RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 CABLES1Q8TDN4 633 aa30.79■■■□□ 2.52
TSEN54-201ENST00000333213 RSPH6AQ9H0K4 717 aa30.79■■■□□ 2.52
TSEN54-201ENST00000333213 ARHGEF10O15013 1369 aa30.78■■■□□ 2.52
TSEN54-201ENST00000333213 HMOX1P09601 288 aa30.78■■■□□ 2.52
TSEN54-201ENST00000333213 CRYBG1Q9Y4K1 1723 aa30.77■■■□□ 2.52
TSEN54-201ENST00000333213 PHRF1Q9P1Y6 1649 aaKnown RBP30.77■■■□□ 2.52
TSEN54-201ENST00000333213 TCP11L2Q8N4U5 519 aa30.77■■■□□ 2.52
TSEN54-201ENST00000333213 RGPD1P0DJD0 1748 aa30.76■■■□□ 2.52
TSEN54-201ENST00000333213 FCHSD2O94868 740 aa30.76■■■□□ 2.51
TSEN54-201ENST00000333213 SUPT16HQ9Y5B9 1047 aaKnown RBP30.76■■■□□ 2.51
TSEN54-201ENST00000333213 RTL1A6NKG5 1358 aa30.76■■■□□ 2.51
TSEN54-201ENST00000333213 IP6K1Q92551 441 aa30.75■■■□□ 2.51
TSEN54-201ENST00000333213 ZNF521Q96K83 1311 aa30.75■■■□□ 2.51
TSEN54-201ENST00000333213 RRP7AQ9Y3A4 280 aaKnown RBP30.73■■■□□ 2.51
TSEN54-201ENST00000333213 ZBTB7CA1YPR0 619 aa30.72■■■□□ 2.51
TSEN54-201ENST00000333213 PRKAR2BP31323 418 aa30.72■■■□□ 2.51
TSEN54-201ENST00000333213 ZC3H6P61129 1189 aaKnown RBP30.72■■■□□ 2.51
TSEN54-201ENST00000333213 AEBP1Q8IUX7 1158 aa30.72■■■□□ 2.51
TSEN54-201ENST00000333213 CDCA7LQ96GN5 454 aa30.71■■■□□ 2.51
TSEN54-201ENST00000333213 AHDC1Q5TGY3 1603 aaPredicted RBP30.7■■■□□ 2.5
TSEN54-201ENST00000333213 EYA1Q99502 592 aa30.69■■■□□ 2.5
TSEN54-201ENST00000333213 NEUROD2Q15784 382 aa30.69■■■□□ 2.5
TSEN54-201ENST00000333213 SULT6B1Q6IMI4 303 aa30.69■■■□□ 2.5
TSEN54-201ENST00000333213 PHACTR3Q96KR7 559 aa30.69■■■□□ 2.5
TSEN54-201ENST00000333213 AXIN2Q9Y2T1 843 aa30.69■■■□□ 2.5
TSEN54-201ENST00000333213 TOM1O60784 492 aa30.67■■■□□ 2.5
TSEN54-201ENST00000333213 LTV1Q96GA3 475 aaPredicted RBP30.67■■■□□ 2.5
TSEN54-201ENST00000333213 PHF23Q9BUL5 403 aaPredicted RBP30.67■■■□□ 2.5
TSEN54-201ENST00000333213 IGSF1Q8N6C5 1336 aa30.66■■■□□ 2.5
TSEN54-201ENST00000333213 PNNQ9H307 717 aaKnown RBP30.66■■■□□ 2.5
TSEN54-201ENST00000333213 MAPK8IP3Q9UPT6 1336 aa30.65■■■□□ 2.5
TSEN54-201ENST00000333213 TMPOP42166 694 aaKnown RBP30.65■■■□□ 2.5
TSEN54-201ENST00000333213 PDE3BQ13370 1112 aa30.65■■■□□ 2.5
TSEN54-201ENST00000333213 WWC1Q8IX03 1113 aa30.65■■■□□ 2.5
TSEN54-201ENST00000333213 NGEFQ8N5V2 710 aa30.65■■■□□ 2.5
TSEN54-201ENST00000333213 PIP4K2BP78356 416 aa30.63■■■□□ 2.49
TSEN54-201ENST00000333213 KDRP35968 1356 aa30.63■■■□□ 2.49
TSEN54-201ENST00000333213 COL18A1P39060 1754 aa30.62■■■□□ 2.49
TSEN54-201ENST00000333213 ABCA3Q99758 1704 aa30.61■■■□□ 2.49
TSEN54-201ENST00000333213 KIAA0232Q92628 1395 aa30.61■■■□□ 2.49
TSEN54-201ENST00000333213 UBAP1LF5GYI3 381 aa30.61■■■□□ 2.49
TSEN54-201ENST00000333213 LRRC59Q96AG4 307 aaKnown RBP30.61■■■□□ 2.49
TSEN54-201ENST00000333213 CPDO75976 1380 aa30.6■■■□□ 2.49
TSEN54-201ENST00000333213 RGPD5Q99666 1765 aa30.6■■■□□ 2.49
TSEN54-201ENST00000333213 CCDC27Q2M243 656 aa30.6■■■□□ 2.49
TSEN54-201ENST00000333213 SPINK5Q9NQ38 1064 aaPredicted RBP30.6■■■□□ 2.49
TSEN54-201ENST00000333213 NCBP3Q53F19 620 aaKnown RBP30.59■■■□□ 2.49
TSEN54-201ENST00000333213 CHRNA2Q15822 529 aa30.59■■■□□ 2.49
TSEN54-201ENST00000333213 TRIM35Q9UPQ4 493 aa30.59■■■□□ 2.49
TSEN54-201ENST00000333213 NBPF6Q5VWK0 638 aa30.58■■■□□ 2.49
TSEN54-201ENST00000333213 CERKQ8TCT0 537 aa30.58■■■□□ 2.49
TSEN54-201ENST00000333213 NBPF4Q96M43 638 aa30.58■■■□□ 2.49
TSEN54-201ENST00000333213 GOLGA2Q08379 1002 aa30.57■■■□□ 2.48
TSEN54-201ENST00000333213 ANKRD24Q8TF21 1146 aa30.57■■■□□ 2.48
TSEN54-201ENST00000333213 RGPD2P0DJD1 1756 aa30.56■■■□□ 2.48
TSEN54-201ENST00000333213 COL16A1Q07092 1604 aaPredicted RBP30.56■■■□□ 2.48
TSEN54-201ENST00000333213 RIPK4P57078 832 aa30.56■■■□□ 2.48
TSEN54-201ENST00000333213 USHBP1Q8N6Y0 703 aa30.55■■■□□ 2.48
TSEN54-201ENST00000333213 PHLPP1O60346 1717 aa30.55■■■□□ 2.48
TSEN54-201ENST00000333213 ERBB3P21860 1342 aa30.54■■■□□ 2.48
TSEN54-201ENST00000333213 NFE2L2Q16236 605 aa30.54■■■□□ 2.48
TSEN54-201ENST00000333213 NEFMP07197 916 aa30.53■■■□□ 2.48
TSEN54-201ENST00000333213 SLFN5Q08AF3 891 aa30.53■■■□□ 2.48
TSEN54-201ENST00000333213 DUSP27Q5VZP5 1158 aa30.52■■■□□ 2.48
TSEN54-201ENST00000333213 TRMT2AQ8IZ69 625 aaKnown RBP30.52■■■□□ 2.48
TSEN54-201ENST00000333213 ABCC6O95255 1503 aa30.51■■■□□ 2.47
TSEN54-201ENST00000333213 COL22A1Q8NFW1 1626 aaPredicted RBP30.5■■■□□ 2.47
TSEN54-201ENST00000333213 HAP1P54257 671 aaPredicted RBP30.49■■■□□ 2.47
TSEN54-201ENST00000333213 NCAPD2Q15021 1401 aa30.49■■■□□ 2.47
TSEN54-201ENST00000333213 WDR63Q8IWG1 891 aa30.49■■■□□ 2.47
TSEN54-201ENST00000333213 PRDM11Q9NQV5 511 aa30.49■■■□□ 2.47
TSEN54-201ENST00000333213 DLG5Q8TDM6 1919 aa30.48■■■□□ 2.47
TSEN54-201ENST00000333213 LMO7Q8WWI1 1683 aa30.47■■■□□ 2.47
TSEN54-201ENST00000333213 CAMTA1Q9Y6Y1 1673 aa30.47■■■□□ 2.47
TSEN54-201ENST00000333213 E9PSI1 815 aa30.45■■■□□ 2.47
TSEN54-201ENST00000333213 MTHFSDQ2M296 383 aaKnown RBP30.45■■■□□ 2.47
TSEN54-201ENST00000333213 FAM83GA6ND36 823 aa30.43■■■□□ 2.46
TSEN54-201ENST00000333213 THUMPD2Q9BTF0 503 aaKnown RBP30.41■■■□□ 2.46
TSEN54-201ENST00000333213 COL5A2P05997 1499 aaPredicted RBP30.38■■■□□ 2.45
TSEN54-201ENST00000333213 DCTN1Q14203 1278 aa30.38■■■□□ 2.45
TSEN54-201ENST00000333213 FAM208AQ9UK61 1670 aaKnown RBP30.38■■■□□ 2.45
TSEN54-201ENST00000333213 NLRP2Q9NX02 1062 aa30.37■■■□□ 2.45
TSEN54-201ENST00000333213 CSB-PGBD3P0DP91 1061 aa30.36■■■□□ 2.45
TSEN54-201ENST00000333213 GAS2L2Q8NHY3 880 aa30.35■■■□□ 2.45
TSEN54-201ENST00000333213 IL16Q14005 1332 aa30.34■■■□□ 2.45
TSEN54-201ENST00000333213 WDR17Q8IZU2 1322 aa30.34■■■□□ 2.45
TSEN54-201ENST00000333213 LMOD3Q0VAK6 560 aa30.34■■■□□ 2.45
TSEN54-201ENST00000333213 RCAN3Q9UKA8 241 aa30.33■■■□□ 2.45
TSEN54-201ENST00000333213 MCM10Q7L590 875 aa30.32■■■□□ 2.44
TSEN54-201ENST00000333213 TSR2Q969E8 191 aaKnown RBP30.32■■■□□ 2.44
TSEN54-201ENST00000333213 FANCIQ9NVI1 1328 aa30.3■■■□□ 2.44
TSEN54-201ENST00000333213 BTG4Q9NY30 223 aa30.3■■■□□ 2.44
TSEN54-201ENST00000333213 MYH16Q9H6N6 1097 aa30.29■■■□□ 2.44
TSEN54-201ENST00000333213 COL14A1Q05707 1796 aaKnown RBP30.29■■■□□ 2.44
TSEN54-201ENST00000333213 RNF123Q5XPI4 1314 aa30.29■■■□□ 2.44
TSEN54-201ENST00000333213 LARP1Q6PKG0 1096 aaKnown RBP30.28■■■□□ 2.44
TSEN54-201ENST00000333213 STRN4Q9NRL3 753 aa30.28■■■□□ 2.44
TSEN54-201ENST00000333213 MEGF6O75095 1541 aa30.28■■■□□ 2.44
TSEN54-201ENST00000333213 ADAMTS2O95450 1211 aa30.27■■■□□ 2.44
TSEN54-201ENST00000333213 ZNF853P0CG23 659 aa30.27■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms