RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 FAM208AQ9UK61 1670 aaKnown RBP17.62■□□□□ 0.41
TPM3-204ENST00000323144 TTC21AQ8NDW8 1320 aa17.62■□□□□ 0.41
TPM3-204ENST00000323144 A0A1W2PP64 1363 aa17.62■□□□□ 0.41
TPM3-204ENST00000323144 OVOS2A0A0G2JMS6 1433 aa17.62■□□□□ 0.41
TPM3-204ENST00000323144 OVOS2A0A0J9YW53 1432 aa17.62■□□□□ 0.41
TPM3-204ENST00000323144 OVOS2Q6IE36 1432 aa17.62■□□□□ 0.41
TPM3-204ENST00000323144 KIF20BQ96Q89 1820 aa17.61■□□□□ 0.41
TPM3-204ENST00000323144 TRIM37O94972 964 aa17.61■□□□□ 0.41
TPM3-204ENST00000323144 NHSQ6T4R5 1651 aa17.61■□□□□ 0.41
TPM3-204ENST00000323144 EDC4Q6P2E9 1401 aaKnown RBP17.59■□□□□ 0.41
TPM3-204ENST00000323144 WDR17Q8IZU2 1322 aa17.59■□□□□ 0.41
TPM3-204ENST00000323144 EZH2Q15910 746 aaKnown RBP17.59■□□□□ 0.41
TPM3-204ENST00000323144 AXIN2Q9Y2T1 843 aa17.59■□□□□ 0.41
TPM3-204ENST00000323144 RGPD2P0DJD1 1756 aa17.58■□□□□ 0.41
TPM3-204ENST00000323144 TNS2Q63HR2 1409 aa17.58■□□□□ 0.41
TPM3-204ENST00000323144 FAM196AQ6ZSG2 479 aa17.58■□□□□ 0.4
TPM3-204ENST00000323144 USP31Q70CQ4 1352 aa17.57■□□□□ 0.4
TPM3-204ENST00000323144 ARHGEF25Q86VW2 580 aa17.57■□□□□ 0.4
TPM3-204ENST00000323144 NME9Q86XW9 330 aa17.57■□□□□ 0.4
TPM3-204ENST00000323144 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.57■□□□□ 0.4
TPM3-204ENST00000323144 THRAP3Q9Y2W1 955 aaKnown RBP17.57■□□□□ 0.4
TPM3-204ENST00000323144 SHANK3Q9BYB0 1731 aa17.57■□□□□ 0.4
TPM3-204ENST00000323144 CASZ1Q86V15 1759 aa17.56■□□□□ 0.4
TPM3-204ENST00000323144 PDE3BQ13370 1112 aa17.56■□□□□ 0.4
TPM3-204ENST00000323144 PARD3Q8TEW0 1356 aa17.55■□□□□ 0.4
TPM3-204ENST00000323144 TOM1L2Q6ZVM7 507 aa17.55■□□□□ 0.4
TPM3-204ENST00000323144 ZNF692Q9BU19 519 aaPredicted RBP17.55■□□□□ 0.4
TPM3-204ENST00000323144 R3HDM1Q15032 1099 aaKnown RBP17.54■□□□□ 0.4
TPM3-204ENST00000323144 CAMKK2Q96RR4 588 aa17.54■□□□□ 0.4
TPM3-204ENST00000323144 APBA3O96018 575 aa17.53■□□□□ 0.4
TPM3-204ENST00000323144 KCNH5Q8NCM2 988 aa17.53■□□□□ 0.4
TPM3-204ENST00000323144 TMC1Q8TDI8 760 aa17.53■□□□□ 0.4
TPM3-204ENST00000323144 BTAF1O14981 1849 aa17.53■□□□□ 0.4
TPM3-204ENST00000323144 DOT1LQ8TEK3 1739 aa17.52■□□□□ 0.4
TPM3-204ENST00000323144 TRIM26Q12899 539 aaPredicted RBP17.52■□□□□ 0.4
TPM3-204ENST00000323144 TESK2Q96S53 571 aa17.52■□□□□ 0.4
TPM3-204ENST00000323144 SLC12A5Q9H2X9 1139 aa17.52■□□□□ 0.4
TPM3-204ENST00000323144 USP47Q96K76 1375 aa17.52■□□□□ 0.39
TPM3-204ENST00000323144 PAPPAQ13219 1627 aa17.5■□□□□ 0.39
TPM3-204ENST00000323144 CCDC7Q96M83 1385 aa17.5■□□□□ 0.39
TPM3-204ENST00000323144 ERBB3P21860 1342 aa17.49■□□□□ 0.39
TPM3-204ENST00000323144 CSB-PGBD3P0DP91 1061 aa17.49■□□□□ 0.39
TPM3-204ENST00000323144 DDB1Q16531 1140 aa17.49■□□□□ 0.39
TPM3-204ENST00000323144 PTF1AQ7RTS3 328 aa17.49■□□□□ 0.39
TPM3-204ENST00000323144 HDGFL2Q7Z4V5 671 aaPredicted RBP17.49■□□□□ 0.39
TPM3-204ENST00000323144 NINLQ9Y2I6 1382 aa17.49■□□□□ 0.39
TPM3-204ENST00000323144 ST20-MTHFSA0A0A6YYL1 179 aa17.48■□□□□ 0.39
TPM3-204ENST00000323144 BCL9O00512 1426 aa17.47■□□□□ 0.39
TPM3-204ENST00000323144 ANKRD26Q9UPS8 1709 aa17.47■□□□□ 0.39
TPM3-204ENST00000323144 MARCH10Q8NA82 808 aaPredicted RBP17.47■□□□□ 0.39
TPM3-204ENST00000323144 CARD10Q9BWT7 1032 aa17.47■□□□□ 0.39
TPM3-204ENST00000323144 ANKRD36BQ8N2N9 1353 aa17.46■□□□□ 0.39
TPM3-204ENST00000323144 TUBGCP6Q96RT7 1819 aa17.45■□□□□ 0.38
TPM3-204ENST00000323144 ANO8Q9HCE9 1232 aaPredicted RBP17.44■□□□□ 0.38
TPM3-204ENST00000323144 TERF2IPQ9NYB0 399 aa17.44■□□□□ 0.38
TPM3-204ENST00000323144 ANKRD24Q8TF21 1146 aa17.42■□□□□ 0.38
TPM3-204ENST00000323144 MEGF6O75095 1541 aa17.42■□□□□ 0.38
TPM3-204ENST00000323144 PUS7Q96PZ0 661 aaKnown RBP17.41■□□□□ 0.38
TPM3-204ENST00000323144 CDCA7Q9BWT1 371 aaPredicted RBP17.41■□□□□ 0.38
TPM3-204ENST00000323144 NLRP2Q9NX02 1062 aa17.4■□□□□ 0.38
TPM3-204ENST00000323144 LY75O60449 1722 aa17.39■□□□□ 0.37
TPM3-204ENST00000323144 TOGARAM1Q9Y4F4 1720 aa17.39■□□□□ 0.37
TPM3-204ENST00000323144 MAP3K19Q56UN5 1328 aa17.39■□□□□ 0.37
TPM3-204ENST00000323144 QSER1Q2KHR3 1735 aa17.38■□□□□ 0.37
TPM3-204ENST00000323144 C11orf95C9JLR9 678 aaPredicted RBP17.38■□□□□ 0.37
TPM3-204ENST00000323144 BCL11BQ9C0K0 894 aaPredicted RBP17.38■□□□□ 0.37
TPM3-204ENST00000323144 RTL1A6NKG5 1358 aa17.38■□□□□ 0.37
TPM3-204ENST00000323144 FBLN1P23142 703 aa17.37■□□□□ 0.37
TPM3-204ENST00000323144 PKD1L3Q7Z443 1732 aa17.37■□□□□ 0.37
TPM3-204ENST00000323144 IL2RBP14784 551 aa17.36■□□□□ 0.37
TPM3-204ENST00000323144 LTV1Q96GA3 475 aaPredicted RBP17.36■□□□□ 0.37
TPM3-204ENST00000323144 NSD3Q9BZ95 1437 aa17.36■□□□□ 0.37
TPM3-204ENST00000323144 PLSCR1O15162 318 aa17.35■□□□□ 0.37
TPM3-204ENST00000323144 KCNQ2O43526 872 aa17.35■□□□□ 0.37
TPM3-204ENST00000323144 ACSBG1Q96GR2 724 aa17.35■□□□□ 0.37
TPM3-204ENST00000323144 COG3Q96JB2 828 aa17.35■□□□□ 0.37
TPM3-204ENST00000323144 EXOC5O00471 708 aa17.34■□□□□ 0.37
TPM3-204ENST00000323144 HOXC9P31274 260 aa17.34■□□□□ 0.37
TPM3-204ENST00000323144 TMF1P82094 1093 aa17.34■□□□□ 0.37
TPM3-204ENST00000323144 NBPF14Q5TI25 921 aa17.34■□□□□ 0.37
TPM3-204ENST00000323144 IP6K1Q92551 441 aa17.34■□□□□ 0.37
TPM3-204ENST00000323144 PROM2Q8N271 834 aa17.33■□□□□ 0.36
TPM3-204ENST00000323144 PDGFDQ9GZP0 370 aaPredicted RBP17.33■□□□□ 0.36
TPM3-204ENST00000323144 GGNBP2Q9H3C7 697 aa17.33■□□□□ 0.36
TPM3-204ENST00000323144 RRS1Q15050 365 aaKnown RBP17.32■□□□□ 0.36
TPM3-204ENST00000323144 C5P01031 1676 aa17.31■□□□□ 0.36
TPM3-204ENST00000323144 KAT6BQ8WYB5 2073 aa17.31■□□□□ 0.36
TPM3-204ENST00000323144 MAP2P11137 1827 aaKnown RBP17.31■□□□□ 0.36
TPM3-204ENST00000323144 NSD2O96028 1365 aa17.3■□□□□ 0.36
TPM3-204ENST00000323144 TXNRD1Q16881 649 aa17.3■□□□□ 0.36
TPM3-204ENST00000323144 COL24A1Q17RW2 1714 aa17.3■□□□□ 0.36
TPM3-204ENST00000323144 SMG6Q86US8 1419 aaKnown RBP17.3■□□□□ 0.36
TPM3-204ENST00000323144 ITGB4P16144 1822 aa17.29■□□□□ 0.36
TPM3-204ENST00000323144 FYB1O15117 783 aa17.29■□□□□ 0.36
TPM3-204ENST00000323144 AMPHP49418 695 aa17.28■□□□□ 0.36
TPM3-204ENST00000323144 USHBP1Q8N6Y0 703 aa17.28■□□□□ 0.36
TPM3-204ENST00000323144 PCGF6Q9BYE7 350 aa17.28■□□□□ 0.36
TPM3-204ENST00000323144 TAF1LQ8IZX4 1826 aa17.27■□□□□ 0.36
TPM3-204ENST00000323144 FLT4P35916 1363 aa17.27■□□□□ 0.35
TPM3-204ENST00000323144 CLSPNQ9HAW4 1339 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms