RNA–Protein interactions for RNA: ENST00000329563.8

TSPO-201, Transcript of translocator protein, humanhuman

APPRIS P1 TSL 3 BASIC

Gene TSPO, Length 955 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-201ENST00000329563 PARP4Q9UKK3 1724 aaKnown RBP20.76■□□□□ 0.91
TSPO-201ENST00000329563 PARD3Q8TEW0 1356 aa20.76■□□□□ 0.91
TSPO-201ENST00000329563 C11orf95C9JLR9 678 aaPredicted RBP20.76■□□□□ 0.91
TSPO-201ENST00000329563 CRB1P82279 1406 aa20.76■□□□□ 0.91
TSPO-201ENST00000329563 SOX12O15370 315 aa20.75■□□□□ 0.91
TSPO-201ENST00000329563 ARHGEF25Q86VW2 580 aa20.75■□□□□ 0.91
TSPO-201ENST00000329563 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.75■□□□□ 0.91
TSPO-201ENST00000329563 A0A1W2PP64 1363 aa20.74■□□□□ 0.91
TSPO-201ENST00000329563 WNK3Q9BYP7 1800 aa20.74■□□□□ 0.91
TSPO-201ENST00000329563 NME9Q86XW9 330 aa20.74■□□□□ 0.91
TSPO-201ENST00000329563 TMC1Q8TDI8 760 aa20.74■□□□□ 0.91
TSPO-201ENST00000329563 USP31Q70CQ4 1352 aa20.73■□□□□ 0.91
TSPO-201ENST00000329563 TRIM37O94972 964 aa20.73■□□□□ 0.91
TSPO-201ENST00000329563 LRRC37A3O60309 1634 aa20.73■□□□□ 0.91
TSPO-201ENST00000329563 PSDA5PKW4 1024 aaPredicted RBP20.72■□□□□ 0.91
TSPO-201ENST00000329563 KCNH5Q8NCM2 988 aa20.71■□□□□ 0.91
TSPO-201ENST00000329563 PUS7Q96PZ0 661 aaKnown RBP20.71■□□□□ 0.91
TSPO-201ENST00000329563 EDC4Q6P2E9 1401 aaKnown RBP20.7■□□□□ 0.9
TSPO-201ENST00000329563 APBA3O96018 575 aa20.7■□□□□ 0.9
TSPO-201ENST00000329563 USP47Q96K76 1375 aa20.7■□□□□ 0.9
TSPO-201ENST00000329563 PEAK1Q9H792 1746 aa20.7■□□□□ 0.9
TSPO-201ENST00000329563 LTN1O94822 1766 aa20.69■□□□□ 0.9
TSPO-201ENST00000329563 WDR17Q8IZU2 1322 aa20.69■□□□□ 0.9
TSPO-201ENST00000329563 EZH2Q15910 746 aaKnown RBP20.68■□□□□ 0.9
TSPO-201ENST00000329563 HDGFL2Q7Z4V5 671 aaPredicted RBP20.68■□□□□ 0.9
TSPO-201ENST00000329563 OVOS2A0A0J9YW53 1432 aa20.68■□□□□ 0.9
TSPO-201ENST00000329563 OVOS2Q6IE36 1432 aa20.68■□□□□ 0.9
TSPO-201ENST00000329563 ABCC6O95255 1503 aa20.68■□□□□ 0.9
TSPO-201ENST00000329563 TOM1L2Q6ZVM7 507 aa20.67■□□□□ 0.9
TSPO-201ENST00000329563 CAMKK2Q96RR4 588 aa20.67■□□□□ 0.9
TSPO-201ENST00000329563 RREB1Q92766 1687 aa20.67■□□□□ 0.9
TSPO-201ENST00000329563 R3HDM1Q15032 1099 aaKnown RBP20.66■□□□□ 0.9
TSPO-201ENST00000329563 OVOS2A0A0G2JMS6 1433 aa20.66■□□□□ 0.9
TSPO-201ENST00000329563 CDCA7Q9BWT1 371 aaPredicted RBP20.65■□□□□ 0.9
TSPO-201ENST00000329563 TERF2IPQ9NYB0 399 aa20.65■□□□□ 0.9
TSPO-201ENST00000329563 NBPF14Q5TI25 921 aa20.64■□□□□ 0.89
TSPO-201ENST00000329563 NINLQ9Y2I6 1382 aa20.63■□□□□ 0.89
TSPO-201ENST00000329563 NUP188Q5SRE5 1749 aa20.63■□□□□ 0.89
TSPO-201ENST00000329563 RGPD3A6NKT7 1758 aaPredicted RBP20.62■□□□□ 0.89
TSPO-201ENST00000329563 RGPD4Q7Z3J3 1758 aa20.62■□□□□ 0.89
TSPO-201ENST00000329563 DDB1Q16531 1140 aa20.62■□□□□ 0.89
TSPO-201ENST00000329563 SBF2Q86WG5 1849 aa20.62■□□□□ 0.89
TSPO-201ENST00000329563 MYOM1P52179 1685 aa20.61■□□□□ 0.89
TSPO-201ENST00000329563 CSB-PGBD3P0DP91 1061 aa20.6■□□□□ 0.89
TSPO-201ENST00000329563 CARD10Q9BWT7 1032 aa20.6■□□□□ 0.89
TSPO-201ENST00000329563 ANKRD36BQ8N2N9 1353 aa20.59■□□□□ 0.89
TSPO-201ENST00000329563 ERBB3P21860 1342 aa20.59■□□□□ 0.89
TSPO-201ENST00000329563 TMF1P82094 1093 aa20.58■□□□□ 0.89
TSPO-201ENST00000329563 PTF1AQ7RTS3 328 aa20.58■□□□□ 0.89
TSPO-201ENST00000329563 MARCH10Q8NA82 808 aaPredicted RBP20.58■□□□□ 0.89
TSPO-201ENST00000329563 FBLN1P23142 703 aa20.57■□□□□ 0.88
TSPO-201ENST00000329563 SLC24A1O60721 1099 aa20.56■□□□□ 0.88
TSPO-201ENST00000329563 CCDC7Q96M83 1385 aa20.56■□□□□ 0.88
TSPO-201ENST00000329563 BCL9O00512 1426 aa20.54■□□□□ 0.88
TSPO-201ENST00000329563 PLSCR1O15162 318 aa20.53■□□□□ 0.88
TSPO-201ENST00000329563 ANKRD24Q8TF21 1146 aa20.53■□□□□ 0.88
TSPO-201ENST00000329563 BCL11BQ9C0K0 894 aaPredicted RBP20.53■□□□□ 0.88
TSPO-201ENST00000329563 TNS2Q63HR2 1409 aa20.53■□□□□ 0.88
TSPO-201ENST00000329563 FYB1O15117 783 aa20.52■□□□□ 0.88
TSPO-201ENST00000329563 NLRP2Q9NX02 1062 aa20.52■□□□□ 0.88
TSPO-201ENST00000329563 KIF20BQ96Q89 1820 aa20.52■□□□□ 0.88
TSPO-201ENST00000329563 MAP3K19Q56UN5 1328 aa20.52■□□□□ 0.87
TSPO-201ENST00000329563 EXOC5O00471 708 aa20.51■□□□□ 0.87
TSPO-201ENST00000329563 IP6K1Q92551 441 aa20.51■□□□□ 0.87
TSPO-201ENST00000329563 COG3Q96JB2 828 aa20.51■□□□□ 0.87
TSPO-201ENST00000329563 RGPD2P0DJD1 1756 aa20.51■□□□□ 0.87
TSPO-201ENST00000329563 CARD14Q9BXL6 1004 aa20.5■□□□□ 0.87
TSPO-201ENST00000329563 GGNBP2Q9H3C7 697 aa20.5■□□□□ 0.87
TSPO-201ENST00000329563 FAM208AQ9UK61 1670 aaKnown RBP20.5■□□□□ 0.87
TSPO-201ENST00000329563 KAT6BQ8WYB5 2073 aa20.49■□□□□ 0.87
TSPO-201ENST00000329563 HOXC9P31274 260 aa20.47■□□□□ 0.87
TSPO-201ENST00000329563 LTV1Q96GA3 475 aaPredicted RBP20.47■□□□□ 0.87
TSPO-201ENST00000329563 SPON1Q9HCB6 807 aa20.47■□□□□ 0.87
TSPO-201ENST00000329563 PPP1R1BQ9UD71 204 aaPredicted RBP20.47■□□□□ 0.87
TSPO-201ENST00000329563 NHSQ6T4R5 1651 aa20.46■□□□□ 0.87
TSPO-201ENST00000329563 IL2RBP14784 551 aa20.46■□□□□ 0.87
TSPO-201ENST00000329563 RRS1Q15050 365 aaKnown RBP20.46■□□□□ 0.87
TSPO-201ENST00000329563 CDCA8Q53HL2 280 aa20.45■□□□□ 0.86
TSPO-201ENST00000329563 NSD3Q9BZ95 1437 aa20.44■□□□□ 0.86
TSPO-201ENST00000329563 KCNQ2O43526 872 aa20.44■□□□□ 0.86
TSPO-201ENST00000329563 PROM2Q8N271 834 aa20.44■□□□□ 0.86
TSPO-201ENST00000329563 SHANK3Q9BYB0 1731 aa20.44■□□□□ 0.86
TSPO-201ENST00000329563 DCAF8L1A6NGE4 600 aa20.42■□□□□ 0.86
TSPO-201ENST00000329563 AMPHP49418 695 aa20.42■□□□□ 0.86
TSPO-201ENST00000329563 RTL1A6NKG5 1358 aa20.42■□□□□ 0.86
TSPO-201ENST00000329563 MEGF6O75095 1541 aa20.4■□□□□ 0.86
TSPO-201ENST00000329563 HSPA5P11021 654 aaKnown RBP20.4■□□□□ 0.86
TSPO-201ENST00000329563 ANO8Q9HCE9 1232 aaPredicted RBP20.4■□□□□ 0.86
TSPO-201ENST00000329563 CASZ1Q86V15 1759 aa20.39■□□□□ 0.86
TSPO-201ENST00000329563 ACSBG1Q96GR2 724 aa20.39■□□□□ 0.85
TSPO-201ENST00000329563 STK32BQ9NY57 414 aa20.39■□□□□ 0.85
TSPO-201ENST00000329563 ANKRD26Q9UPS8 1709 aa20.39■□□□□ 0.85
TSPO-201ENST00000329563 NBPF6Q5VWK0 638 aa20.38■□□□□ 0.85
TSPO-201ENST00000329563 NBPF4Q96M43 638 aa20.38■□□□□ 0.85
TSPO-201ENST00000329563 BTAF1O14981 1849 aa20.38■□□□□ 0.85
TSPO-201ENST00000329563 TXNRD1Q16881 649 aa20.37■□□□□ 0.85
TSPO-201ENST00000329563 HSP90AB2PQ58FF8 381 aa20.37■□□□□ 0.85
TSPO-201ENST00000329563 EIF4G2P78344 907 aaKnown RBP eCLIP20.36■□□□□ 0.858e-7■■■■■ 28.7
TSPO-201ENST00000329563 USHBP1Q8N6Y0 703 aa20.36■□□□□ 0.85
TSPO-201ENST00000329563 EMILIN1Q9Y6C2 1016 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms