RNA–Protein interactions for RNA: ENST00000333861.4

CCDC87-201, Transcript of coiled-coil domain containing 87, humanhuman

APPRIS P1 BASIC

Gene CCDC87, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC87-201ENST00000333861 HMOX1P09601 288 aa13.73□□□□□ -0.21
CCDC87-201ENST00000333861 ZSCAN20P17040 1043 aaPredicted RBP13.73□□□□□ -0.21
CCDC87-201ENST00000333861 TSPYL6Q8N831 410 aa13.73□□□□□ -0.21
CCDC87-201ENST00000333861 STAG3Q9UJ98 1225 aa13.73□□□□□ -0.21
CCDC87-201ENST00000333861 PIK3C2GO75747 1445 aa13.73□□□□□ -0.21
CCDC87-201ENST00000333861 VGLL3A8MV65 326 aa13.73□□□□□ -0.21
CCDC87-201ENST00000333861 ZBTB22O15209 634 aa13.73□□□□□ -0.21
CCDC87-201ENST00000333861 PLCB2Q00722 1185 aa13.73□□□□□ -0.21
CCDC87-201ENST00000333861 ARHGEF40Q8TER5 1519 aa13.72□□□□□ -0.21
CCDC87-201ENST00000333861 K7ELQ4 463 aaPredicted RBP13.72□□□□□ -0.21
CCDC87-201ENST00000333861 CEBPAP49715 358 aaPredicted RBP13.72□□□□□ -0.21
CCDC87-201ENST00000333861 LARP6Q9BRS8 491 aaKnown RBP13.72□□□□□ -0.21
CCDC87-201ENST00000333861 PDE4CQ08493 712 aa13.72□□□□□ -0.21
CCDC87-201ENST00000333861 KLHL40Q2TBA0 621 aa13.72□□□□□ -0.21
CCDC87-201ENST00000333861 LMTK2Q8IWU2 1503 aa13.72□□□□□ -0.21
CCDC87-201ENST00000333861 SYNMO15061 1565 aa13.72□□□□□ -0.21
CCDC87-201ENST00000333861 PTMAP06454 111 aaKnown RBP13.71□□□□□ -0.21
CCDC87-201ENST00000333861 MAP7D2Q96T17 732 aa13.71□□□□□ -0.21
CCDC87-201ENST00000333861 ZKSCAN5Q9Y2L8 839 aa13.71□□□□□ -0.21
CCDC87-201ENST00000333861 TRIM35Q9UPQ4 493 aa13.7□□□□□ -0.22
CCDC87-201ENST00000333861 ATP2B3Q16720 1220 aa13.7□□□□□ -0.22
CCDC87-201ENST00000333861 GPT2Q8TD30 523 aa13.7□□□□□ -0.22
CCDC87-201ENST00000333861 RBM25P49756 843 aaKnown RBP13.7□□□□□ -0.22
CCDC87-201ENST00000333861 DMTNQ08495 405 aa13.7□□□□□ -0.22
CCDC87-201ENST00000333861 ZBTB40Q9NUA8 1239 aa13.7□□□□□ -0.22
CCDC87-201ENST00000333861 CAMSAP1Q5T5Y3 1602 aa13.69□□□□□ -0.22
CCDC87-201ENST00000333861 NCOA3Q9Y6Q9 1424 aa13.69□□□□□ -0.22
CCDC87-201ENST00000333861 DYNC1I1O14576 645 aa13.69□□□□□ -0.22
CCDC87-201ENST00000333861 ZNF500O60304 480 aaPredicted RBP13.69□□□□□ -0.22
CCDC87-201ENST00000333861 NUCB1Q02818 461 aa13.69□□□□□ -0.22
CCDC87-201ENST00000333861 CHMP4BQ9H444 224 aaKnown RBP13.69□□□□□ -0.22
CCDC87-201ENST00000333861 DCTN1Q14203 1278 aa13.69□□□□□ -0.22
CCDC87-201ENST00000333861 SNX21Q969T3 373 aa13.69□□□□□ -0.22
CCDC87-201ENST00000333861 CCDC94Q9BW85 323 aaPredicted RBP13.69□□□□□ -0.22
CCDC87-201ENST00000333861 DDX19BQ9UMR2 479 aa13.69□□□□□ -0.22
CCDC87-201ENST00000333861 TMPOP42166 694 aaKnown RBP13.68□□□□□ -0.22
CCDC87-201ENST00000333861 SIRT2Q8IXJ6 389 aa13.68□□□□□ -0.22
CCDC87-201ENST00000333861 GSPT1P15170 499 aaKnown RBP13.68□□□□□ -0.22
CCDC87-201ENST00000333861 KRT24Q2M2I5 525 aa13.68□□□□□ -0.22
CCDC87-201ENST00000333861 PPP4R3BQ5MIZ7 849 aa13.68□□□□□ -0.22
CCDC87-201ENST00000333861 SASS6Q6UVJ0 657 aa13.68□□□□□ -0.22
CCDC87-201ENST00000333861 ZNF710Q8N1W2 664 aa13.68□□□□□ -0.22
CCDC87-201ENST00000333861 LMBRD1Q9NUN5 540 aa13.68□□□□□ -0.22
CCDC87-201ENST00000333861 GTF2E1P29083 439 aaPredicted RBP13.67□□□□□ -0.22
CCDC87-201ENST00000333861 TMEM63CQ9P1W3 806 aa13.67□□□□□ -0.22
CCDC87-201ENST00000333861 CIZ1Q9ULV3 898 aaPredicted RBP13.67□□□□□ -0.22
CCDC87-201ENST00000333861 SCAF11Q99590 1463 aaKnown RBP13.67□□□□□ -0.22
CCDC87-201ENST00000333861 AGLP35573 1532 aa13.67□□□□□ -0.22
CCDC87-201ENST00000333861 ZMYM3Q14202 1370 aa13.67□□□□□ -0.22
CCDC87-201ENST00000333861 ERVK-7P63135 1459 aa13.67□□□□□ -0.22
CCDC87-201ENST00000333861 WDR63Q8IWG1 891 aa13.67□□□□□ -0.22
CCDC87-201ENST00000333861 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.67□□□□□ -0.22
CCDC87-201ENST00000333861 CFAP53Q96M91 514 aa13.67□□□□□ -0.22
CCDC87-201ENST00000333861 NOS1P29475 1434 aa13.66□□□□□ -0.22
CCDC87-201ENST00000333861 CLTCQ00610 1675 aaKnown RBP13.65□□□□□ -0.22
CCDC87-201ENST00000333861 FAM83GA6ND36 823 aa13.65□□□□□ -0.22
CCDC87-201ENST00000333861 SLC52A1Q9NWF4 448 aa13.65□□□□□ -0.22
CCDC87-201ENST00000333861 PPP6R1Q9UPN7 881 aa13.65□□□□□ -0.22
CCDC87-201ENST00000333861 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.65□□□□□ -0.22
CCDC87-201ENST00000333861 LAMC1P11047 1609 aa13.65□□□□□ -0.22
CCDC87-201ENST00000333861 TERF1P54274 439 aa13.65□□□□□ -0.22
CCDC87-201ENST00000333861 HDAC1Q13547 482 aaPredicted RBP13.65□□□□□ -0.22
CCDC87-201ENST00000333861 PLCD3Q8N3E9 789 aa13.65□□□□□ -0.22
CCDC87-201ENST00000333861 PDLIM2Q96JY6 352 aa13.65□□□□□ -0.22
CCDC87-201ENST00000333861 ZNF445P59923 1031 aa13.64□□□□□ -0.23
CCDC87-201ENST00000333861 TTC12Q9H892 705 aaPredicted RBP13.64□□□□□ -0.23
CCDC87-201ENST00000333861 ARHGAP31Q2M1Z3 1444 aa13.64□□□□□ -0.23
CCDC87-201ENST00000333861 ZDHHC9Q9Y397 364 aa13.64□□□□□ -0.23
CCDC87-201ENST00000333861 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.63□□□□□ -0.23
CCDC87-201ENST00000333861 STAC3Q96MF2 364 aa13.63□□□□□ -0.23
CCDC87-201ENST00000333861 REREQ9P2R6 1566 aa13.63□□□□□ -0.23
CCDC87-201ENST00000333861 SRPK2P78362 688 aaKnown RBP13.63□□□□□ -0.23
CCDC87-201ENST00000333861 PHACTR3Q96KR7 559 aa13.63□□□□□ -0.23
CCDC87-201ENST00000333861 MYOM1P52179 1685 aa13.63□□□□□ -0.23
CCDC87-201ENST00000333861 NINLQ9Y2I6 1382 aa13.63□□□□□ -0.23
CCDC87-201ENST00000333861 MADDQ8WXG6 1647 aa13.62□□□□□ -0.23
CCDC87-201ENST00000333861 GADD45BO75293 160 aaPredicted RBP13.62□□□□□ -0.23
CCDC87-201ENST00000333861 POLR3AO14802 1390 aaPredicted RBP13.62□□□□□ -0.23
CCDC87-201ENST00000333861 KIF1BO60333 1816 aa13.62□□□□□ -0.23
CCDC87-201ENST00000333861 MINK1Q8N4C8 1332 aaPredicted RBP13.62□□□□□ -0.23
CCDC87-201ENST00000333861 U2AF2P26368 475 aaKnown RBP eCLIP13.61□□□□□ -0.23
CCDC87-201ENST00000333861 CSPP1Q1MSJ5 1256 aa13.61□□□□□ -0.23
CCDC87-201ENST00000333861 ZNF428Q96B54 188 aa13.61□□□□□ -0.23
CCDC87-201ENST00000333861 CGNQ9P2M7 1197 aaKnown RBP13.61□□□□□ -0.23
CCDC87-201ENST00000333861 PPIP5K1Q6PFW1 1433 aa13.61□□□□□ -0.23
CCDC87-201ENST00000333861 MROH2AA6NES4 1674 aa13.61□□□□□ -0.23
CCDC87-201ENST00000333861 PHF23Q9BUL5 403 aaPredicted RBP13.61□□□□□ -0.23
CCDC87-201ENST00000333861 KIF16BQ96L93 1317 aa13.61□□□□□ -0.23
CCDC87-201ENST00000333861 ZC3H13Q5T200 1668 aaKnown RBP13.6□□□□□ -0.23
CCDC87-201ENST00000333861 SOX12O15370 315 aa13.6□□□□□ -0.23
CCDC87-201ENST00000333861 PRKAR2BP31323 418 aa13.6□□□□□ -0.23
CCDC87-201ENST00000333861 CCDC39Q9UFE4 941 aa13.6□□□□□ -0.23
CCDC87-201ENST00000333861 CHMP3Q9Y3E7 222 aa13.6□□□□□ -0.23
CCDC87-201ENST00000333861 ZBTB7BO15156 539 aaPredicted RBP13.6□□□□□ -0.23
CCDC87-201ENST00000333861 KIAA2012Q0VF49 1180 aa13.6□□□□□ -0.23
CCDC87-201ENST00000333861 VGFO15240 615 aaPredicted RBP13.59□□□□□ -0.23
CCDC87-201ENST00000333861 AEBP2Q6ZN18 517 aaPredicted RBP13.59□□□□□ -0.23
CCDC87-201ENST00000333861 PREX1Q8TCU6 1659 aa13.59□□□□□ -0.23
CCDC87-201ENST00000333861 DDX54Q8TDD1 881 aaKnown RBP13.59□□□□□ -0.23
CCDC87-201ENST00000333861 UPF3BQ9BZI7 483 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms