RNA–Protein interactions for RNA: ENST00000333130.3

MRPL40-201, Transcript of mitochondrial ribosomal protein L40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL40, Length 1,387 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-201ENST00000333130 VPS72Q15906 364 aa28.04■■■□□ 2.08
MRPL40-201ENST00000333130 CAMTA1Q9Y6Y1 1673 aa28.04■■■□□ 2.08
MRPL40-201ENST00000333130 STRN4Q9NRL3 753 aa28.02■■■□□ 2.08
MRPL40-201ENST00000333130 COL5A2P05997 1499 aaPredicted RBP28.01■■■□□ 2.07
MRPL40-201ENST00000333130 AMER1Q5JTC6 1135 aaPredicted RBP28■■■□□ 2.07
MRPL40-201ENST00000333130 GJD4Q96KN9 370 aaPredicted RBP28■■■□□ 2.07
MRPL40-201ENST00000333130 CDK12Q9NYV4 1490 aaPredicted RBP28■■■□□ 2.07
MRPL40-201ENST00000333130 NPC1L1Q9UHC9 1359 aa28■■■□□ 2.07
MRPL40-201ENST00000333130 MAP2P11137 1827 aaKnown RBP27.99■■■□□ 2.07
MRPL40-201ENST00000333130 RTL1A6NKG5 1358 aa27.98■■■□□ 2.07
MRPL40-201ENST00000333130 BLMP54132 1417 aaPredicted RBP27.98■■■□□ 2.07
MRPL40-201ENST00000333130 AMPHP49418 695 aa27.98■■■□□ 2.07
MRPL40-201ENST00000333130 DDX10Q13206 875 aaKnown RBP27.98■■■□□ 2.07
MRPL40-201ENST00000333130 MAP3K19Q56UN5 1328 aa27.96■■■□□ 2.07
MRPL40-201ENST00000333130 MORC1Q86VD1 984 aa27.96■■■□□ 2.07
MRPL40-201ENST00000333130 GLI3P10071 1580 aa27.95■■■□□ 2.07
MRPL40-201ENST00000333130 CSB-PGBD3P0DP91 1061 aa27.95■■■□□ 2.06
MRPL40-201ENST00000333130 KIF24Q5T7B8 1368 aa27.94■■■□□ 2.06
MRPL40-201ENST00000333130 FAM208AQ9UK61 1670 aaKnown RBP27.94■■■□□ 2.06
MRPL40-201ENST00000333130 SPATA31A5Q5VU36 1347 aa27.94■■■□□ 2.06
MRPL40-201ENST00000333130 SPATA31A7Q8IWB4 1347 aa27.94■■■□□ 2.06
MRPL40-201ENST00000333130 RRS1Q15050 365 aaKnown RBP27.93■■■□□ 2.06
MRPL40-201ENST00000333130 IP6K1Q92551 441 aa27.93■■■□□ 2.06
MRPL40-201ENST00000333130 CRB1P82279 1406 aa27.93■■■□□ 2.06
MRPL40-201ENST00000333130 AXIN2Q9Y2T1 843 aa27.92■■■□□ 2.06
MRPL40-201ENST00000333130 WDR17Q8IZU2 1322 aa27.92■■■□□ 2.06
MRPL40-201ENST00000333130 TNNT2P45379 298 aaPredicted RBP27.91■■■□□ 2.06
MRPL40-201ENST00000333130 LARP1Q6PKG0 1096 aaKnown RBP27.91■■■□□ 2.06
MRPL40-201ENST00000333130 TOM1L2Q6ZVM7 507 aa27.91■■■□□ 2.06
MRPL40-201ENST00000333130 FLT4P35916 1363 aa27.91■■■□□ 2.06
MRPL40-201ENST00000333130 SPATA31A1Q5TZJ5 1347 aa27.9■■■□□ 2.06
MRPL40-201ENST00000333130 ILDR2Q71H61 639 aa27.9■■■□□ 2.06
MRPL40-201ENST00000333130 SMG6Q86US8 1419 aaKnown RBP27.9■■■□□ 2.06
MRPL40-201ENST00000333130 FBLN1P23142 703 aa27.89■■■□□ 2.06
MRPL40-201ENST00000333130 HOXC9P31274 260 aa27.89■■■□□ 2.06
MRPL40-201ENST00000333130 RGS12O14924 1447 aa27.89■■■□□ 2.05
MRPL40-201ENST00000333130 ERBB3P21860 1342 aa27.88■■■□□ 2.05
MRPL40-201ENST00000333130 A0A0G2JS52 829 aa27.88■■■□□ 2.05
MRPL40-201ENST00000333130 MYT1Q01538 1121 aa27.88■■■□□ 2.05
MRPL40-201ENST00000333130 CC2D1BQ5T0F9 858 aaKnown RBP27.88■■■□□ 2.05
MRPL40-201ENST00000333130 ANKRD24Q8TF21 1146 aa27.87■■■□□ 2.05
MRPL40-201ENST00000333130 USP35Q9P2H5 1018 aa27.87■■■□□ 2.05
MRPL40-201ENST00000333130 THRAP3Q9Y2W1 955 aaKnown RBP27.87■■■□□ 2.05
MRPL40-201ENST00000333130 PEAK1Q9H792 1746 aa27.87■■■□□ 2.05
MRPL40-201ENST00000333130 PPM1GO15355 546 aaPredicted RBP27.86■■■□□ 2.05
MRPL40-201ENST00000333130 TCP11L2Q8N4U5 519 aa27.86■■■□□ 2.05
MRPL40-201ENST00000333130 FAM98CQ17RN3 349 aaKnown RBP27.85■■■□□ 2.05
MRPL40-201ENST00000333130 EMILIN1Q9Y6C2 1016 aa27.85■■■□□ 2.05
MRPL40-201ENST00000333130 INSRP06213 1382 aa27.84■■■□□ 2.05
MRPL40-201ENST00000333130 WNK3Q9BYP7 1800 aa27.84■■■□□ 2.05
MRPL40-201ENST00000333130 LTV1Q96GA3 475 aaPredicted RBP27.83■■■□□ 2.05
MRPL40-201ENST00000333130 CARD10Q9BWT7 1032 aa27.83■■■□□ 2.05
MRPL40-201ENST00000333130 CNGB1Q14028 1251 aaPredicted RBP27.82■■■□□ 2.04
MRPL40-201ENST00000333130 NLRP2Q9NX02 1062 aa27.82■■■□□ 2.04
MRPL40-201ENST00000333130 POLKQ9UBT6 870 aa27.82■■■□□ 2.04
MRPL40-201ENST00000333130 THSD7AQ9UPZ6 1657 aa27.81■■■□□ 2.04
MRPL40-201ENST00000333130 BARGINQ6ZT62 677 aa27.81■■■□□ 2.04
MRPL40-201ENST00000333130 BRWD3Q6RI45 1802 aa27.8■■■□□ 2.04
MRPL40-201ENST00000333130 ONECUT3O60422 494 aaPredicted RBP27.79■■■□□ 2.04
MRPL40-201ENST00000333130 SEPT12Q8IYM1 358 aa27.79■■■□□ 2.04
MRPL40-201ENST00000333130 PARD3Q8TEW0 1356 aa27.79■■■□□ 2.04
MRPL40-201ENST00000333130 HSP90AB2PQ58FF8 381 aa27.78■■■□□ 2.04
MRPL40-201ENST00000333130 CDCA7Q9BWT1 371 aaPredicted RBP27.77■■■□□ 2.04
MRPL40-201ENST00000333130 PARP4Q9UKK3 1724 aaKnown RBP27.77■■■□□ 2.04
MRPL40-201ENST00000333130 RGPD2P0DJD1 1756 aa27.77■■■□□ 2.04
MRPL40-201ENST00000333130 LRRC37A3O60309 1634 aa27.7■■■□□ 2.02
MRPL40-201ENST00000333130 KRT27Q7Z3Y8 459 aa27.7■■■□□ 2.02
MRPL40-201ENST00000333130 MTHFSP49914 203 aa27.69■■■□□ 2.02
MRPL40-201ENST00000333130 IL2RBP14784 551 aa27.68■■■□□ 2.02
MRPL40-201ENST00000333130 PDE3BQ13370 1112 aa27.68■■■□□ 2.02
MRPL40-201ENST00000333130 RALBP1Q15311 655 aa27.67■■■□□ 2.02
MRPL40-201ENST00000333130 DDB1Q16531 1140 aa27.67■■■□□ 2.02
MRPL40-201ENST00000333130 DISP2A7MBM2 1401 aa27.67■■■□□ 2.02
MRPL40-201ENST00000333130 EIF4A2Q14240 407 aaKnown RBP27.65■■■□□ 2.02
MRPL40-201ENST00000333130 NBPF6Q5VWK0 638 aa27.64■■■□□ 2.02
MRPL40-201ENST00000333130 NBPF4Q96M43 638 aa27.64■■■□□ 2.02
MRPL40-201ENST00000333130 CFAP53Q96M91 514 aa27.64■■■□□ 2.02
MRPL40-201ENST00000333130 PRKRIP1Q9H875 184 aaPredicted RBP27.64■■■□□ 2.02
MRPL40-201ENST00000333130 SOCS7O14512 581 aa27.63■■■□□ 2.01
MRPL40-201ENST00000333130 PPP2R1AP30153 589 aa27.63■■■□□ 2.01
MRPL40-201ENST00000333130 RAPGEF4Q8WZA2 1011 aa27.63■■■□□ 2.01
MRPL40-201ENST00000333130 TNS2Q63HR2 1409 aa27.63■■■□□ 2.01
MRPL40-201ENST00000333130 EXOC5O00471 708 aa27.62■■■□□ 2.01
MRPL40-201ENST00000333130 COL3A1P02461 1466 aaPredicted RBP27.61■■■□□ 2.01
MRPL40-201ENST00000333130 USHBP1Q8N6Y0 703 aa27.6■■■□□ 2.01
MRPL40-201ENST00000333130 RGPD1P0DJD0 1748 aa27.59■■■□□ 2.01
MRPL40-201ENST00000333130 TATP17735 454 aaPredicted RBP27.59■■■□□ 2.01
MRPL40-201ENST00000333130 NCAPD2Q15021 1401 aa27.59■■■□□ 2.01
MRPL40-201ENST00000333130 EYA1Q99502 592 aa27.59■■■□□ 2.01
MRPL40-201ENST00000333130 MYBBP1AQ9BQG0 1328 aaKnown RBP27.58■■■□□ 2.01
MRPL40-201ENST00000333130 EP400Q96L91 3159 aa27.58■■■□□ 2.01
MRPL40-201ENST00000333130 DIAPH1O60610 1272 aaKnown RBP27.58■■■□□ 2.01
MRPL40-201ENST00000333130 IGSF1Q8N6C5 1336 aa27.56■■■□□ 2
MRPL40-201ENST00000333130 OVOS2A0A0G2JMS6 1433 aa27.56■■■□□ 2
MRPL40-201ENST00000333130 MEGF6O75095 1541 aa27.56■■■□□ 2
MRPL40-201ENST00000333130 FAM196AQ6ZSG2 479 aa27.55■■■□□ 2
MRPL40-201ENST00000333130 IL13P35225 146 aa27.54■■■□□ 2
MRPL40-201ENST00000333130 PLEKHG2Q9H7P9 1386 aa27.53■■■□□ 2
MRPL40-201ENST00000333130 ANP32CO43423 234 aa27.52■■■□□ 2
MRPL40-201ENST00000333130 PKD1L3Q7Z443 1732 aa27.52■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms