RNA–Protein interactions for RNA: ENST00000328270.3

TNRC18-201, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 5

Gene TNRC18, Length 1,220 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-201ENST00000328270 THSD7AQ9UPZ6 1657 aa30.09■■■□□ 2.41
TNRC18-201ENST00000328270 LARP1Q6PKG0 1096 aaKnown RBP30.08■■■□□ 2.41
TNRC18-201ENST00000328270 ABCC6O95255 1503 aa30.07■■■□□ 2.4
TNRC18-201ENST00000328270 A0A0G2JS52 829 aa30.07■■■□□ 2.4
TNRC18-201ENST00000328270 MYT1Q01538 1121 aa30.07■■■□□ 2.4
TNRC18-201ENST00000328270 POLR3GLQ9BT43 218 aa30.07■■■□□ 2.4
TNRC18-201ENST00000328270 USP35Q9P2H5 1018 aa30.04■■■□□ 2.4
TNRC18-201ENST00000328270 AXIN2Q9Y2T1 843 aa30.04■■■□□ 2.4
TNRC18-201ENST00000328270 COG3Q96JB2 828 aa30.03■■■□□ 2.4
TNRC18-201ENST00000328270 CRB1P82279 1406 aa30.02■■■□□ 2.4
TNRC18-201ENST00000328270 CARD14Q9BXL6 1004 aa30.01■■■□□ 2.39
TNRC18-201ENST00000328270 NSD3Q9BZ95 1437 aa30.01■■■□□ 2.39
TNRC18-201ENST00000328270 FYB1O15117 783 aa29.99■■■□□ 2.39
TNRC18-201ENST00000328270 KRT27Q7Z3Y8 459 aa29.99■■■□□ 2.39
TNRC18-201ENST00000328270 TCP11L2Q8N4U5 519 aa29.98■■■□□ 2.39
TNRC18-201ENST00000328270 GGNBP2Q9H3C7 697 aa29.98■■■□□ 2.39
TNRC18-201ENST00000328270 WNK3Q9BYP7 1800 aa29.98■■■□□ 2.39
TNRC18-201ENST00000328270 WDR17Q8IZU2 1322 aa29.97■■■□□ 2.39
TNRC18-201ENST00000328270 BARGINQ6ZT62 677 aa29.97■■■□□ 2.39
TNRC18-201ENST00000328270 C11orf95C9JLR9 678 aaPredicted RBP29.96■■■□□ 2.39
TNRC18-201ENST00000328270 TOM1L2Q6ZVM7 507 aa29.95■■■□□ 2.39
TNRC18-201ENST00000328270 THRAP3Q9Y2W1 955 aaKnown RBP29.95■■■□□ 2.39
TNRC18-201ENST00000328270 PARP4Q9UKK3 1724 aaKnown RBP29.94■■■□□ 2.38
TNRC18-201ENST00000328270 CSB-PGBD3P0DP91 1061 aa29.92■■■□□ 2.38
TNRC18-201ENST00000328270 MAP3K19Q56UN5 1328 aa29.9■■■□□ 2.38
TNRC18-201ENST00000328270 BLMP54132 1417 aaPredicted RBP29.89■■■□□ 2.38
TNRC18-201ENST00000328270 ANKRD26Q9UPS8 1709 aa29.89■■■□□ 2.38
TNRC18-201ENST00000328270 FBLN1P23142 703 aa29.89■■■□□ 2.38
TNRC18-201ENST00000328270 ERBB3P21860 1342 aa29.89■■■□□ 2.38
TNRC18-201ENST00000328270 CGNL1Q0VF96 1302 aa29.88■■■□□ 2.37
TNRC18-201ENST00000328270 LRRC37A3O60309 1634 aa29.87■■■□□ 2.37
TNRC18-201ENST00000328270 IP6K1Q92551 441 aa29.87■■■□□ 2.37
TNRC18-201ENST00000328270 CARD10Q9BWT7 1032 aa29.87■■■□□ 2.37
TNRC18-201ENST00000328270 PANK3Q9H999 370 aa29.87■■■□□ 2.37
TNRC18-201ENST00000328270 FAM208AQ9UK61 1670 aaKnown RBP29.87■■■□□ 2.37
TNRC18-201ENST00000328270 KIF7Q2M1P5 1343 aa29.87■■■□□ 2.37
TNRC18-201ENST00000328270 FAM182BQ5T319 152 aa29.85■■■□□ 2.37
TNRC18-201ENST00000328270 CCDC125Q86Z20 511 aa29.85■■■□□ 2.37
TNRC18-201ENST00000328270 ANKRD24Q8TF21 1146 aa29.85■■■□□ 2.37
TNRC18-201ENST00000328270 RTL1A6NKG5 1358 aa29.83■■■□□ 2.37
TNRC18-201ENST00000328270 CCDC7Q96M83 1385 aa29.83■■■□□ 2.37
TNRC18-201ENST00000328270 AMPHP49418 695 aa29.83■■■□□ 2.37
TNRC18-201ENST00000328270 RRS1Q15050 365 aaKnown RBP29.83■■■□□ 2.37
TNRC18-201ENST00000328270 HOXC9P31274 260 aa29.82■■■□□ 2.36
TNRC18-201ENST00000328270 PEAK1Q9H792 1746 aa29.82■■■□□ 2.36
TNRC18-201ENST00000328270 MAP2P11137 1827 aaKnown RBP29.81■■■□□ 2.36
TNRC18-201ENST00000328270 PDE3BQ13370 1112 aa29.81■■■□□ 2.36
TNRC18-201ENST00000328270 NLRP2Q9NX02 1062 aa29.81■■■□□ 2.36
TNRC18-201ENST00000328270 RGPD2P0DJD1 1756 aa29.81■■■□□ 2.36
TNRC18-201ENST00000328270 RGPD1P0DJD0 1748 aa29.81■■■□□ 2.36
TNRC18-201ENST00000328270 DISP2A7MBM2 1401 aa29.8■■■□□ 2.36
TNRC18-201ENST00000328270 LTV1Q96GA3 475 aaPredicted RBP29.78■■■□□ 2.36
TNRC18-201ENST00000328270 CDCA7Q9BWT1 371 aaPredicted RBP29.78■■■□□ 2.36
TNRC18-201ENST00000328270 TNS1Q9HBL0 1735 aaKnown RBP29.76■■■□□ 2.36
TNRC18-201ENST00000328270 DDB1Q16531 1140 aa29.76■■■□□ 2.35
TNRC18-201ENST00000328270 SF3B2Q13435 895 aaKnown RBP29.75■■■□□ 2.35
TNRC18-201ENST00000328270 FAM196AQ6ZSG2 479 aa29.75■■■□□ 2.35
TNRC18-201ENST00000328270 FLT4P35916 1363 aa29.74■■■□□ 2.35
TNRC18-201ENST00000328270 KIF24Q5T7B8 1368 aa29.74■■■□□ 2.35
TNRC18-201ENST00000328270 NSD2O96028 1365 aa29.73■■■□□ 2.35
TNRC18-201ENST00000328270 SBF2Q86WG5 1849 aa29.71■■■□□ 2.35
TNRC18-201ENST00000328270 EMILIN1Q9Y6C2 1016 aa29.71■■■□□ 2.35
TNRC18-201ENST00000328270 TNS2Q63HR2 1409 aa29.71■■■□□ 2.35
TNRC18-201ENST00000328270 WASHC2AQ641Q2 1341 aa29.71■■■□□ 2.35
TNRC18-201ENST00000328270 INSRP06213 1382 aa29.7■■■□□ 2.35
TNRC18-201ENST00000328270 KNSTRNQ9Y448 316 aa29.7■■■□□ 2.35
TNRC18-201ENST00000328270 OVOS2A0A0G2JMS6 1433 aa29.7■■■□□ 2.34
TNRC18-201ENST00000328270 SMG6Q86US8 1419 aaKnown RBP29.7■■■□□ 2.34
TNRC18-201ENST00000328270 DEFB132Q7Z7B7 95 aa29.69■■■□□ 2.34
TNRC18-201ENST00000328270 IL2RBP14784 551 aa29.68■■■□□ 2.34
TNRC18-201ENST00000328270 HSP90AB2PQ58FF8 381 aa29.68■■■□□ 2.34
TNRC18-201ENST00000328270 TNNT2P45379 298 aaPredicted RBP29.67■■■□□ 2.34
TNRC18-201ENST00000328270 EXOC5O00471 708 aa29.66■■■□□ 2.34
TNRC18-201ENST00000328270 TRIM37O94972 964 aa29.66■■■□□ 2.34
TNRC18-201ENST00000328270 PPM1GO15355 546 aaPredicted RBP29.65■■■□□ 2.34
TNRC18-201ENST00000328270 BAG6P46379 1132 aa29.64■■■□□ 2.34
TNRC18-201ENST00000328270 MARCH10Q8NA82 808 aaPredicted RBP29.64■■■□□ 2.34
TNRC18-201ENST00000328270 POLKQ9UBT6 870 aa29.63■■■□□ 2.33
TNRC18-201ENST00000328270 AMER1Q5JTC6 1135 aaPredicted RBP29.62■■■□□ 2.33
TNRC18-201ENST00000328270 NBPF6Q5VWK0 638 aa29.61■■■□□ 2.33
TNRC18-201ENST00000328270 MORC1Q86VD1 984 aa29.61■■■□□ 2.33
TNRC18-201ENST00000328270 NBPF4Q96M43 638 aa29.61■■■□□ 2.33
TNRC18-201ENST00000328270 PER1O15534 1290 aaPredicted RBP29.59■■■□□ 2.33
TNRC18-201ENST00000328270 BCL9O00512 1426 aa29.59■■■□□ 2.33
TNRC18-201ENST00000328270 MEGF6O75095 1541 aa29.58■■■□□ 2.33
TNRC18-201ENST00000328270 USHBP1Q8N6Y0 703 aa29.58■■■□□ 2.33
TNRC18-201ENST00000328270 KAT6BQ8WYB5 2073 aa29.58■■■□□ 2.33
TNRC18-201ENST00000328270 SHANK3Q9BYB0 1731 aa29.58■■■□□ 2.33
TNRC18-201ENST00000328270 EN1Q05925 392 aaPredicted RBP29.56■■■□□ 2.32
TNRC18-201ENST00000328270 APBA3O96018 575 aa29.54■■■□□ 2.32
TNRC18-201ENST00000328270 NHSQ6T4R5 1651 aa29.52■■■□□ 2.32
TNRC18-201ENST00000328270 NCAPD2Q15021 1401 aa29.52■■■□□ 2.32
TNRC18-201ENST00000328270 RREB1Q92766 1687 aa29.5■■■□□ 2.31
TNRC18-201ENST00000328270 CC2D1BQ5T0F9 858 aaKnown RBP29.5■■■□□ 2.31
TNRC18-201ENST00000328270 RAPGEF4Q8WZA2 1011 aa29.5■■■□□ 2.31
TNRC18-201ENST00000328270 RGPD3A6NKT7 1758 aaPredicted RBP29.49■■■□□ 2.31
TNRC18-201ENST00000328270 RGPD4Q7Z3J3 1758 aa29.49■■■□□ 2.31
TNRC18-201ENST00000328270 NPC1L1Q9UHC9 1359 aa29.49■■■□□ 2.31
TNRC18-201ENST00000328270 EIF4A2Q14240 407 aaKnown RBP29.48■■■□□ 2.31
TNRC18-201ENST00000328270 EZH2Q15910 746 aaKnown RBP29.48■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms