RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 PHLPP1O60346 1717 aa20.41■□□□□ 0.86
PRPF3-201ENST00000324862 HAP1P54257 671 aaPredicted RBP20.4■□□□□ 0.86
PRPF3-201ENST00000324862 INSRP06213 1382 aa20.4■□□□□ 0.86
PRPF3-201ENST00000324862 KIAA0232Q92628 1395 aa20.4■□□□□ 0.86
PRPF3-201ENST00000324862 PHRF1Q9P1Y6 1649 aaKnown RBP20.4■□□□□ 0.86
PRPF3-201ENST00000324862 HMOX1P09601 288 aa20.39■□□□□ 0.85
PRPF3-201ENST00000324862 SALL2Q9Y467 1007 aaPredicted RBP20.39■□□□□ 0.85
PRPF3-201ENST00000324862 CRYBG1Q9Y4K1 1723 aa20.38■□□□□ 0.85
PRPF3-201ENST00000324862 LTN1O94822 1766 aa20.38■□□□□ 0.85
PRPF3-201ENST00000324862 IP6K1Q92551 441 aa20.37■□□□□ 0.85
PRPF3-201ENST00000324862 HSPA1LP34931 641 aa20.36■□□□□ 0.85
PRPF3-201ENST00000324862 AEBP1Q8IUX7 1158 aa20.36■□□□□ 0.85
PRPF3-201ENST00000324862 NUDCQ9Y266 331 aa20.36■□□□□ 0.85
PRPF3-201ENST00000324862 NUTM2BA6NNL0 878 aaPredicted RBP20.34■□□□□ 0.85
PRPF3-201ENST00000324862 NUTM2EB1AL46 878 aaPredicted RBP20.34■□□□□ 0.85
PRPF3-201ENST00000324862 NUTM2AQ8IVF1 878 aaPredicted RBP20.34■□□□□ 0.85
PRPF3-201ENST00000324862 PRDM11Q9NQV5 511 aa20.34■□□□□ 0.85
PRPF3-201ENST00000324862 USHBP1Q8N6Y0 703 aa20.33■□□□□ 0.85
PRPF3-201ENST00000324862 EYA1Q99502 592 aa20.33■□□□□ 0.84
PRPF3-201ENST00000324862 BLMP54132 1417 aaPredicted RBP20.32■□□□□ 0.84
PRPF3-201ENST00000324862 ADAMTS2O95450 1211 aa20.32■□□□□ 0.84
PRPF3-201ENST00000324862 ABCA3Q99758 1704 aa20.32■□□□□ 0.84
PRPF3-201ENST00000324862 RTL1A6NKG5 1358 aa20.32■□□□□ 0.84
PRPF3-201ENST00000324862 FAM83GA6ND36 823 aa20.32■□□□□ 0.84
PRPF3-201ENST00000324862 SULT6B1Q6IMI4 303 aa20.32■□□□□ 0.84
PRPF3-201ENST00000324862 KIF24Q5T7B8 1368 aa20.31■□□□□ 0.84
PRPF3-201ENST00000324862 ANKRD24Q8TF21 1146 aa20.31■□□□□ 0.84
PRPF3-201ENST00000324862 APAF1O14727 1248 aa20.31■□□□□ 0.84
PRPF3-201ENST00000324862 CPDO75976 1380 aa20.3■□□□□ 0.84
PRPF3-201ENST00000324862 NBPF6Q5VWK0 638 aa20.3■□□□□ 0.84
PRPF3-201ENST00000324862 NBPF4Q96M43 638 aa20.3■□□□□ 0.84
PRPF3-201ENST00000324862 RSPH6AQ9H0K4 717 aa20.3■□□□□ 0.84
PRPF3-201ENST00000324862 RRP7AQ9Y3A4 280 aaKnown RBP20.3■□□□□ 0.84
PRPF3-201ENST00000324862 PRKAR2BP31323 418 aa20.29■□□□□ 0.84
PRPF3-201ENST00000324862 PLEKHF1Q96S99 279 aa20.29■□□□□ 0.84
PRPF3-201ENST00000324862 NEUROD2Q15784 382 aa20.28■□□□□ 0.84
PRPF3-201ENST00000324862 PHACTR3Q96KR7 559 aa20.28■□□□□ 0.84
PRPF3-201ENST00000324862 ERBB3P21860 1342 aa20.28■□□□□ 0.84
PRPF3-201ENST00000324862 RGPD5Q99666 1765 aa20.27■□□□□ 0.84
PRPF3-201ENST00000324862 COL22A1Q8NFW1 1626 aaPredicted RBP20.27■□□□□ 0.84
PRPF3-201ENST00000324862 COL18A1P39060 1754 aa20.26■□□□□ 0.83
PRPF3-201ENST00000324862 CAMTA1Q9Y6Y1 1673 aa20.26■□□□□ 0.83
PRPF3-201ENST00000324862 RUNDC1Q96C34 613 aa20.26■□□□□ 0.83
PRPF3-201ENST00000324862 IGSF1Q8N6C5 1336 aa20.26■□□□□ 0.83
PRPF3-201ENST00000324862 TCP11L2Q8N4U5 519 aa20.25■□□□□ 0.83
PRPF3-201ENST00000324862 FCHSD2O94868 740 aa20.25■□□□□ 0.83
PRPF3-201ENST00000324862 JCADQ9P266 1359 aa20.25■□□□□ 0.83
PRPF3-201ENST00000324862 STRN4Q9NRL3 753 aa20.24■□□□□ 0.83
PRPF3-201ENST00000324862 RGPD1P0DJD0 1748 aa20.24■□□□□ 0.83
PRPF3-201ENST00000324862 CSB-PGBD3P0DP91 1061 aa20.24■□□□□ 0.83
PRPF3-201ENST00000324862 BTG4Q9NY30 223 aa20.24■□□□□ 0.83
PRPF3-201ENST00000324862 NLRP2Q9NX02 1062 aa20.23■□□□□ 0.83
PRPF3-201ENST00000324862 RGPD2P0DJD1 1756 aa20.22■□□□□ 0.83
PRPF3-201ENST00000324862 LARP1Q6PKG0 1096 aaKnown RBP20.21■□□□□ 0.83
PRPF3-201ENST00000324862 LMO7Q8WWI1 1683 aa20.2■□□□□ 0.82
PRPF3-201ENST00000324862 ZBED9Q6R2W3 1325 aa20.2■□□□□ 0.82
PRPF3-201ENST00000324862 MAPK8IP3Q9UPT6 1336 aa20.2■□□□□ 0.82
PRPF3-201ENST00000324862 KDRP35968 1356 aa20.2■□□□□ 0.82
PRPF3-201ENST00000324862 COL5A2P05997 1499 aaPredicted RBP20.2■□□□□ 0.82
PRPF3-201ENST00000324862 LRP6O75581 1613 aa20.19■□□□□ 0.82
PRPF3-201ENST00000324862 USP35Q9P2H5 1018 aa20.18■□□□□ 0.82
PRPF3-201ENST00000324862 TMPOP42166 694 aaKnown RBP20.18■□□□□ 0.82
PRPF3-201ENST00000324862 EVA1CP58658 441 aa20.17■□□□□ 0.82
PRPF3-201ENST00000324862 TOM1L2Q6ZVM7 507 aa20.17■□□□□ 0.82
PRPF3-201ENST00000324862 C8orf37Q96NL8 207 aa20.17■□□□□ 0.82
PRPF3-201ENST00000324862 CDCA7LQ96GN5 454 aa20.17■□□□□ 0.82
PRPF3-201ENST00000324862 WDR17Q8IZU2 1322 aa20.16■□□□□ 0.82
PRPF3-201ENST00000324862 RIPK4P57078 832 aa20.15■□□□□ 0.82
PRPF3-201ENST00000324862 MTHFSDQ2M296 383 aaKnown RBP20.15■□□□□ 0.82
PRPF3-201ENST00000324862 ABCC6O95255 1503 aa20.14■□□□□ 0.81
PRPF3-201ENST00000324862 PNNQ9H307 717 aaKnown RBP20.14■□□□□ 0.81
PRPF3-201ENST00000324862 TRIM35Q9UPQ4 493 aa20.14■□□□□ 0.81
PRPF3-201ENST00000324862 WWC1Q8IX03 1113 aa20.13■□□□□ 0.81
PRPF3-201ENST00000324862 SPINK5Q9NQ38 1064 aaPredicted RBP20.13■□□□□ 0.81
PRPF3-201ENST00000324862 NEFMP07197 916 aa20.13■□□□□ 0.81
PRPF3-201ENST00000324862 THUMPD2Q9BTF0 503 aaKnown RBP20.13■□□□□ 0.81
PRPF3-201ENST00000324862 SPATA31A6Q5VVP1 1343 aa20.13■□□□□ 0.81
PRPF3-201ENST00000324862 DCTN1Q14203 1278 aa20.12■□□□□ 0.81
PRPF3-201ENST00000324862 NFE2L2Q16236 605 aa20.12■□□□□ 0.81
PRPF3-201ENST00000324862 NGLY1Q96IV0 654 aa20.12■□□□□ 0.81
PRPF3-201ENST00000324862 ZNF521Q96K83 1311 aa20.12■□□□□ 0.81
PRPF3-201ENST00000324862 COL14A1Q05707 1796 aaKnown RBP20.12■□□□□ 0.81
PRPF3-201ENST00000324862 NCAPD2Q15021 1401 aa20.11■□□□□ 0.81
PRPF3-201ENST00000324862 MEGF6O75095 1541 aa20.1■□□□□ 0.81
PRPF3-201ENST00000324862 FAM208AQ9UK61 1670 aaKnown RBP20.1■□□□□ 0.81
PRPF3-201ENST00000324862 PHF23Q9BUL5 403 aaPredicted RBP20.09■□□□□ 0.81
PRPF3-201ENST00000324862 PLCH1Q4KWH8 1693 aa20.09■□□□□ 0.81
PRPF3-201ENST00000324862 MEX3CQ5U5Q3 659 aaKnown RBP20.08■□□□□ 0.8
PRPF3-201ENST00000324862 SLIT2O94813 1529 aa20.08■□□□□ 0.8
PRPF3-201ENST00000324862 RAPGEF4Q8WZA2 1011 aa20.07■□□□□ 0.8
PRPF3-201ENST00000324862 CARD10Q9BWT7 1032 aa20.07■□□□□ 0.8
PRPF3-201ENST00000324862 CENPBP07199 599 aaPredicted RBP20.07■□□□□ 0.8
PRPF3-201ENST00000324862 MCM10Q7L590 875 aa20.07■□□□□ 0.8
PRPF3-201ENST00000324862 CRB1P82279 1406 aa20.07■□□□□ 0.8
PRPF3-201ENST00000324862 FBXO41Q8TF61 875 aa20.06■□□□□ 0.8
PRPF3-201ENST00000324862 BCL9LQ86UU0 1499 aa20.06■□□□□ 0.8
PRPF3-201ENST00000324862 CCDC9Q9Y3X0 531 aaKnown RBP20.05■□□□□ 0.8
PRPF3-201ENST00000324862 GOLGA2Q08379 1002 aa20.04■□□□□ 0.8
PRPF3-201ENST00000324862 CCDC27Q2M243 656 aa20.04■□□□□ 0.8
PRPF3-201ENST00000324862 TATP17735 454 aaPredicted RBP20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms