RNA–Protein interactions for RNA: ENST00000323224.7

TYMS-201, Transcript of thymidylate synthetase, humanhuman

TSL 1 (best) BASIC

Gene TYMS, Length 1,327 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TYMS-201ENST00000323224 WNK3Q9BYP7 1800 aa26.5■■□□□ 1.83
TYMS-201ENST00000323224 THRAP3Q9Y2W1 955 aaKnown RBP26.5■■□□□ 1.83
TYMS-201ENST00000323224 USP31Q70CQ4 1352 aa26.49■■□□□ 1.83
TYMS-201ENST00000323224 PDE3BQ13370 1112 aa26.49■■□□□ 1.83
TYMS-201ENST00000323224 FAM196AQ6ZSG2 479 aa26.49■■□□□ 1.83
TYMS-201ENST00000323224 TOM1L2Q6ZVM7 507 aa26.49■■□□□ 1.83
TYMS-201ENST00000323224 LRRC37A3O60309 1634 aa26.49■■□□□ 1.83
TYMS-201ENST00000323224 WDR17Q8IZU2 1322 aa26.47■■□□□ 1.83
TYMS-201ENST00000323224 HDGFL2Q7Z4V5 671 aaPredicted RBP26.47■■□□□ 1.83
TYMS-201ENST00000323224 EDC4Q6P2E9 1401 aaKnown RBP26.47■■□□□ 1.83
TYMS-201ENST00000323224 LTN1O94822 1766 aa26.47■■□□□ 1.83
TYMS-201ENST00000323224 PCGF6Q9BYE7 350 aa26.46■■□□□ 1.83
TYMS-201ENST00000323224 DISP2A7MBM2 1401 aa26.46■■□□□ 1.83
TYMS-201ENST00000323224 USP47Q96K76 1375 aa26.45■■□□□ 1.82
TYMS-201ENST00000323224 PUS7Q96PZ0 661 aaKnown RBP26.44■■□□□ 1.82
TYMS-201ENST00000323224 PEAK1Q9H792 1746 aa26.44■■□□□ 1.82
TYMS-201ENST00000323224 PSDA5PKW4 1024 aaPredicted RBP26.43■■□□□ 1.82
TYMS-201ENST00000323224 EZH2Q15910 746 aaKnown RBP26.43■■□□□ 1.82
TYMS-201ENST00000323224 TERF2IPQ9NYB0 399 aa26.43■■□□□ 1.82
TYMS-201ENST00000323224 OVOS2A0A0J9YW53 1432 aa26.41■■□□□ 1.82
TYMS-201ENST00000323224 OVOS2Q6IE36 1432 aa26.41■■□□□ 1.82
TYMS-201ENST00000323224 CSB-PGBD3P0DP91 1061 aa26.4■■□□□ 1.82
TYMS-201ENST00000323224 ABCC6O95255 1503 aa26.4■■□□□ 1.82
TYMS-201ENST00000323224 APBA3O96018 575 aa26.39■■□□□ 1.82
TYMS-201ENST00000323224 CAMKK2Q96RR4 588 aa26.39■■□□□ 1.82
TYMS-201ENST00000323224 SBF2Q86WG5 1849 aa26.39■■□□□ 1.82
TYMS-201ENST00000323224 DDB1Q16531 1140 aa26.38■■□□□ 1.81
TYMS-201ENST00000323224 CARD10Q9BWT7 1032 aa26.38■■□□□ 1.81
TYMS-201ENST00000323224 RREB1Q92766 1687 aa26.36■■□□□ 1.81
TYMS-201ENST00000323224 NINLQ9Y2I6 1382 aa26.36■■□□□ 1.81
TYMS-201ENST00000323224 OVOS2A0A0G2JMS6 1433 aa26.35■■□□□ 1.81
TYMS-201ENST00000323224 PTF1AQ7RTS3 328 aa26.34■■□□□ 1.81
TYMS-201ENST00000323224 MARCH10Q8NA82 808 aaPredicted RBP26.34■■□□□ 1.81
TYMS-201ENST00000323224 ERBB3P21860 1342 aa26.33■■□□□ 1.81
TYMS-201ENST00000323224 NUP188Q5SRE5 1749 aa26.33■■□□□ 1.81
TYMS-201ENST00000323224 FBLN1P23142 703 aa26.33■■□□□ 1.81
TYMS-201ENST00000323224 TMF1P82094 1093 aa26.33■■□□□ 1.81
TYMS-201ENST00000323224 R3HDM1Q15032 1099 aaKnown RBP26.33■■□□□ 1.81
TYMS-201ENST00000323224 ANKRD36BQ8N2N9 1353 aa26.32■■□□□ 1.8
TYMS-201ENST00000323224 NLRP2Q9NX02 1062 aa26.3■■□□□ 1.8
TYMS-201ENST00000323224 CCDC7Q96M83 1385 aa26.3■■□□□ 1.8
TYMS-201ENST00000323224 ANKRD24Q8TF21 1146 aa26.29■■□□□ 1.8
TYMS-201ENST00000323224 CDCA7Q9BWT1 371 aaPredicted RBP26.29■■□□□ 1.8
TYMS-201ENST00000323224 MYOM1P52179 1685 aa26.29■■□□□ 1.8
TYMS-201ENST00000323224 CLSPNQ9HAW4 1339 aa26.29■■□□□ 1.8
TYMS-201ENST00000323224 LRP5O75197 1615 aa26.28■■□□□ 1.8
TYMS-201ENST00000323224 SLC24A1O60721 1099 aa26.28■■□□□ 1.8
TYMS-201ENST00000323224 COG3Q96JB2 828 aa26.27■■□□□ 1.8
TYMS-201ENST00000323224 TIMELESSQ9UNS1 1208 aa26.27■■□□□ 1.8
TYMS-201ENST00000323224 PARD3Q8TEW0 1356 aa26.27■■□□□ 1.8
TYMS-201ENST00000323224 TNS2Q63HR2 1409 aa26.26■■□□□ 1.79
TYMS-201ENST00000323224 MAP3K19Q56UN5 1328 aa26.24■■□□□ 1.79
TYMS-201ENST00000323224 IP6K1Q92551 441 aa26.24■■□□□ 1.79
TYMS-201ENST00000323224 LTV1Q96GA3 475 aaPredicted RBP26.24■■□□□ 1.79
TYMS-201ENST00000323224 RGPD2P0DJD1 1756 aa26.24■■□□□ 1.79
TYMS-201ENST00000323224 EXOC5O00471 708 aa26.23■■□□□ 1.79
TYMS-201ENST00000323224 FYB1O15117 783 aa26.23■■□□□ 1.79
TYMS-201ENST00000323224 GGNBP2Q9H3C7 697 aa26.23■■□□□ 1.79
TYMS-201ENST00000323224 KIF20BQ96Q89 1820 aa26.23■■□□□ 1.79
TYMS-201ENST00000323224 BCL9O00512 1426 aa26.22■■□□□ 1.79
TYMS-201ENST00000323224 C11orf95C9JLR9 678 aaPredicted RBP26.21■■□□□ 1.79
TYMS-201ENST00000323224 BCL11BQ9C0K0 894 aaPredicted RBP26.21■■□□□ 1.79
TYMS-201ENST00000323224 RGPD3A6NKT7 1758 aaPredicted RBP26.21■■□□□ 1.79
TYMS-201ENST00000323224 RGPD4Q7Z3J3 1758 aa26.21■■□□□ 1.79
TYMS-201ENST00000323224 FAM208AQ9UK61 1670 aaKnown RBP26.19■■□□□ 1.78
TYMS-201ENST00000323224 IL2RBP14784 551 aa26.19■■□□□ 1.78
TYMS-201ENST00000323224 HOXC9P31274 260 aa26.19■■□□□ 1.78
TYMS-201ENST00000323224 RRS1Q15050 365 aaKnown RBP26.19■■□□□ 1.78
TYMS-201ENST00000323224 CARD14Q9BXL6 1004 aa26.19■■□□□ 1.78
TYMS-201ENST00000323224 CCER1Q8TC90 406 aaPredicted RBP26.18■■□□□ 1.78
TYMS-201ENST00000323224 KCNQ2O43526 872 aa26.17■■□□□ 1.78
TYMS-201ENST00000323224 AMPHP49418 695 aa26.16■■□□□ 1.78
TYMS-201ENST00000323224 CDCA8Q53HL2 280 aa26.16■■□□□ 1.78
TYMS-201ENST00000323224 NHSQ6T4R5 1651 aa26.16■■□□□ 1.78
TYMS-201ENST00000323224 PROM2Q8N271 834 aa26.15■■□□□ 1.78
TYMS-201ENST00000323224 PLSCR1O15162 318 aa26.14■■□□□ 1.78
TYMS-201ENST00000323224 ACSBG1Q96GR2 724 aa26.14■■□□□ 1.78
TYMS-201ENST00000323224 NSD3Q9BZ95 1437 aa26.14■■□□□ 1.77
TYMS-201ENST00000323224 ANO8Q9HCE9 1232 aaPredicted RBP26.14■■□□□ 1.77
TYMS-201ENST00000323224 KAT6BQ8WYB5 2073 aa26.13■■□□□ 1.77
TYMS-201ENST00000323224 NBPF14Q5TI25 921 aa26.12■■□□□ 1.77
TYMS-201ENST00000323224 RTL1A6NKG5 1358 aa26.1■■□□□ 1.77
TYMS-201ENST00000323224 SHANK3Q9BYB0 1731 aa26.1■■□□□ 1.77
TYMS-201ENST00000323224 BTAF1O14981 1849 aa26.09■■□□□ 1.77
TYMS-201ENST00000323224 POLR3GLQ9BT43 218 aa26.09■■□□□ 1.77
TYMS-201ENST00000323224 MEGF6O75095 1541 aa26.08■■□□□ 1.77
TYMS-201ENST00000323224 HSPA5P11021 654 aaKnown RBP26.08■■□□□ 1.77
TYMS-201ENST00000323224 USHBP1Q8N6Y0 703 aa26.08■■□□□ 1.77
TYMS-201ENST00000323224 NBPF6Q5VWK0 638 aa26.07■■□□□ 1.76
TYMS-201ENST00000323224 DDX54Q8TDD1 881 aaKnown RBP26.07■■□□□ 1.76
TYMS-201ENST00000323224 NBPF4Q96M43 638 aa26.07■■□□□ 1.76
TYMS-201ENST00000323224 TXNRD1Q16881 649 aa26.06■■□□□ 1.76
TYMS-201ENST00000323224 HSP90AB2PQ58FF8 381 aa26.06■■□□□ 1.76
TYMS-201ENST00000323224 PDGFDQ9GZP0 370 aaPredicted RBP26.05■■□□□ 1.76
TYMS-201ENST00000323224 EMILIN1Q9Y6C2 1016 aa26.04■■□□□ 1.76
TYMS-201ENST00000323224 CASZ1Q86V15 1759 aa26.04■■□□□ 1.76
TYMS-201ENST00000323224 EIF4G2P78344 907 aaKnown RBP eCLIP26.03■■□□□ 1.76
TYMS-201ENST00000323224 DOT1LQ8TEK3 1739 aa26.02■■□□□ 1.76
TYMS-201ENST00000323224 INSRP06213 1382 aa26.01■■□□□ 1.75
TYMS-201ENST00000323224 FLT4P35916 1363 aa26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms