RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 DNA2P51530 1060 aa19.42■□□□□ 0.7
SMAD3-201ENST00000327367 TSR2Q969E8 191 aaKnown RBP19.42■□□□□ 0.7
SMAD3-201ENST00000327367 SYTL4Q96C24 671 aaPredicted RBP19.42■□□□□ 0.7
SMAD3-201ENST00000327367 EPB41L2O43491 1005 aaKnown RBP19.42■□□□□ 0.7
SMAD3-201ENST00000327367 LMAN1P49257 510 aa19.42■□□□□ 0.7
SMAD3-201ENST00000327367 CFAP100Q494V2 611 aa19.41■□□□□ 0.7
SMAD3-201ENST00000327367 ARHGAP29Q52LW3 1261 aa19.41■□□□□ 0.7
SMAD3-201ENST00000327367 KRI1Q8N9T8 703 aaKnown RBP19.41■□□□□ 0.7
SMAD3-201ENST00000327367 CCDC88BA6NC98 1476 aa19.41■□□□□ 0.7
SMAD3-201ENST00000327367 IKQ13123 557 aaPredicted RBP19.41■□□□□ 0.7
SMAD3-201ENST00000327367 RAI14Q9P0K7 980 aa19.41■□□□□ 0.7
SMAD3-201ENST00000327367 TMEM132AQ24JP5 1023 aa19.4■□□□□ 0.7
SMAD3-201ENST00000327367 IQCEQ6IPM2 695 aa19.4■□□□□ 0.7
SMAD3-201ENST00000327367 CEP57L1Q8IYX8 460 aa19.4■□□□□ 0.7
SMAD3-201ENST00000327367 CCDC148Q8NFR7 591 aa19.4■□□□□ 0.7
SMAD3-201ENST00000327367 ANKRD18AQ8IVF6 992 aa19.4■□□□□ 0.7
SMAD3-201ENST00000327367 USP25Q9UHP3 1055 aa19.4■□□□□ 0.7
SMAD3-201ENST00000327367 DACH1Q9UI36 760 aa19.39■□□□□ 0.7
SMAD3-201ENST00000327367 GBP2P32456 591 aaPredicted RBP19.39■□□□□ 0.69
SMAD3-201ENST00000327367 WASHC2AQ641Q2 1341 aa19.39■□□□□ 0.69
SMAD3-201ENST00000327367 WASHC2CQ9Y4E1 1318 aa19.39■□□□□ 0.69
SMAD3-201ENST00000327367 GGNBP2Q9H3C7 697 aa19.38■□□□□ 0.69
SMAD3-201ENST00000327367 MAP3K11Q16584 847 aa19.38■□□□□ 0.69
SMAD3-201ENST00000327367 ATP2C2O75185 946 aa19.38■□□□□ 0.69
SMAD3-201ENST00000327367 EZRP15311 586 aaKnown RBP19.38■□□□□ 0.69
SMAD3-201ENST00000327367 PIP4K2AP48426 406 aaPredicted RBP19.38■□□□□ 0.69
SMAD3-201ENST00000327367 KIF18AQ8NI77 898 aa19.38■□□□□ 0.69
SMAD3-201ENST00000327367 GOPCQ9HD26 462 aa19.38■□□□□ 0.69
SMAD3-201ENST00000327367 PAF1Q8N7H5 531 aa19.37■□□□□ 0.69
SMAD3-201ENST00000327367 FHOD3Q2V2M9 1422 aa19.37■□□□□ 0.69
SMAD3-201ENST00000327367 MNAT1P51948 309 aa19.37■□□□□ 0.69
SMAD3-201ENST00000327367 FERMT3Q86UX7 667 aa19.37■□□□□ 0.69
SMAD3-201ENST00000327367 DDX11Q96FC9 970 aa19.37■□□□□ 0.69
SMAD3-201ENST00000327367 CLIP2Q9UDT6 1046 aa19.37■□□□□ 0.69
SMAD3-201ENST00000327367 SART3Q15020 963 aaKnown RBP19.36■□□□□ 0.69
SMAD3-201ENST00000327367 IGSF3O75054 1194 aa19.36■□□□□ 0.69
SMAD3-201ENST00000327367 TIGD1Q96MW7 591 aa19.36■□□□□ 0.69
SMAD3-201ENST00000327367 PDRG1Q9NUG6 133 aa19.36■□□□□ 0.69
SMAD3-201ENST00000327367 CCDC18Q5T9S5 1454 aa19.36■□□□□ 0.69
SMAD3-201ENST00000327367 JAKMIP3Q5VZ66 844 aa19.36■□□□□ 0.69
SMAD3-201ENST00000327367 SLC26A8Q96RN1 970 aa19.36■□□□□ 0.69
SMAD3-201ENST00000327367 SIL1Q9H173 461 aa19.36■□□□□ 0.69
SMAD3-201ENST00000327367 TCP11L2Q8N4U5 519 aa19.36■□□□□ 0.69
SMAD3-201ENST00000327367 JAKMIP1Q96N16 626 aaKnown RBP19.35■□□□□ 0.69
SMAD3-201ENST00000327367 FAM177BA6PVY3 158 aa19.35■□□□□ 0.69
SMAD3-201ENST00000327367 SSFA2P28290 1259 aa19.35■□□□□ 0.69
SMAD3-201ENST00000327367 UBE4AQ14139 1066 aa19.35■□□□□ 0.69
SMAD3-201ENST00000327367 EVA1CP58658 441 aa19.35■□□□□ 0.69
SMAD3-201ENST00000327367 GCC1Q96CN9 775 aa19.35■□□□□ 0.69
SMAD3-201ENST00000327367 ZNF830Q96NB3 372 aaPredicted RBP19.35■□□□□ 0.69
SMAD3-201ENST00000327367 FAM107BQ9H098 131 aa19.35■□□□□ 0.69
SMAD3-201ENST00000327367 AAMPQ13685 434 aa19.35■□□□□ 0.69
SMAD3-201ENST00000327367 KIF4BQ2VIQ3 1234 aa19.35■□□□□ 0.69
SMAD3-201ENST00000327367 JMYQ8N9B5 988 aa19.35■□□□□ 0.69
SMAD3-201ENST00000327367 LUC7LQ9NQ29 371 aaKnown RBP19.35■□□□□ 0.69
SMAD3-201ENST00000327367 EIF5P55010 431 aaKnown RBP19.34■□□□□ 0.69
SMAD3-201ENST00000327367 NUP133Q8WUM0 1156 aa19.34■□□□□ 0.69
SMAD3-201ENST00000327367 PIBF1Q8WXW3 757 aa19.34■□□□□ 0.69
SMAD3-201ENST00000327367 STIM1Q13586 685 aa19.34■□□□□ 0.69
SMAD3-201ENST00000327367 TAF4BQ92750 862 aa19.34■□□□□ 0.69
SMAD3-201ENST00000327367 CHD1LQ86WJ1 897 aa19.34■□□□□ 0.69
SMAD3-201ENST00000327367 RBM27Q9P2N5 1060 aaKnown RBP19.34■□□□□ 0.69
SMAD3-201ENST00000327367 SFPQP23246 707 aaKnown RBP eCLIP19.33■□□□□ 0.691e-6■■■□□ 17.1
SMAD3-201ENST00000327367 CWC27Q6UX04 472 aaKnown RBP19.33■□□□□ 0.69
SMAD3-201ENST00000327367 SSR1P43307 286 aaKnown RBP19.33■□□□□ 0.69
SMAD3-201ENST00000327367 DHX8Q14562 1220 aaKnown RBP19.33■□□□□ 0.68
SMAD3-201ENST00000327367 ZSWIM4Q9H7M6 989 aa19.33■□□□□ 0.68
SMAD3-201ENST00000327367 TRHP20396 242 aaPredicted RBP19.33■□□□□ 0.68
SMAD3-201ENST00000327367 SERPINA10Q9UK55 444 aa19.32■□□□□ 0.68
SMAD3-201ENST00000327367 CPLX3Q8WVH0 158 aa19.32■□□□□ 0.68
SMAD3-201ENST00000327367 GBP3Q9H0R5 595 aa19.32■□□□□ 0.68
SMAD3-201ENST00000327367 SMTNL1A8MU46 457 aa19.32■□□□□ 0.68
SMAD3-201ENST00000327367 CKAP2LQ8IYA6 745 aa19.32■□□□□ 0.68
SMAD3-201ENST00000327367 LIG1P18858 919 aa19.32■□□□□ 0.68
SMAD3-201ENST00000327367 DNAAF4Q8WXU2 420 aa19.32■□□□□ 0.68
SMAD3-201ENST00000327367 IRX3P78415 501 aaPredicted RBP19.31■□□□□ 0.68
SMAD3-201ENST00000327367 NUTM2GQ5VZR2 741 aa19.31■□□□□ 0.68
SMAD3-201ENST00000327367 CEP63Q96MT8 703 aa19.31■□□□□ 0.68
SMAD3-201ENST00000327367 IFFO1Q0D2I5 559 aa19.31■□□□□ 0.68
SMAD3-201ENST00000327367 SSBP05455 408 aaKnown RBP eCLIP19.31■□□□□ 0.68
SMAD3-201ENST00000327367 CCDC178Q5BJE1 867 aa19.31■□□□□ 0.68
SMAD3-201ENST00000327367 EFCAB2Q5VUJ9 269 aa19.31■□□□□ 0.68
SMAD3-201ENST00000327367 KIF5CO60282 957 aa19.3■□□□□ 0.68
SMAD3-201ENST00000327367 CCDC184Q52MB2 194 aa19.3■□□□□ 0.68
SMAD3-201ENST00000327367 DDX54Q8TDD1 881 aaKnown RBP19.3■□□□□ 0.68
SMAD3-201ENST00000327367 KLHL10Q6JEL2 608 aa19.3■□□□□ 0.68
SMAD3-201ENST00000327367 SMARCC1Q92922 1105 aaPredicted RBP19.3■□□□□ 0.68
SMAD3-201ENST00000327367 CCDC83Q8IWF9 413 aa19.3■□□□□ 0.68
SMAD3-201ENST00000327367 GDPD2Q9HCC8 539 aa19.3■□□□□ 0.68
SMAD3-201ENST00000327367 EID1Q9Y6B2 187 aa19.3■□□□□ 0.68
SMAD3-201ENST00000327367 CTR9Q6PD62 1173 aa19.3■□□□□ 0.68
SMAD3-201ENST00000327367 MTHFSP49914 203 aa19.3■□□□□ 0.68
SMAD3-201ENST00000327367 BRD4O60885 1362 aaPredicted RBP19.29■□□□□ 0.68
SMAD3-201ENST00000327367 TTC39AQ5SRH9 613 aa19.29■□□□□ 0.68
SMAD3-201ENST00000327367 CIZ1Q9ULV3 898 aaPredicted RBP19.29■□□□□ 0.68
SMAD3-201ENST00000327367 TNPO1Q92973 898 aaKnown RBP19.29■□□□□ 0.68
SMAD3-201ENST00000327367 ADCY5O95622 1261 aa19.29■□□□□ 0.68
SMAD3-201ENST00000327367 GNAI2P04899 355 aa19.29■□□□□ 0.68
SMAD3-201ENST00000327367 CASTP20810 708 aaKnown RBP19.29■□□□□ 0.68
SMAD3-201ENST00000327367 LARP6Q9BRS8 491 aaKnown RBP19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms