RNA–Protein interactions for RNA: ENST00000324677.11

SSH2-202, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-202ENST00000324677 C11orf95C9JLR9 678 aaPredicted RBP28.32■■■□□ 2.12
SSH2-202ENST00000324677 ARHGEF25Q86VW2 580 aa28.32■■■□□ 2.12
SSH2-202ENST00000324677 KCNH5Q8NCM2 988 aa28.32■■■□□ 2.12
SSH2-202ENST00000324677 WDR17Q8IZU2 1322 aa28.31■■■□□ 2.12
SSH2-202ENST00000324677 KTN1Q86UP2 1357 aaKnown RBP28.31■■■□□ 2.12
SSH2-202ENST00000324677 SBNO2Q9Y2G9 1366 aa28.31■■■□□ 2.12
SSH2-202ENST00000324677 OVOS2A0A0G2JMS6 1433 aa28.31■■■□□ 2.12
SSH2-202ENST00000324677 OVOS2A0A0J9YW53 1432 aa28.31■■■□□ 2.12
SSH2-202ENST00000324677 OVOS2Q6IE36 1432 aa28.31■■■□□ 2.12
SSH2-202ENST00000324677 NFAT5O94916 1531 aa28.29■■■□□ 2.12
SSH2-202ENST00000324677 DDB1Q16531 1140 aa28.28■■■□□ 2.12
SSH2-202ENST00000324677 RGPD3A6NKT7 1758 aaPredicted RBP28.27■■■□□ 2.12
SSH2-202ENST00000324677 RGPD4Q7Z3J3 1758 aa28.27■■■□□ 2.12
SSH2-202ENST00000324677 SOX12O15370 315 aa28.27■■■□□ 2.12
SSH2-202ENST00000324677 CARD11Q9BXL7 1154 aa28.26■■■□□ 2.11
SSH2-202ENST00000324677 USP54Q70EL1 1684 aa28.26■■■□□ 2.11
SSH2-202ENST00000324677 NBPF14Q5TI25 921 aa28.25■■■□□ 2.11
SSH2-202ENST00000324677 CDCA7Q9BWT1 371 aaPredicted RBP28.23■■■□□ 2.11
SSH2-202ENST00000324677 ABCC6O95255 1503 aa28.23■■■□□ 2.11
SSH2-202ENST00000324677 CD163L1Q9NR16 1453 aa28.22■■■□□ 2.11
SSH2-202ENST00000324677 CARD10Q9BWT7 1032 aa28.22■■■□□ 2.11
SSH2-202ENST00000324677 CSB-PGBD3P0DP91 1061 aa28.21■■■□□ 2.11
SSH2-202ENST00000324677 LTN1O94822 1766 aa28.2■■■□□ 2.11
SSH2-202ENST00000324677 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.2■■■□□ 2.1
SSH2-202ENST00000324677 USP31Q70CQ4 1352 aa28.2■■■□□ 2.1
SSH2-202ENST00000324677 PLSCR1O15162 318 aa28.19■■■□□ 2.1
SSH2-202ENST00000324677 MARCH10Q8NA82 808 aaPredicted RBP28.19■■■□□ 2.1
SSH2-202ENST00000324677 TONSLQ96HA7 1378 aa28.18■■■□□ 2.1
SSH2-202ENST00000324677 BCL9O00512 1426 aa28.18■■■□□ 2.1
SSH2-202ENST00000324677 BCL11BQ9C0K0 894 aaPredicted RBP28.17■■■□□ 2.1
SSH2-202ENST00000324677 TMC1Q8TDI8 760 aa28.16■■■□□ 2.1
SSH2-202ENST00000324677 CCDC7Q96M83 1385 aa28.15■■■□□ 2.1
SSH2-202ENST00000324677 PTF1AQ7RTS3 328 aa28.15■■■□□ 2.1
SSH2-202ENST00000324677 NME9Q86XW9 330 aa28.15■■■□□ 2.1
SSH2-202ENST00000324677 SLC12A5Q9H2X9 1139 aa28.14■■■□□ 2.1
SSH2-202ENST00000324677 HDGFL2Q7Z4V5 671 aaPredicted RBP28.13■■■□□ 2.09
SSH2-202ENST00000324677 EDC4Q6P2E9 1401 aaKnown RBP28.12■■■□□ 2.09
SSH2-202ENST00000324677 EXOC5O00471 708 aa28.12■■■□□ 2.09
SSH2-202ENST00000324677 PUS7Q96PZ0 661 aaKnown RBP28.1■■■□□ 2.09
SSH2-202ENST00000324677 TNS2Q63HR2 1409 aa28.09■■■□□ 2.09
SSH2-202ENST00000324677 TERF2IPQ9NYB0 399 aa28.09■■■□□ 2.09
SSH2-202ENST00000324677 ERBB3P21860 1342 aa28.09■■■□□ 2.09
SSH2-202ENST00000324677 A0A1W2PP64 1363 aa28.09■■■□□ 2.09
SSH2-202ENST00000324677 PROM2Q8N271 834 aa28.07■■■□□ 2.08
SSH2-202ENST00000324677 SPON1Q9HCB6 807 aa28.07■■■□□ 2.08
SSH2-202ENST00000324677 CASZ1Q86V15 1759 aa28.06■■■□□ 2.08
SSH2-202ENST00000324677 ANO8Q9HCE9 1232 aaPredicted RBP28.06■■■□□ 2.08
SSH2-202ENST00000324677 KCNQ2O43526 872 aa28.05■■■□□ 2.08
SSH2-202ENST00000324677 NHSQ6T4R5 1651 aa28.05■■■□□ 2.08
SSH2-202ENST00000324677 NLRP2Q9NX02 1062 aa28.05■■■□□ 2.08
SSH2-202ENST00000324677 TESK2Q96S53 571 aa28.03■■■□□ 2.08
SSH2-202ENST00000324677 ANKRD24Q8TF21 1146 aa28.02■■■□□ 2.08
SSH2-202ENST00000324677 KAT6BQ8WYB5 2073 aa28.02■■■□□ 2.08
SSH2-202ENST00000324677 ST20-MTHFSA0A0A6YYL1 179 aa28.01■■■□□ 2.07
SSH2-202ENST00000324677 NINLQ9Y2I6 1382 aa28■■■□□ 2.07
SSH2-202ENST00000324677 IL2RBP14784 551 aa28■■■□□ 2.07
SSH2-202ENST00000324677 TXNRD1Q16881 649 aa28■■■□□ 2.07
SSH2-202ENST00000324677 PPP1R1BQ9UD71 204 aaPredicted RBP28■■■□□ 2.07
SSH2-202ENST00000324677 FAM208AQ9UK61 1670 aaKnown RBP27.99■■■□□ 2.07
SSH2-202ENST00000324677 SLC24A1O60721 1099 aa27.96■■■□□ 2.07
SSH2-202ENST00000324677 IP6K1Q92551 441 aa27.96■■■□□ 2.07
SSH2-202ENST00000324677 PDGFDQ9GZP0 370 aaPredicted RBP27.96■■■□□ 2.07
SSH2-202ENST00000324677 BTAF1O14981 1849 aa27.96■■■□□ 2.07
SSH2-202ENST00000324677 ACSBG1Q96GR2 724 aa27.95■■■□□ 2.06
SSH2-202ENST00000324677 STK32BQ9NY57 414 aa27.94■■■□□ 2.06
SSH2-202ENST00000324677 SLC15A2Q16348 729 aa27.91■■■□□ 2.06
SSH2-202ENST00000324677 COG3Q96JB2 828 aa27.91■■■□□ 2.06
SSH2-202ENST00000324677 RGPD2P0DJD1 1756 aa27.91■■■□□ 2.06
SSH2-202ENST00000324677 ZBTB7AO95365 584 aa27.89■■■□□ 2.06
SSH2-202ENST00000324677 LTV1Q96GA3 475 aaPredicted RBP27.89■■■□□ 2.06
SSH2-202ENST00000324677 PAPPAQ13219 1627 aa27.89■■■□□ 2.05
SSH2-202ENST00000324677 ANKRD36BQ8N2N9 1353 aa27.88■■■□□ 2.05
SSH2-202ENST00000324677 MAP3K19Q56UN5 1328 aa27.88■■■□□ 2.05
SSH2-202ENST00000324677 MYOM1P52179 1685 aa27.87■■■□□ 2.05
SSH2-202ENST00000324677 HOXC9P31274 260 aa27.86■■■□□ 2.05
SSH2-202ENST00000324677 FBLN1P23142 703 aa27.85■■■□□ 2.05
SSH2-202ENST00000324677 TRIM26Q12899 539 aaPredicted RBP27.85■■■□□ 2.05
SSH2-202ENST00000324677 PTGER2P43116 358 aa27.84■■■□□ 2.05
SSH2-202ENST00000324677 AMPHP49418 695 aa27.84■■■□□ 2.05
SSH2-202ENST00000324677 ATF5Q9Y2D1 282 aaPredicted RBP27.84■■■□□ 2.05
SSH2-202ENST00000324677 USP47Q96K76 1375 aa27.84■■■□□ 2.05
SSH2-202ENST00000324677 TMF1P82094 1093 aa27.83■■■□□ 2.05
SSH2-202ENST00000324677 DDX54Q8TDD1 881 aaKnown RBP27.83■■■□□ 2.05
SSH2-202ENST00000324677 SHANK3Q9BYB0 1731 aa27.83■■■□□ 2.05
SSH2-202ENST00000324677 DCAF8L1A6NGE4 600 aa27.82■■■□□ 2.04
SSH2-202ENST00000324677 KIF20BQ96Q89 1820 aa27.81■■■□□ 2.04
SSH2-202ENST00000324677 YY1P25490 414 aa27.8■■■□□ 2.04
SSH2-202ENST00000324677 MTFR1LQ9H019 292 aa27.8■■■□□ 2.04
SSH2-202ENST00000324677 DOT1LQ8TEK3 1739 aa27.8■■■□□ 2.04
SSH2-202ENST00000324677 RTL1A6NKG5 1358 aa27.79■■■□□ 2.04
SSH2-202ENST00000324677 FYB1O15117 783 aa27.79■■■□□ 2.04
SSH2-202ENST00000324677 GGNBP2Q9H3C7 697 aa27.78■■■□□ 2.04
SSH2-202ENST00000324677 LRRC4BQ9NT99 713 aa27.78■■■□□ 2.04
SSH2-202ENST00000324677 QSER1Q2KHR3 1735 aa27.76■■■□□ 2.03
SSH2-202ENST00000324677 RRS1Q15050 365 aaKnown RBP27.76■■■□□ 2.03
SSH2-202ENST00000324677 SGIP1Q9BQI5 828 aa27.76■■■□□ 2.03
SSH2-202ENST00000324677 MEGF6O75095 1541 aa27.76■■■□□ 2.03
SSH2-202ENST00000324677 ZNF827Q17R98 1081 aa27.75■■■□□ 2.03
SSH2-202ENST00000324677 ZCRB1Q8TBF4 217 aaKnown RBP27.74■■■□□ 2.03
SSH2-202ENST00000324677 LY75O60449 1722 aa27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms