RNA–Protein interactions for RNA: ENST00000333617.8

LSAMP-201, Transcript of limbic system associated membrane protein, humanhuman

TSL 2

Gene LSAMP, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-201ENST00000333617 KNDC1Q76NI1 1749 aa11.62□□□□□ -0.55
LSAMP-201ENST00000333617 NSD3Q9BZ95 1437 aa11.62□□□□□ -0.55
LSAMP-201ENST00000333617 ERICH6BQ5W0A0 696 aa11.62□□□□□ -0.55
LSAMP-201ENST00000333617 C3P01024 1663 aa11.61□□□□□ -0.55
LSAMP-201ENST00000333617 SENP3-EIF4A1A0A087X0R7 540 aa11.61□□□□□ -0.55
LSAMP-201ENST00000333617 PTCD2Q8WV60 388 aaKnown RBP11.61□□□□□ -0.55
LSAMP-201ENST00000333617 SLC12A5Q9H2X9 1139 aa11.61□□□□□ -0.55
LSAMP-201ENST00000333617 DLC1Q96QB1 1528 aa11.61□□□□□ -0.55
LSAMP-201ENST00000333617 IRX6P78412 446 aaPredicted RBP11.6□□□□□ -0.55
LSAMP-201ENST00000333617 WDR43Q15061 677 aaKnown RBP eCLIP11.6□□□□□ -0.55
LSAMP-201ENST00000333617 CRISPLD2Q9H0B8 497 aa11.6□□□□□ -0.55
LSAMP-201ENST00000333617 KIF20BQ96Q89 1820 aa11.6□□□□□ -0.55
LSAMP-201ENST00000333617 TNRQ92752 1358 aa11.6□□□□□ -0.55
LSAMP-201ENST00000333617 PDE3BQ13370 1112 aa11.59□□□□□ -0.55
LSAMP-201ENST00000333617 SAFB2Q14151 953 aaKnown RBP eCLIP11.59□□□□□ -0.55
LSAMP-201ENST00000333617 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.59□□□□□ -0.55
LSAMP-201ENST00000333617 POGKQ9P215 609 aa11.59□□□□□ -0.55
LSAMP-201ENST00000333617 NINLQ9Y2I6 1382 aa11.59□□□□□ -0.55
LSAMP-201ENST00000333617 PDE4AP27815 886 aa11.58□□□□□ -0.55
LSAMP-201ENST00000333617 PRAM1Q96QH2 718 aa11.58□□□□□ -0.55
LSAMP-201ENST00000333617 ANKRD36BQ8N2N9 1353 aa11.58□□□□□ -0.56
LSAMP-201ENST00000333617 ADAMTS8Q9UP79 889 aa11.58□□□□□ -0.56
LSAMP-201ENST00000333617 SALL2Q9Y467 1007 aaPredicted RBP11.58□□□□□ -0.56
LSAMP-201ENST00000333617 SHPRHQ149N8 1683 aa11.57□□□□□ -0.56
LSAMP-201ENST00000333617 TBC1D12O60347 775 aa11.57□□□□□ -0.56
LSAMP-201ENST00000333617 HDGFP51858 240 aaKnown RBP11.57□□□□□ -0.56
LSAMP-201ENST00000333617 LHX6Q9UPM6 363 aa11.57□□□□□ -0.56
LSAMP-201ENST00000333617 CGNL1Q0VF96 1302 aa11.57□□□□□ -0.56
LSAMP-201ENST00000333617 MINK1Q8N4C8 1332 aaPredicted RBP11.57□□□□□ -0.56
LSAMP-201ENST00000333617 SRPK2P78362 688 aaKnown RBP11.56□□□□□ -0.56
LSAMP-201ENST00000333617 ATAD2Q6PL18 1390 aa11.56□□□□□ -0.56
LSAMP-201ENST00000333617 MORC1Q86VD1 984 aa11.56□□□□□ -0.56
LSAMP-201ENST00000333617 RTN4Q9NQC3 1192 aaKnown RBP11.56□□□□□ -0.56
LSAMP-201ENST00000333617 NSD2O96028 1365 aa11.55□□□□□ -0.56
LSAMP-201ENST00000333617 RNF123Q5XPI4 1314 aa11.55□□□□□ -0.56
LSAMP-201ENST00000333617 BBXQ8WY36 941 aaPredicted RBP11.55□□□□□ -0.56
LSAMP-201ENST00000333617 NLRP1Q9C000 1473 aa11.55□□□□□ -0.56
LSAMP-201ENST00000333617 POLR3AO14802 1390 aaPredicted RBP11.55□□□□□ -0.56
LSAMP-201ENST00000333617 NCKAP5LQ9HCH0 1330 aa11.54□□□□□ -0.56
LSAMP-201ENST00000333617 PPP1R15BQ5SWA1 713 aa11.54□□□□□ -0.56
LSAMP-201ENST00000333617 PPP4R2Q9NY27 417 aa11.54□□□□□ -0.56
LSAMP-201ENST00000333617 ABCC11Q96J66 1382 aa11.54□□□□□ -0.56
LSAMP-201ENST00000333617 MAP2P11137 1827 aaKnown RBP11.53□□□□□ -0.56
LSAMP-201ENST00000333617 ITSN1Q15811 1721 aa11.53□□□□□ -0.56
LSAMP-201ENST00000333617 A0A1W2PP64 1363 aa11.53□□□□□ -0.56
LSAMP-201ENST00000333617 TMEM2Q9UHN6 1383 aa11.53□□□□□ -0.56
LSAMP-201ENST00000333617 CPS1P31327 1500 aa11.53□□□□□ -0.56
LSAMP-201ENST00000333617 KDM4FA0A1W2PPD8 638 aa11.52□□□□□ -0.57
LSAMP-201ENST00000333617 PSDA5PKW4 1024 aaPredicted RBP11.52□□□□□ -0.57
LSAMP-201ENST00000333617 CDK19Q9BWU1 502 aa11.52□□□□□ -0.57
LSAMP-201ENST00000333617 TERF2IPQ9NYB0 399 aa11.52□□□□□ -0.57
LSAMP-201ENST00000333617 AKAP12Q02952 1782 aa11.51□□□□□ -0.57
LSAMP-201ENST00000333617 CD163L1Q9NR16 1453 aa11.51□□□□□ -0.57
LSAMP-201ENST00000333617 METP08581 1390 aa11.51□□□□□ -0.57
LSAMP-201ENST00000333617 TNNT2P45379 298 aaPredicted RBP11.5□□□□□ -0.57
LSAMP-201ENST00000333617 WAPLQ7Z5K2 1190 aa11.5□□□□□ -0.57
LSAMP-201ENST00000333617 CDCA7LQ96GN5 454 aa11.5□□□□□ -0.57
LSAMP-201ENST00000333617 LARP6Q9BRS8 491 aaKnown RBP11.5□□□□□ -0.57
LSAMP-201ENST00000333617 RCAN3Q9UKA8 241 aa11.5□□□□□ -0.57
LSAMP-201ENST00000333617 MON2Q7Z3U7 1717 aa11.5□□□□□ -0.57
LSAMP-201ENST00000333617 PLEKHH1Q9ULM0 1364 aa11.5□□□□□ -0.57
LSAMP-201ENST00000333617 PBX2P40425 430 aa11.5□□□□□ -0.57
LSAMP-201ENST00000333617 OXER1Q8TDS5 423 aa11.5□□□□□ -0.57
LSAMP-201ENST00000333617 TECPR2O15040 1411 aa11.49□□□□□ -0.57
LSAMP-201ENST00000333617 FAM135BQ49AJ0 1406 aa11.49□□□□□ -0.57
LSAMP-201ENST00000333617 MED14O60244 1454 aa11.49□□□□□ -0.57
LSAMP-201ENST00000333617 ATP7BP35670 1465 aa11.49□□□□□ -0.57
LSAMP-201ENST00000333617 CEBPAP49715 358 aaPredicted RBP11.49□□□□□ -0.57
LSAMP-201ENST00000333617 HDGFL2Q7Z4V5 671 aaPredicted RBP11.49□□□□□ -0.57
LSAMP-201ENST00000333617 SETD1BQ9UPS6 1966 aaKnown RBP11.48□□□□□ -0.57
LSAMP-201ENST00000333617 RIMS1Q86UR5 1692 aaKnown RBP11.48□□□□□ -0.57
LSAMP-201ENST00000333617 CCDC146Q8IYE0 955 aa11.48□□□□□ -0.57
LSAMP-201ENST00000333617 SIRT1Q96EB6 747 aa11.48□□□□□ -0.57
LSAMP-201ENST00000333617 DDX27Q96GQ7 796 aaKnown RBP11.48□□□□□ -0.57
LSAMP-201ENST00000333617 CFAP53Q96M91 514 aa11.48□□□□□ -0.57
LSAMP-201ENST00000333617 SLIT1O75093 1534 aa11.48□□□□□ -0.57
LSAMP-201ENST00000333617 PLEKHG1Q9ULL1 1385 aa11.48□□□□□ -0.57
LSAMP-201ENST00000333617 ZNF521Q96K83 1311 aa11.47□□□□□ -0.57
LSAMP-201ENST00000333617 ADAMTS13Q76LX8 1427 aa11.47□□□□□ -0.57
LSAMP-201ENST00000333617 RRP1P56182 461 aaKnown RBP11.47□□□□□ -0.57
LSAMP-201ENST00000333617 NGEFQ8N5V2 710 aa11.47□□□□□ -0.57
LSAMP-201ENST00000333617 UPF1Q92900 1129 aaKnown RBP eCLIP11.47□□□□□ -0.57
LSAMP-201ENST00000333617 CABP1Q9NZU7 370 aa11.47□□□□□ -0.57
LSAMP-201ENST00000333617 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.47□□□□□ -0.57
LSAMP-201ENST00000333617 MTHFSP49914 203 aa11.46□□□□□ -0.57
LSAMP-201ENST00000333617 MFSD10Q14728 455 aa11.46□□□□□ -0.57
LSAMP-201ENST00000333617 TXNDC2Q86VQ3 553 aa11.46□□□□□ -0.57
LSAMP-201ENST00000333617 TSHZ2Q9NRE2 1034 aa11.46□□□□□ -0.57
LSAMP-201ENST00000333617 ADGRB2O60241 1585 aa11.46□□□□□ -0.57
LSAMP-201ENST00000333617 ARHGAP23Q9P227 1491 aa11.46□□□□□ -0.58
LSAMP-201ENST00000333617 WASLO00401 505 aaPredicted RBP11.45□□□□□ -0.58
LSAMP-201ENST00000333617 APAF1O14727 1248 aa11.45□□□□□ -0.58
LSAMP-201ENST00000333617 EID1Q9Y6B2 187 aa11.45□□□□□ -0.58
LSAMP-201ENST00000333617 TOPAZ1Q8N9V7 1692 aa11.45□□□□□ -0.58
LSAMP-201ENST00000333617 CDC42BPGQ6DT37 1551 aa11.45□□□□□ -0.58
LSAMP-201ENST00000333617 FYB1O15117 783 aa11.45□□□□□ -0.58
LSAMP-201ENST00000333617 LTKP29376 864 aa11.45□□□□□ -0.58
LSAMP-201ENST00000333617 LSM11P83369 360 aaKnown RBP eCLIP11.45□□□□□ -0.58
LSAMP-201ENST00000333617 B4GALNT3Q6L9W6 998 aa11.45□□□□□ -0.58
LSAMP-201ENST00000333617 ANKRD13DQ6ZTN6 518 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms