RNA–Protein interactions for RNA: ENST00000326674.9

PTPMT1-202, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPMT1, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-202ENST00000326674 CRB1P82279 1406 aa28.01■■■□□ 2.07
PTPMT1-202ENST00000326674 USP31Q70CQ4 1352 aa28■■■□□ 2.07
PTPMT1-202ENST00000326674 RGPD1P0DJD0 1748 aa28■■■□□ 2.07
PTPMT1-202ENST00000326674 FAM182BQ5T319 152 aa27.99■■■□□ 2.07
PTPMT1-202ENST00000326674 BARGINQ6ZT62 677 aa27.99■■■□□ 2.07
PTPMT1-202ENST00000326674 ARHGEF25Q86VW2 580 aa27.99■■■□□ 2.07
PTPMT1-202ENST00000326674 CDCA8Q53HL2 280 aa27.98■■■□□ 2.07
PTPMT1-202ENST00000326674 TOM1L2Q6ZVM7 507 aa27.98■■■□□ 2.07
PTPMT1-202ENST00000326674 THRAP3Q9Y2W1 955 aaKnown RBP27.98■■■□□ 2.07
PTPMT1-202ENST00000326674 WNK3Q9BYP7 1800 aa27.97■■■□□ 2.07
PTPMT1-202ENST00000326674 PARP4Q9UKK3 1724 aaKnown RBP27.96■■■□□ 2.07
PTPMT1-202ENST00000326674 CSB-PGBD3P0DP91 1061 aa27.96■■■□□ 2.07
PTPMT1-202ENST00000326674 PDE3BQ13370 1112 aa27.95■■■□□ 2.06
PTPMT1-202ENST00000326674 AXIN2Q9Y2T1 843 aa27.95■■■□□ 2.06
PTPMT1-202ENST00000326674 ABCC6O95255 1503 aa27.95■■■□□ 2.06
PTPMT1-202ENST00000326674 ANKRD36BQ8N2N9 1353 aa27.94■■■□□ 2.06
PTPMT1-202ENST00000326674 WDR17Q8IZU2 1322 aa27.93■■■□□ 2.06
PTPMT1-202ENST00000326674 DEFB132Q7Z7B7 95 aa27.92■■■□□ 2.06
PTPMT1-202ENST00000326674 OVOS2A0A0J9YW53 1432 aa27.92■■■□□ 2.06
PTPMT1-202ENST00000326674 OVOS2Q6IE36 1432 aa27.92■■■□□ 2.06
PTPMT1-202ENST00000326674 MYOM1P52179 1685 aa27.91■■■□□ 2.06
PTPMT1-202ENST00000326674 KIF20BQ96Q89 1820 aa27.9■■■□□ 2.06
PTPMT1-202ENST00000326674 BAG6P46379 1132 aa27.9■■■□□ 2.06
PTPMT1-202ENST00000326674 TNS1Q9HBL0 1735 aaKnown RBP27.89■■■□□ 2.06
PTPMT1-202ENST00000326674 COG3Q96JB2 828 aa27.89■■■□□ 2.06
PTPMT1-202ENST00000326674 LRRC37A3O60309 1634 aa27.89■■■□□ 2.05
PTPMT1-202ENST00000326674 FAM196AQ6ZSG2 479 aa27.88■■■□□ 2.05
PTPMT1-202ENST00000326674 POLR3GLQ9BT43 218 aa27.85■■■□□ 2.05
PTPMT1-202ENST00000326674 EIF4G2P78344 907 aaKnown RBP eCLIP27.83■■■□□ 2.05
PTPMT1-202ENST00000326674 CARD10Q9BWT7 1032 aa27.83■■■□□ 2.05
PTPMT1-202ENST00000326674 TRIM37O94972 964 aa27.82■■■□□ 2.04
PTPMT1-202ENST00000326674 DDB1Q16531 1140 aa27.82■■■□□ 2.04
PTPMT1-202ENST00000326674 CCDC7Q96M83 1385 aa27.82■■■□□ 2.04
PTPMT1-202ENST00000326674 CDCA7Q9BWT1 371 aaPredicted RBP27.8■■■□□ 2.04
PTPMT1-202ENST00000326674 NLRP2Q9NX02 1062 aa27.8■■■□□ 2.04
PTPMT1-202ENST00000326674 FAM208AQ9UK61 1670 aaKnown RBP27.79■■■□□ 2.04
PTPMT1-202ENST00000326674 ERBB3P21860 1342 aa27.79■■■□□ 2.04
PTPMT1-202ENST00000326674 ANKRD24Q8TF21 1146 aa27.79■■■□□ 2.04
PTPMT1-202ENST00000326674 GGNBP2Q9H3C7 697 aa27.79■■■□□ 2.04
PTPMT1-202ENST00000326674 OVOS2A0A0G2JMS6 1433 aa27.78■■■□□ 2.04
PTPMT1-202ENST00000326674 HSPA5P11021 654 aaKnown RBP27.78■■■□□ 2.04
PTPMT1-202ENST00000326674 EN1Q05925 392 aaPredicted RBP27.78■■■□□ 2.04
PTPMT1-202ENST00000326674 SBF2Q86WG5 1849 aa27.76■■■□□ 2.04
PTPMT1-202ENST00000326674 NSD3Q9BZ95 1437 aa27.75■■■□□ 2.03
PTPMT1-202ENST00000326674 PEAK1Q9H792 1746 aa27.75■■■□□ 2.03
PTPMT1-202ENST00000326674 C11orf95C9JLR9 678 aaPredicted RBP27.75■■■□□ 2.03
PTPMT1-202ENST00000326674 FYB1O15117 783 aa27.75■■■□□ 2.03
PTPMT1-202ENST00000326674 APBA3O96018 575 aa27.75■■■□□ 2.03
PTPMT1-202ENST00000326674 AMPHP49418 695 aa27.75■■■□□ 2.03
PTPMT1-202ENST00000326674 IP6K1Q92551 441 aa27.74■■■□□ 2.03
PTPMT1-202ENST00000326674 LTV1Q96GA3 475 aaPredicted RBP27.74■■■□□ 2.03
PTPMT1-202ENST00000326674 DISP2A7MBM2 1401 aa27.74■■■□□ 2.03
PTPMT1-202ENST00000326674 MAP3K19Q56UN5 1328 aa27.73■■■□□ 2.03
PTPMT1-202ENST00000326674 FBLN1P23142 703 aa27.72■■■□□ 2.03
PTPMT1-202ENST00000326674 EXOC5O00471 708 aa27.71■■■□□ 2.03
PTPMT1-202ENST00000326674 RGPD2P0DJD1 1756 aa27.71■■■□□ 2.03
PTPMT1-202ENST00000326674 TNS2Q63HR2 1409 aa27.69■■■□□ 2.02
PTPMT1-202ENST00000326674 HOXC9P31274 260 aa27.69■■■□□ 2.02
PTPMT1-202ENST00000326674 EZH2Q15910 746 aaKnown RBP27.69■■■□□ 2.02
PTPMT1-202ENST00000326674 CARD14Q9BXL6 1004 aa27.69■■■□□ 2.02
PTPMT1-202ENST00000326674 IL2RBP14784 551 aa27.68■■■□□ 2.02
PTPMT1-202ENST00000326674 RRS1Q15050 365 aaKnown RBP27.68■■■□□ 2.02
PTPMT1-202ENST00000326674 RTL1A6NKG5 1358 aa27.68■■■□□ 2.02
PTPMT1-202ENST00000326674 MARCH10Q8NA82 808 aaPredicted RBP27.67■■■□□ 2.02
PTPMT1-202ENST00000326674 RREB1Q92766 1687 aa27.66■■■□□ 2.02
PTPMT1-202ENST00000326674 CGNL1Q0VF96 1302 aa27.65■■■□□ 2.02
PTPMT1-202ENST00000326674 ANKRD26Q9UPS8 1709 aa27.64■■■□□ 2.02
PTPMT1-202ENST00000326674 PARD3Q8TEW0 1356 aa27.64■■■□□ 2.02
PTPMT1-202ENST00000326674 SMG6Q86US8 1419 aaKnown RBP27.64■■■□□ 2.02
PTPMT1-202ENST00000326674 CAMKK2Q96RR4 588 aa27.63■■■□□ 2.01
PTPMT1-202ENST00000326674 NUP188Q5SRE5 1749 aa27.63■■■□□ 2.01
PTPMT1-202ENST00000326674 PSDA5PKW4 1024 aaPredicted RBP27.62■■■□□ 2.01
PTPMT1-202ENST00000326674 MAP2P11137 1827 aaKnown RBP27.61■■■□□ 2.01
PTPMT1-202ENST00000326674 KAT6BQ8WYB5 2073 aa27.61■■■□□ 2.01
PTPMT1-202ENST00000326674 RGPD3A6NKT7 1758 aaPredicted RBP27.6■■■□□ 2.01
PTPMT1-202ENST00000326674 RGPD4Q7Z3J3 1758 aa27.6■■■□□ 2.01
PTPMT1-202ENST00000326674 FLT4P35916 1363 aa27.59■■■□□ 2.01
PTPMT1-202ENST00000326674 BCL11BQ9C0K0 894 aaPredicted RBP27.58■■■□□ 2.01
PTPMT1-202ENST00000326674 BCL9O00512 1426 aa27.58■■■□□ 2
PTPMT1-202ENST00000326674 NHSQ6T4R5 1651 aa27.57■■■□□ 2
PTPMT1-202ENST00000326674 PPM1GO15355 546 aaPredicted RBP27.55■■■□□ 2
PTPMT1-202ENST00000326674 R3HDM1Q15032 1099 aaKnown RBP27.55■■■□□ 2
PTPMT1-202ENST00000326674 PANK3Q9H999 370 aa27.55■■■□□ 2
PTPMT1-202ENST00000326674 KIF24Q5T7B8 1368 aa27.55■■■□□ 2
PTPMT1-202ENST00000326674 INSRP06213 1382 aa27.54■■■□□ 2
PTPMT1-202ENST00000326674 HSP90AB2PQ58FF8 381 aa27.53■■■□□ 2
PTPMT1-202ENST00000326674 EMILIN1Q9Y6C2 1016 aa27.53■■■□□ 2
PTPMT1-202ENST00000326674 NBPF14Q5TI25 921 aa27.52■■■□□ 2
PTPMT1-202ENST00000326674 PTF1AQ7RTS3 328 aa27.52■■■□□ 2
PTPMT1-202ENST00000326674 USHBP1Q8N6Y0 703 aa27.52■■■□□ 2
PTPMT1-202ENST00000326674 ACSBG1Q96GR2 724 aa27.52■■■□□ 2
PTPMT1-202ENST00000326674 DDX54Q8TDD1 881 aaKnown RBP27.51■■□□□ 1.99
PTPMT1-202ENST00000326674 PLSCR1O15162 318 aa27.5■■□□□ 1.99
PTPMT1-202ENST00000326674 TNNT2P45379 298 aaPredicted RBP27.5■■□□□ 1.99
PTPMT1-202ENST00000326674 NBPF6Q5VWK0 638 aa27.5■■□□□ 1.99
PTPMT1-202ENST00000326674 NBPF4Q96M43 638 aa27.5■■□□□ 1.99
PTPMT1-202ENST00000326674 BTAF1O14981 1849 aa27.5■■□□□ 1.99
PTPMT1-202ENST00000326674 SHANK3Q9BYB0 1731 aa27.5■■□□□ 1.99
PTPMT1-202ENST00000326674 MEGF6O75095 1541 aa27.49■■□□□ 1.99
PTPMT1-202ENST00000326674 LRP5O75197 1615 aa27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms