RNA–Protein interactions for RNA: ENST00000323441.10

HIF1A-201, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,555 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-201ENST00000323441 TNRC18O15417 2968 aaPredicted RBP4.76□□□□□ -1.65
HIF1A-201ENST00000323441 SPATA31E1Q6ZUB1 1445 aa4.76□□□□□ -1.65
HIF1A-201ENST00000323441 USP19O94966 1318 aa4.76□□□□□ -1.65
HIF1A-201ENST00000323441 ATF5Q9Y2D1 282 aaPredicted RBP4.76□□□□□ -1.65
HIF1A-201ENST00000323441 VGFO15240 615 aaPredicted RBP4.76□□□□□ -1.65
HIF1A-201ENST00000323441 AKT1S1Q96B36 256 aa4.76□□□□□ -1.65
HIF1A-201ENST00000323441 CHGAP10645 457 aaKnown RBP4.75□□□□□ -1.65
HIF1A-201ENST00000323441 GOLGB1Q14789 3259 aaKnown RBP4.75□□□□□ -1.65
HIF1A-201ENST00000323441 PTF1AQ7RTS3 328 aa4.75□□□□□ -1.65
HIF1A-201ENST00000323441 TCP11L2Q8N4U5 519 aa4.75□□□□□ -1.65
HIF1A-201ENST00000323441 SBF1O95248 1867 aa4.75□□□□□ -1.65
HIF1A-201ENST00000323441 NLGN2Q8NFZ4 835 aa4.75□□□□□ -1.65
HIF1A-201ENST00000323441 EHMT2Q96KQ7 1210 aa4.75□□□□□ -1.65
HIF1A-201ENST00000323441 GPBP1L1Q9HC44 474 aaPredicted RBP4.75□□□□□ -1.65
HIF1A-201ENST00000323441 STK32BQ9NY57 414 aa4.75□□□□□ -1.65
HIF1A-201ENST00000323441 ACIN1Q9UKV3 1341 aaKnown RBP4.75□□□□□ -1.65
HIF1A-201ENST00000323441 POLR3AO14802 1390 aaPredicted RBP4.75□□□□□ -1.65
HIF1A-201ENST00000323441 HOXD11P31277 338 aaPredicted RBP4.74□□□□□ -1.65
HIF1A-201ENST00000323441 GPR162Q16538 588 aa4.74□□□□□ -1.65
HIF1A-201ENST00000323441 TXNRD1Q16881 649 aa4.74□□□□□ -1.65
HIF1A-201ENST00000323441 UBR3Q6ZT12 1888 aa4.74□□□□□ -1.65
HIF1A-201ENST00000323441 TOMM70O94826 608 aa4.74□□□□□ -1.65
HIF1A-201ENST00000323441 PPP4R3CPQ6ZMV5 832 aa4.74□□□□□ -1.65
HIF1A-201ENST00000323441 RBM46Q8TBY0 533 aaKnown RBP4.74□□□□□ -1.65
HIF1A-201ENST00000323441 ANKRD30BQ9BXX2 1392 aa4.74□□□□□ -1.65
HIF1A-201ENST00000323441 PDE3BQ13370 1112 aa4.73□□□□□ -1.65
HIF1A-201ENST00000323441 RNF216Q9NWF9 866 aaPredicted RBP4.73□□□□□ -1.65
HIF1A-201ENST00000323441 FSTL1Q12841 308 aa4.73□□□□□ -1.65
HIF1A-201ENST00000323441 EIF3AQ14152 1382 aaKnown RBP4.73□□□□□ -1.65
HIF1A-201ENST00000323441 ZNF827Q17R98 1081 aa4.73□□□□□ -1.65
HIF1A-201ENST00000323441 WAPLQ7Z5K2 1190 aa4.73□□□□□ -1.65
HIF1A-201ENST00000323441 FAM208AQ9UK61 1670 aaKnown RBP4.73□□□□□ -1.65
HIF1A-201ENST00000323441 WWC3Q9ULE0 1092 aa4.73□□□□□ -1.65
HIF1A-201ENST00000323441 PNPLA7Q6ZV29 1317 aa4.73□□□□□ -1.65
HIF1A-201ENST00000323441 DOT1LQ8TEK3 1739 aa4.72□□□□□ -1.65
HIF1A-201ENST00000323441 NUP155O75694 1391 aa4.72□□□□□ -1.65
HIF1A-201ENST00000323441 PRR36Q9H6K5 1346 aa4.72□□□□□ -1.65
HIF1A-201ENST00000323441 A0A0G2JS52 829 aa4.72□□□□□ -1.65
HIF1A-201ENST00000323441 MYT1Q01538 1121 aa4.72□□□□□ -1.65
HIF1A-201ENST00000323441 LARP1Q6PKG0 1096 aaKnown RBP4.72□□□□□ -1.65
HIF1A-201ENST00000323441 MARCH10Q8NA82 808 aaPredicted RBP4.72□□□□□ -1.65
HIF1A-201ENST00000323441 CAPN15O75808 1086 aa4.71□□□□□ -1.65
HIF1A-201ENST00000323441 ZNF831Q5JPB2 1677 aa4.71□□□□□ -1.65
HIF1A-201ENST00000323441 CD2APQ9Y5K6 639 aa4.71□□□□□ -1.66
HIF1A-201ENST00000323441 N4BP2Q86UW6 1770 aaPredicted RBP4.71□□□□□ -1.66
HIF1A-201ENST00000323441 DLEC1Q9Y238 1755 aa4.71□□□□□ -1.66
HIF1A-201ENST00000323441 PRDM10Q9NQV6 1147 aa4.71□□□□□ -1.66
HIF1A-201ENST00000323441 NFAT5O94916 1531 aa4.71□□□□□ -1.66
HIF1A-201ENST00000323441 MAP2P11137 1827 aaKnown RBP4.7□□□□□ -1.66
HIF1A-201ENST00000323441 HAP1P54257 671 aaPredicted RBP4.7□□□□□ -1.66
HIF1A-201ENST00000323441 CDCA7Q9BWT1 371 aaPredicted RBP4.7□□□□□ -1.66
HIF1A-201ENST00000323441 PRDM11Q9NQV5 511 aa4.7□□□□□ -1.66
HIF1A-201ENST00000323441 CHIC2Q9UKJ5 165 aa4.7□□□□□ -1.66
HIF1A-201ENST00000323441 ZNF326Q5BKZ1 582 aaKnown RBP4.7□□□□□ -1.66
HIF1A-201ENST00000323441 TIAM2Q8IVF5 1701 aa4.7□□□□□ -1.66
HIF1A-201ENST00000323441 GPRASP1Q5JY77 1395 aa4.7□□□□□ -1.66
HIF1A-201ENST00000323441 ADGRF5Q8IZF2 1346 aa4.7□□□□□ -1.66
HIF1A-201ENST00000323441 LRRC4BQ9NT99 713 aa4.7□□□□□ -1.66
HIF1A-201ENST00000323441 ADAMTS7Q9UKP4 1686 aa4.7□□□□□ -1.66
HIF1A-201ENST00000323441 NSD2O96028 1365 aa4.69□□□□□ -1.66
HIF1A-201ENST00000323441 KDM6AO15550 1401 aaPredicted RBP4.69□□□□□ -1.66
HIF1A-201ENST00000323441 HSPA1AP0DMV8 641 aaKnown RBP4.69□□□□□ -1.66
HIF1A-201ENST00000323441 HSPA1BP0DMV9 641 aaKnown RBP4.69□□□□□ -1.66
HIF1A-201ENST00000323441 ADAMTSL1Q8N6G6 1762 aa4.69□□□□□ -1.66
HIF1A-201ENST00000323441 C4BP0C0L5 1744 aa4.69□□□□□ -1.66
HIF1A-201ENST00000323441 DICER1Q9UPY3 1922 aaKnown RBP4.68□□□□□ -1.66
HIF1A-201ENST00000323441 PLEKHG2Q9H7P9 1386 aa4.68□□□□□ -1.66
HIF1A-201ENST00000323441 SLC27A3Q5K4L6 730 aa4.68□□□□□ -1.66
HIF1A-201ENST00000323441 C14orf93Q9H972 538 aaKnown RBP4.68□□□□□ -1.66
HIF1A-201ENST00000323441 LTBP1Q14766 1721 aa4.68□□□□□ -1.66
HIF1A-201ENST00000323441 PCNTO95613 3336 aa4.68□□□□□ -1.66
HIF1A-201ENST00000323441 POLD1P28340 1107 aa4.68□□□□□ -1.66
HIF1A-201ENST00000323441 LTN1O94822 1766 aa4.68□□□□□ -1.66
HIF1A-201ENST00000323441 USP6P35125 1406 aa4.67□□□□□ -1.66
HIF1A-201ENST00000323441 CHRNA2Q15822 529 aa4.67□□□□□ -1.66
HIF1A-201ENST00000323441 CPSF1Q10570 1443 aaKnown RBP4.67□□□□□ -1.66
HIF1A-201ENST00000323441 DDB1Q16531 1140 aa4.67□□□□□ -1.66
HIF1A-201ENST00000323441 WDR17Q8IZU2 1322 aa4.67□□□□□ -1.66
HIF1A-201ENST00000323441 PPIP5K1Q6PFW1 1433 aa4.67□□□□□ -1.66
HIF1A-201ENST00000323441 NUTM2FA1L443 756 aa4.66□□□□□ -1.66
HIF1A-201ENST00000323441 FAM161AQ3B820 660 aa4.66□□□□□ -1.66
HIF1A-201ENST00000323441 MON2Q7Z3U7 1717 aa4.66□□□□□ -1.66
HIF1A-201ENST00000323441 STRN4Q9NRL3 753 aa4.66□□□□□ -1.66
HIF1A-201ENST00000323441 CCDC7Q96M83 1385 aa4.66□□□□□ -1.66
HIF1A-201ENST00000323441 C4AP0C0L4 1744 aa4.66□□□□□ -1.66
HIF1A-201ENST00000323441 COL5A3P25940 1745 aaPredicted RBP4.65□□□□□ -1.66
HIF1A-201ENST00000323441 PMFBP1Q8TBY8 1022 aa4.65□□□□□ -1.66
HIF1A-201ENST00000323441 CARD10Q9BWT7 1032 aa4.65□□□□□ -1.66
HIF1A-201ENST00000323441 NRXN2Q9P2S2 1712 aa4.65□□□□□ -1.67
HIF1A-201ENST00000323441 ITGB4P16144 1822 aa4.65□□□□□ -1.67
HIF1A-201ENST00000323441 KCPQ6ZWJ8 1503 aa4.65□□□□□ -1.67
HIF1A-201ENST00000323441 PLEKHG3A1L390 1219 aa4.65□□□□□ -1.67
HIF1A-201ENST00000323441 HTRA3P83110 453 aa4.65□□□□□ -1.67
HIF1A-201ENST00000323441 WASLO00401 505 aaPredicted RBP4.64□□□□□ -1.67
HIF1A-201ENST00000323441 ZC3H4Q9UPT8 1303 aaKnown RBP4.64□□□□□ -1.67
HIF1A-201ENST00000323441 NMRK2Q9NPI5 230 aa4.64□□□□□ -1.67
HIF1A-201ENST00000323441 MLLT1Q03111 559 aaPredicted RBP4.63□□□□□ -1.67
HIF1A-201ENST00000323441 TMEM132EQ6IEE7 984 aa4.63□□□□□ -1.67
HIF1A-201ENST00000323441 IGSF1Q8N6C5 1336 aa4.63□□□□□ -1.67
HIF1A-201ENST00000323441 EVA1CP58658 441 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms