RNA–Protein interactions for RNA: ENST00000328392.10

SKP1-201, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-201ENST00000328392 SLC10A4Q96EP9 437 aa7.99□□□□□ -1.13
SKP1-201ENST00000328392 C11orf95C9JLR9 678 aaPredicted RBP7.98□□□□□ -1.13
SKP1-201ENST00000328392 FBXO45P0C2W1 286 aa7.98□□□□□ -1.13
SKP1-201ENST00000328392 SNRPBP14678 240 aaKnown RBP7.98□□□□□ -1.13
SKP1-201ENST00000328392 KCTD15Q96SI1 283 aaPredicted RBP7.98□□□□□ -1.13
SKP1-201ENST00000328392 ZBBXA8MT70 800 aa7.97□□□□□ -1.13
SKP1-201ENST00000328392 TBC1D2BQ9UPU7 963 aa7.97□□□□□ -1.13
SKP1-201ENST00000328392 NDUFB9Q9Y6M9 179 aa7.97□□□□□ -1.13
SKP1-201ENST00000328392 SOCS7O14512 581 aa7.96□□□□□ -1.14
SKP1-201ENST00000328392 INTS6LQ5JSJ4 861 aaKnown RBP7.96□□□□□ -1.14
SKP1-201ENST00000328392 DZIP3Q86Y13 1208 aaKnown RBP7.96□□□□□ -1.14
SKP1-201ENST00000328392 CCDC116Q8IYX3 515 aa7.96□□□□□ -1.14
SKP1-201ENST00000328392 RAB15P59190 212 aa7.95□□□□□ -1.14
SKP1-201ENST00000328392 PPP1R26Q5T8A7 1209 aaPredicted RBP7.95□□□□□ -1.14
SKP1-201ENST00000328392 ZNF775Q96BV0 537 aaPredicted RBP7.95□□□□□ -1.14
SKP1-201ENST00000328392 TRIM47Q96LD4 638 aa7.95□□□□□ -1.14
SKP1-201ENST00000328392 MRPL14Q6P1L8 145 aaKnown RBP7.94□□□□□ -1.14
SKP1-201ENST00000328392 ZFP42Q96MM3 310 aa7.94□□□□□ -1.14
SKP1-201ENST00000328392 PCDHB9Q9Y5E1 797 aa7.94□□□□□ -1.14
SKP1-201ENST00000328392 NR1H3Q13133 447 aa7.93□□□□□ -1.14
SKP1-201ENST00000328392 CBLBQ13191 982 aa7.93□□□□□ -1.14
SKP1-201ENST00000328392 PURBQ96QR8 312 aaKnown RBP7.93□□□□□ -1.14
SKP1-201ENST00000328392 TMPRSS4Q9NRS4 437 aa7.93□□□□□ -1.14
SKP1-201ENST00000328392 CDV3Q9UKY7 258 aaKnown RBP7.93□□□□□ -1.14
SKP1-201ENST00000328392 EMILIN1Q9Y6C2 1016 aa7.93□□□□□ -1.14
SKP1-201ENST00000328392 GIGYF1O75420 1035 aaPredicted RBP7.92□□□□□ -1.14
SKP1-201ENST00000328392 IRF5Q13568 498 aa7.92□□□□□ -1.14
SKP1-201ENST00000328392 MCM6Q14566 821 aa7.92□□□□□ -1.14
SKP1-201ENST00000328392 SENP2Q9HC62 589 aa7.92□□□□□ -1.14
SKP1-201ENST00000328392 GDPD2Q9HCC8 539 aa7.92□□□□□ -1.14
SKP1-201ENST00000328392 ESPNB1AK53 854 aa7.91□□□□□ -1.14
SKP1-201ENST00000328392 NBPF20Q3BBV1 942 aa7.91□□□□□ -1.14
SKP1-201ENST00000328392 C6orf118Q5T5N4 469 aa7.91□□□□□ -1.14
SKP1-201ENST00000328392 MEIOBQ8N635 442 aa7.91□□□□□ -1.14
SKP1-201ENST00000328392 ERVH48-1M5A8F1 160 aa7.9□□□□□ -1.14
SKP1-201ENST00000328392 APBB1O00213 710 aa7.9□□□□□ -1.14
SKP1-201ENST00000328392 SOBPA7XYQ1 873 aa7.89□□□□□ -1.15
SKP1-201ENST00000328392 ZNF784Q8NCA9 323 aaPredicted RBP7.89□□□□□ -1.15
SKP1-201ENST00000328392 KIFC2Q96AC6 838 aa7.89□□□□□ -1.15
SKP1-201ENST00000328392 PGPEP1Q9NXJ5 209 aa7.89□□□□□ -1.15
SKP1-201ENST00000328392 ABL2P42684 1182 aa7.88□□□□□ -1.15
SKP1-201ENST00000328392 DHX9Q08211 1270 aaKnown RBP7.88□□□□□ -1.15
SKP1-201ENST00000328392 SCARF1Q14162 830 aa7.88□□□□□ -1.15
SKP1-201ENST00000328392 LINC00528Q8N1L1 170 aa7.88□□□□□ -1.15
SKP1-201ENST00000328392 AGBL1Q96MI9 1066 aa7.88□□□□□ -1.15
SKP1-201ENST00000328392 SUPT5HO00267 1087 aaKnown RBP7.87□□□□□ -1.15
SKP1-201ENST00000328392 LILRA1O75019 489 aa7.87□□□□□ -1.15
SKP1-201ENST00000328392 BMP2P12643 396 aa7.87□□□□□ -1.15
SKP1-201ENST00000328392 ADD1P35611 737 aaKnown RBP7.87□□□□□ -1.15
SKP1-201ENST00000328392 Q6ZVU0 165 aa7.87□□□□□ -1.15
SKP1-201ENST00000328392 VAC14Q08AM6 782 aa7.86□□□□□ -1.15
SKP1-201ENST00000328392 ERICH6Q7L0X2 663 aa7.86□□□□□ -1.15
SKP1-201ENST00000328392 POM121Q96HA1 1249 aa7.86□□□□□ -1.15
SKP1-201ENST00000328392 PRM3Q9NNZ6 103 aa7.86□□□□□ -1.15
SKP1-201ENST00000328392 COG6Q9Y2V7 657 aa7.86□□□□□ -1.15
SKP1-201ENST00000328392 TSEN34Q9BSV6 310 aaKnown RBP7.85□□□□□ -1.15
SKP1-201ENST00000328392 CYLDQ9NQC7 956 aa7.85□□□□□ -1.15
SKP1-201ENST00000328392 UPP2O95045 317 aa7.84□□□□□ -1.15
SKP1-201ENST00000328392 RELBQ01201 579 aa7.84□□□□□ -1.15
SKP1-201ENST00000328392 SEPT12Q8IYM1 358 aa7.84□□□□□ -1.15
SKP1-201ENST00000328392 KDF1Q8NAX2 398 aaPredicted RBP7.84□□□□□ -1.15
SKP1-201ENST00000328392 ZNF395Q9H8N7 513 aaPredicted RBP7.83□□□□□ -1.16
SKP1-201ENST00000328392 CEP126Q9P2H0 1117 aa7.83□□□□□ -1.16
SKP1-201ENST00000328392 ZNF330Q9Y3S2 320 aaPredicted RBP7.83□□□□□ -1.16
SKP1-201ENST00000328392 TSGA10IPQ3SY00 556 aa7.82□□□□□ -1.16
SKP1-201ENST00000328392 DNMT3LQ9UJW3 386 aa7.82□□□□□ -1.16
SKP1-201ENST00000328392 SOS2Q07890 1332 aaPredicted RBP7.81□□□□□ -1.16
SKP1-201ENST00000328392 FIGNL2A6NMB9 653 aa7.81□□□□□ -1.16
SKP1-201ENST00000328392 SPINT1O43278 529 aa7.81□□□□□ -1.16
SKP1-201ENST00000328392 SCTRP47872 440 aa7.81□□□□□ -1.16
SKP1-201ENST00000328392 VEGFBP49765 207 aa7.81□□□□□ -1.16
SKP1-201ENST00000328392 MCCD1P59942 119 aaPredicted RBP7.81□□□□□ -1.16
SKP1-201ENST00000328392 NFX1Q12986 1120 aaKnown RBP7.81□□□□□ -1.16
SKP1-201ENST00000328392 LCE2AQ5TA79 106 aaPredicted RBP7.81□□□□□ -1.16
SKP1-201ENST00000328392 LCE2CQ5TA81 110 aa7.81□□□□□ -1.16
SKP1-201ENST00000328392 TREML4Q6UXN2 200 aa7.81□□□□□ -1.16
SKP1-201ENST00000328392 CCDC85AQ96PX6 553 aaPredicted RBP7.81□□□□□ -1.16
SKP1-201ENST00000328392 PCDHB11Q9Y5F2 797 aa7.81□□□□□ -1.16
SKP1-201ENST00000328392 TERTO14746 1132 aaKnown RBP7.8□□□□□ -1.16
SKP1-201ENST00000328392 MAN1A2O60476 641 aa7.8□□□□□ -1.16
SKP1-201ENST00000328392 ADH1AP07327 375 aa7.8□□□□□ -1.16
SKP1-201ENST00000328392 CTSOP43234 321 aaPredicted RBP7.8□□□□□ -1.16
SKP1-201ENST00000328392 EIF4G2P78344 907 aaKnown RBP eCLIP7.8□□□□□ -1.16
SKP1-201ENST00000328392 RNF20Q5VTR2 975 aa7.8□□□□□ -1.16
SKP1-201ENST00000328392 INSM2Q96T92 566 aaPredicted RBP7.8□□□□□ -1.16
SKP1-201ENST00000328392 CDCA7Q9BWT1 371 aaPredicted RBP7.8□□□□□ -1.16
SKP1-201ENST00000328392 FLIIQ13045 1269 aa7.79□□□□□ -1.16
SKP1-201ENST00000328392 PHTF2Q8N3S3 785 aa7.79□□□□□ -1.16
SKP1-201ENST00000328392 TTLL8A6PVC2 850 aa7.78□□□□□ -1.16
SKP1-201ENST00000328392 WFS1O76024 890 aa7.78□□□□□ -1.16
SKP1-201ENST00000328392 UBTFP17480 764 aaKnown RBP7.78□□□□□ -1.16
SKP1-201ENST00000328392 PTGIRP43119 386 aa7.78□□□□□ -1.16
SKP1-201ENST00000328392 ERVK-9P63128 1117 aa7.78□□□□□ -1.16
SKP1-201ENST00000328392 CLUAP1Q96AJ1 413 aa7.78□□□□□ -1.16
SKP1-201ENST00000328392 ZMYND15Q9H091 742 aa7.78□□□□□ -1.16
SKP1-201ENST00000328392 NXF1Q9UBU9 619 aaKnown RBP7.78□□□□□ -1.16
SKP1-201ENST00000328392 WASHC4Q2M389 1173 aa7.77□□□□□ -1.17
SKP1-201ENST00000328392 CC2D2BQ6DHV5 1058 aa7.77□□□□□ -1.17
SKP1-201ENST00000328392 ZNF592Q92610 1267 aa7.77□□□□□ -1.17
SKP1-201ENST00000328392 OSBPL3Q9H4L5 887 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms