4A6-201ENST00000334504 WASHC2AQ641Q2 1341 aa11.49□□□□□ -0.57
COL4A6-201ENST00000334504 CTR9Q6PD62 1173 aa11.49□□□□□ -0.57
COL4A6-201ENST00000334504 BMS1Q14692 1282 aaKnown RBP11.49□□□□□ -0.57
COL4A6-201ENST00000334504 GOPCQ9HD26 462 aa11.49□□□□□ -0.57
COL4A6-201ENST00000334504 TCP11L2Q8N4U5 519 aa11.49□□□□□ -0.57
COL4A6-201ENST00000334504 ZSCAN31Q96LW9 406 aaPredicted RBP11.49□□□□□ -0.57
COL4A6-201ENST00000334504 FHOD3Q2V2M9 1422 aa11.49□□□□□ -0.57
COL4A6-201ENST00000334504 JAKMIP1Q96N16 626 aaKnown RBP11.49□□□□□ -0.57
COL4A6-201ENST00000334504 GNAI2P04899 355 aa11.48□□□□□ -0.57
COL4A6-201ENST00000334504 PPP6R1Q9UPN7 881 aa11.48□□□□□ -0.57
COL4A6-201ENST00000334504 SMC1AQ14683 1233 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms