RNA–Protein interactions for RNA: ENST00000326656.12

PTPMT1-201, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-201ENST00000326656 TOM1L2Q6ZVM7 507 aa25.07■■□□□ 1.6
PTPMT1-201ENST00000326656 AXIN2Q9Y2T1 843 aa25.07■■□□□ 1.6
PTPMT1-201ENST00000326656 USP31Q70CQ4 1352 aa25.06■■□□□ 1.6
PTPMT1-201ENST00000326656 EZH2Q15910 746 aaKnown RBP25.06■■□□□ 1.6
PTPMT1-201ENST00000326656 LRP5O75197 1615 aa25.04■■□□□ 1.6
PTPMT1-201ENST00000326656 ABCC6O95255 1503 aa25.04■■□□□ 1.6
PTPMT1-201ENST00000326656 HDGFL2Q7Z4V5 671 aaPredicted RBP25.04■■□□□ 1.6
PTPMT1-201ENST00000326656 TERF2IPQ9NYB0 399 aa25.04■■□□□ 1.6
PTPMT1-201ENST00000326656 DDB1Q16531 1140 aa25.03■■□□□ 1.6
PTPMT1-201ENST00000326656 TMC1Q8TDI8 760 aa25.03■■□□□ 1.6
PTPMT1-201ENST00000326656 CARD10Q9BWT7 1032 aa25.03■■□□□ 1.6
PTPMT1-201ENST00000326656 NFAT5O94916 1531 aa25.02■■□□□ 1.6
PTPMT1-201ENST00000326656 CD163L1Q9NR16 1453 aa25.02■■□□□ 1.6
PTPMT1-201ENST00000326656 SLC12A5Q9H2X9 1139 aa25.01■■□□□ 1.59
PTPMT1-201ENST00000326656 OVOS2A0A0G2JMS6 1433 aa25.01■■□□□ 1.59
PTPMT1-201ENST00000326656 OVOS2A0A0J9YW53 1432 aa25.01■■□□□ 1.59
PTPMT1-201ENST00000326656 OVOS2Q6IE36 1432 aa25.01■■□□□ 1.59
PTPMT1-201ENST00000326656 USP54Q70EL1 1684 aa25.01■■□□□ 1.59
PTPMT1-201ENST00000326656 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25■■□□□ 1.59
PTPMT1-201ENST00000326656 SOX12O15370 315 aa24.99■■□□□ 1.59
PTPMT1-201ENST00000326656 EDC4Q6P2E9 1401 aaKnown RBP24.99■■□□□ 1.59
PTPMT1-201ENST00000326656 RGPD5Q99666 1765 aa24.99■■□□□ 1.59
PTPMT1-201ENST00000326656 NINLQ9Y2I6 1382 aa24.99■■□□□ 1.59
PTPMT1-201ENST00000326656 CSB-PGBD3P0DP91 1061 aa24.98■■□□□ 1.59
PTPMT1-201ENST00000326656 R3HDM1Q15032 1099 aaKnown RBP24.98■■□□□ 1.59
PTPMT1-201ENST00000326656 PEAK1Q9H792 1746 aa24.98■■□□□ 1.59
PTPMT1-201ENST00000326656 CCDC7Q96M83 1385 aa24.97■■□□□ 1.59
PTPMT1-201ENST00000326656 LRRC37A3O60309 1634 aa24.97■■□□□ 1.59
PTPMT1-201ENST00000326656 BCL9O00512 1426 aa24.96■■□□□ 1.59
PTPMT1-201ENST00000326656 NBPF14Q5TI25 921 aa24.96■■□□□ 1.59
PTPMT1-201ENST00000326656 NME9Q86XW9 330 aa24.96■■□□□ 1.59
PTPMT1-201ENST00000326656 TESK2Q96S53 571 aa24.96■■□□□ 1.59
PTPMT1-201ENST00000326656 ST20-MTHFSA0A0A6YYL1 179 aa24.95■■□□□ 1.58
PTPMT1-201ENST00000326656 WNK3Q9BYP7 1800 aa24.95■■□□□ 1.58
PTPMT1-201ENST00000326656 RREB1Q92766 1687 aa24.94■■□□□ 1.58
PTPMT1-201ENST00000326656 PLSCR1O15162 318 aa24.94■■□□□ 1.58
PTPMT1-201ENST00000326656 EXOC5O00471 708 aa24.93■■□□□ 1.58
PTPMT1-201ENST00000326656 BCL11BQ9C0K0 894 aaPredicted RBP24.93■■□□□ 1.58
PTPMT1-201ENST00000326656 SBF2Q86WG5 1849 aa24.93■■□□□ 1.58
PTPMT1-201ENST00000326656 A0A1W2PP64 1363 aa24.93■■□□□ 1.58
PTPMT1-201ENST00000326656 RGPD3A6NKT7 1758 aaPredicted RBP24.91■■□□□ 1.58
PTPMT1-201ENST00000326656 RGPD4Q7Z3J3 1758 aa24.91■■□□□ 1.58
PTPMT1-201ENST00000326656 MARCH10Q8NA82 808 aaPredicted RBP24.91■■□□□ 1.58
PTPMT1-201ENST00000326656 NUP188Q5SRE5 1749 aa24.89■■□□□ 1.58
PTPMT1-201ENST00000326656 ERBB3P21860 1342 aa24.89■■□□□ 1.58
PTPMT1-201ENST00000326656 LTN1O94822 1766 aa24.88■■□□□ 1.57
PTPMT1-201ENST00000326656 TIMELESSQ9UNS1 1208 aa24.87■■□□□ 1.57
PTPMT1-201ENST00000326656 NLRP2Q9NX02 1062 aa24.85■■□□□ 1.57
PTPMT1-201ENST00000326656 TMF1P82094 1093 aa24.84■■□□□ 1.57
PTPMT1-201ENST00000326656 IP6K1Q92551 441 aa24.84■■□□□ 1.57
PTPMT1-201ENST00000326656 ANKRD24Q8TF21 1146 aa24.83■■□□□ 1.57
PTPMT1-201ENST00000326656 TNS2Q63HR2 1409 aa24.83■■□□□ 1.57
PTPMT1-201ENST00000326656 IL2RBP14784 551 aa24.82■■□□□ 1.56
PTPMT1-201ENST00000326656 CDCA8Q53HL2 280 aa24.82■■□□□ 1.56
PTPMT1-201ENST00000326656 COG3Q96JB2 828 aa24.82■■□□□ 1.56
PTPMT1-201ENST00000326656 ANKRD36BQ8N2N9 1353 aa24.81■■□□□ 1.56
PTPMT1-201ENST00000326656 USP47Q96K76 1375 aa24.8■■□□□ 1.56
PTPMT1-201ENST00000326656 CLSPNQ9HAW4 1339 aa24.8■■□□□ 1.56
PTPMT1-201ENST00000326656 PTF1AQ7RTS3 328 aa24.79■■□□□ 1.56
PTPMT1-201ENST00000326656 PROM2Q8N271 834 aa24.77■■□□□ 1.56
PTPMT1-201ENST00000326656 FAM208AQ9UK61 1670 aaKnown RBP24.76■■□□□ 1.55
PTPMT1-201ENST00000326656 SPON1Q9HCB6 807 aa24.75■■□□□ 1.55
PTPMT1-201ENST00000326656 MAP3K19Q56UN5 1328 aa24.74■■□□□ 1.55
PTPMT1-201ENST00000326656 KCNQ2O43526 872 aa24.73■■□□□ 1.55
PTPMT1-201ENST00000326656 TXNRD1Q16881 649 aa24.73■■□□□ 1.55
PTPMT1-201ENST00000326656 FYB1O15117 783 aa24.72■■□□□ 1.55
PTPMT1-201ENST00000326656 HOXC9P31274 260 aa24.72■■□□□ 1.55
PTPMT1-201ENST00000326656 AMPHP49418 695 aa24.72■■□□□ 1.55
PTPMT1-201ENST00000326656 NHSQ6T4R5 1651 aa24.72■■□□□ 1.55
PTPMT1-201ENST00000326656 RTL1A6NKG5 1358 aa24.69■■□□□ 1.54
PTPMT1-201ENST00000326656 LTV1Q96GA3 475 aaPredicted RBP24.68■■□□□ 1.54
PTPMT1-201ENST00000326656 ANO8Q9HCE9 1232 aaPredicted RBP24.68■■□□□ 1.54
PTPMT1-201ENST00000326656 STK32BQ9NY57 414 aa24.68■■□□□ 1.54
PTPMT1-201ENST00000326656 KAT6BQ8WYB5 2073 aa24.66■■□□□ 1.54
PTPMT1-201ENST00000326656 SLC15A2Q16348 729 aa24.65■■□□□ 1.54
PTPMT1-201ENST00000326656 ACSBG1Q96GR2 724 aa24.65■■□□□ 1.54
PTPMT1-201ENST00000326656 GGNBP2Q9H3C7 697 aa24.65■■□□□ 1.54
PTPMT1-201ENST00000326656 PPP1R1BQ9UD71 204 aaPredicted RBP24.65■■□□□ 1.54
PTPMT1-201ENST00000326656 KIF24Q5T7B8 1368 aa24.65■■□□□ 1.54
PTPMT1-201ENST00000326656 FBLN1P23142 703 aa24.64■■□□□ 1.54
PTPMT1-201ENST00000326656 CASZ1Q86V15 1759 aa24.64■■□□□ 1.53
PTPMT1-201ENST00000326656 DDX54Q8TDD1 881 aaKnown RBP24.63■■□□□ 1.53
PTPMT1-201ENST00000326656 CGNL1Q0VF96 1302 aa24.62■■□□□ 1.53
PTPMT1-201ENST00000326656 PCGF6Q9BYE7 350 aa24.62■■□□□ 1.53
PTPMT1-201ENST00000326656 BTAF1O14981 1849 aa24.62■■□□□ 1.53
PTPMT1-201ENST00000326656 RRS1Q15050 365 aaKnown RBP24.61■■□□□ 1.53
PTPMT1-201ENST00000326656 ZCRB1Q8TBF4 217 aaKnown RBP24.6■■□□□ 1.53
PTPMT1-201ENST00000326656 KIF20BQ96Q89 1820 aa24.6■■□□□ 1.53
PTPMT1-201ENST00000326656 SMG6Q86US8 1419 aaKnown RBP24.6■■□□□ 1.53
PTPMT1-201ENST00000326656 INSRP06213 1382 aa24.59■■□□□ 1.53
PTPMT1-201ENST00000326656 CARD14Q9BXL6 1004 aa24.59■■□□□ 1.53
PTPMT1-201ENST00000326656 SLC27A3Q5K4L6 730 aa24.58■■□□□ 1.53
PTPMT1-201ENST00000326656 NBPF6Q5VWK0 638 aa24.58■■□□□ 1.53
PTPMT1-201ENST00000326656 NBPF4Q96M43 638 aa24.58■■□□□ 1.53
PTPMT1-201ENST00000326656 RGPD2P0DJD1 1756 aa24.57■■□□□ 1.52
PTPMT1-201ENST00000326656 FLT4P35916 1363 aa24.56■■□□□ 1.52
PTPMT1-201ENST00000326656 PDGFDQ9GZP0 370 aaPredicted RBP24.56■■□□□ 1.52
PTPMT1-201ENST00000326656 DCAF8L1A6NGE4 600 aa24.55■■□□□ 1.52
PTPMT1-201ENST00000326656 YY1P25490 414 aa24.55■■□□□ 1.52
PTPMT1-201ENST00000326656 RAPGEF4Q8WZA2 1011 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms