RNA–Protein interactions for RNA: ENST00000318023.11

CAPN3-201, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 3,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-201ENST00000318023 PRKRIP1Q9H875 184 aaPredicted RBP12.14□□□□□ -0.47
CAPN3-201ENST00000318023 TULP4Q9NRJ4 1543 aa12.13□□□□□ -0.47
CAPN3-201ENST00000318023 PLEKHG3A1L390 1219 aa12.13□□□□□ -0.47
CAPN3-201ENST00000318023 EVA1CP58658 441 aa12.13□□□□□ -0.47
CAPN3-201ENST00000318023 BCL11BQ9C0K0 894 aaPredicted RBP12.12□□□□□ -0.47
CAPN3-201ENST00000318023 RNF123Q5XPI4 1314 aa12.12□□□□□ -0.47
CAPN3-201ENST00000318023 PXDNQ92626 1479 aa12.12□□□□□ -0.47
CAPN3-201ENST00000318023 RXRBP28702 533 aa12.12□□□□□ -0.47
CAPN3-201ENST00000318023 KIAA0232Q92628 1395 aa12.12□□□□□ -0.47
CAPN3-201ENST00000318023 TNS3Q68CZ2 1445 aa12.12□□□□□ -0.47
CAPN3-201ENST00000318023 GCP02774 474 aa12.12□□□□□ -0.47
CAPN3-201ENST00000318023 TTC21BQ7Z4L5 1316 aa12.11□□□□□ -0.47
CAPN3-201ENST00000318023 NLRP13Q86W25 1043 aa12.11□□□□□ -0.47
CAPN3-201ENST00000318023 CSB-PGBD3P0DP91 1061 aa12.11□□□□□ -0.47
CAPN3-201ENST00000318023 TERF2IPQ9NYB0 399 aa12.11□□□□□ -0.47
CAPN3-201ENST00000318023 ANKARQ7Z5J8 1434 aa12.1□□□□□ -0.47
CAPN3-201ENST00000318023 FAM98CQ17RN3 349 aaKnown RBP12.1□□□□□ -0.47
CAPN3-201ENST00000318023 ZNF772Q68DY9 489 aaPredicted RBP12.1□□□□□ -0.47
CAPN3-201ENST00000318023 FMN2Q9NZ56 1722 aa12.1□□□□□ -0.47
CAPN3-201ENST00000318023 USP32Q8NFA0 1604 aa12.1□□□□□ -0.47
CAPN3-201ENST00000318023 QRICH2Q9H0J4 1663 aa12.1□□□□□ -0.47
CAPN3-201ENST00000318023 KNDC1Q76NI1 1749 aa12.1□□□□□ -0.47
CAPN3-201ENST00000318023 PRDM4Q9UKN5 801 aa12.1□□□□□ -0.47
CAPN3-201ENST00000318023 AHDC1Q5TGY3 1603 aaPredicted RBP12.09□□□□□ -0.47
CAPN3-201ENST00000318023 ATAD2Q6PL18 1390 aa12.09□□□□□ -0.47
CAPN3-201ENST00000318023 RRS1Q15050 365 aaKnown RBP12.09□□□□□ -0.47
CAPN3-201ENST00000318023 A0A1W2PP64 1363 aa12.09□□□□□ -0.47
CAPN3-201ENST00000318023 MS4A1P11836 297 aa12.08□□□□□ -0.48
CAPN3-201ENST00000318023 ARHGEF10O15013 1369 aa12.08□□□□□ -0.48
CAPN3-201ENST00000318023 PANK3Q9H999 370 aa12.08□□□□□ -0.48
CAPN3-201ENST00000318023 CLCN1P35523 988 aa12.07□□□□□ -0.48
CAPN3-201ENST00000318023 LARP1Q6PKG0 1096 aaKnown RBP12.07□□□□□ -0.48
CAPN3-201ENST00000318023 ZNF692Q9BU19 519 aaPredicted RBP12.07□□□□□ -0.48
CAPN3-201ENST00000318023 PANK2Q9BZ23 570 aa12.07□□□□□ -0.48
CAPN3-201ENST00000318023 CARD14Q9BXL6 1004 aa12.06□□□□□ -0.48
CAPN3-201ENST00000318023 TRPC5Q9UL62 973 aaPredicted RBP12.06□□□□□ -0.48
CAPN3-201ENST00000318023 USP6P35125 1406 aa12.06□□□□□ -0.48
CAPN3-201ENST00000318023 UNC5CLQ8IV45 518 aa12.06□□□□□ -0.48
CAPN3-201ENST00000318023 AXIN2Q9Y2T1 843 aa12.06□□□□□ -0.48
CAPN3-201ENST00000318023 SBNO1A3KN83 1393 aa12.05□□□□□ -0.48
CAPN3-201ENST00000318023 CC2D1BQ5T0F9 858 aaKnown RBP12.05□□□□□ -0.48
CAPN3-201ENST00000318023 TOM1L2Q6ZVM7 507 aa12.05□□□□□ -0.48
CAPN3-201ENST00000318023 POLR3AO14802 1390 aaPredicted RBP12.05□□□□□ -0.48
CAPN3-201ENST00000318023 KIAA1210Q9ULL0 1709 aa12.04□□□□□ -0.48
CAPN3-201ENST00000318023 PDIA4P13667 645 aaKnown RBP12.04□□□□□ -0.48
CAPN3-201ENST00000318023 CDCA8Q53HL2 280 aa12.04□□□□□ -0.48
CAPN3-201ENST00000318023 COG3Q96JB2 828 aa12.04□□□□□ -0.48
CAPN3-201ENST00000318023 GJD4Q96KN9 370 aaPredicted RBP12.04□□□□□ -0.48
CAPN3-201ENST00000318023 NHSL1Q5SYE7 1610 aa12.04□□□□□ -0.48
CAPN3-201ENST00000318023 RBM6P78332 1123 aaKnown RBP12.04□□□□□ -0.48
CAPN3-201ENST00000318023 NLRP2Q9NX02 1062 aa12.04□□□□□ -0.48
CAPN3-201ENST00000318023 AMPHP49418 695 aa12.03□□□□□ -0.48
CAPN3-201ENST00000318023 L1TD1Q5T7N2 865 aaKnown RBP12.03□□□□□ -0.48
CAPN3-201ENST00000318023 FNBP4Q8N3X1 1017 aaPredicted RBP12.03□□□□□ -0.48
CAPN3-201ENST00000318023 RRP1P56182 461 aaKnown RBP12.03□□□□□ -0.48
CAPN3-201ENST00000318023 CALD1Q05682 793 aaKnown RBP12.03□□□□□ -0.48
CAPN3-201ENST00000318023 KIF7Q2M1P5 1343 aa12.03□□□□□ -0.48
CAPN3-201ENST00000318023 FYB1O15117 783 aa12.02□□□□□ -0.48
CAPN3-201ENST00000318023 USHBP1Q8N6Y0 703 aa12.02□□□□□ -0.48
CAPN3-201ENST00000318023 ADGRB2O60241 1585 aa12.02□□□□□ -0.48
CAPN3-201ENST00000318023 XRCC6P12956 609 aaKnown RBP eCLIP12.02□□□□□ -0.49
CAPN3-201ENST00000318023 SEPT12Q8IYM1 358 aa12.02□□□□□ -0.49
CAPN3-201ENST00000318023 SBNO2Q9Y2G9 1366 aa12.01□□□□□ -0.49
CAPN3-201ENST00000318023 PDCL3Q9H2J4 239 aa12.01□□□□□ -0.49
CAPN3-201ENST00000318023 NSD3Q9BZ95 1437 aa12.01□□□□□ -0.49
CAPN3-201ENST00000318023 ARID3AQ99856 593 aa12.01□□□□□ -0.49
CAPN3-201ENST00000318023 BCL9LQ86UU0 1499 aa12□□□□□ -0.49
CAPN3-201ENST00000318023 GZF1Q9H116 711 aaPredicted RBP12□□□□□ -0.49
CAPN3-201ENST00000318023 SOCS7O14512 581 aa12□□□□□ -0.49
CAPN3-201ENST00000318023 EMILIN1Q9Y6C2 1016 aa12□□□□□ -0.49
CAPN3-201ENST00000318023 SLKQ9H2G2 1235 aaPredicted RBP11.99□□□□□ -0.49
CAPN3-201ENST00000318023 KNSTRNQ9Y448 316 aa11.99□□□□□ -0.49
CAPN3-201ENST00000318023 ZHX1Q9UKY1 873 aaPredicted RBP11.98□□□□□ -0.49
CAPN3-201ENST00000318023 KIF1AQ12756 1690 aa11.98□□□□□ -0.49
CAPN3-201ENST00000318023 CD163L1Q9NR16 1453 aa11.98□□□□□ -0.49
CAPN3-201ENST00000318023 HSP90AB2PQ58FF8 381 aa11.98□□□□□ -0.49
CAPN3-201ENST00000318023 CPSF1Q10570 1443 aaKnown RBP11.98□□□□□ -0.49
CAPN3-201ENST00000318023 ERBB4Q15303 1308 aa11.98□□□□□ -0.49
CAPN3-201ENST00000318023 PLIN1O60240 522 aa11.98□□□□□ -0.49
CAPN3-201ENST00000318023 MAP3K19Q56UN5 1328 aa11.97□□□□□ -0.49
CAPN3-201ENST00000318023 ARHGEF25Q86VW2 580 aa11.97□□□□□ -0.49
CAPN3-201ENST00000318023 KCNH5Q8NCM2 988 aa11.97□□□□□ -0.49
CAPN3-201ENST00000318023 TTC21AQ8NDW8 1320 aa11.97□□□□□ -0.49
CAPN3-201ENST00000318023 BBXQ8WY36 941 aaPredicted RBP11.97□□□□□ -0.49
CAPN3-201ENST00000318023 ANKRD36BQ8N2N9 1353 aa11.96□□□□□ -0.49
CAPN3-201ENST00000318023 GOLGA6L3A6NEY3 463 aa11.96□□□□□ -0.49
CAPN3-201ENST00000318023 MORC1Q86VD1 984 aa11.96□□□□□ -0.5
CAPN3-201ENST00000318023 ANKRD24Q8TF21 1146 aa11.96□□□□□ -0.5
CAPN3-201ENST00000318023 SHPRHQ149N8 1683 aa11.96□□□□□ -0.5
CAPN3-201ENST00000318023 VPS72Q15906 364 aa11.95□□□□□ -0.5
CAPN3-201ENST00000318023 PDE3BQ13370 1112 aa11.95□□□□□ -0.5
CAPN3-201ENST00000318023 DEFB132Q7Z7B7 95 aa11.95□□□□□ -0.5
CAPN3-201ENST00000318023 DDX54Q8TDD1 881 aaKnown RBP11.95□□□□□ -0.5
CAPN3-201ENST00000318023 RCAN3Q9UKA8 241 aa11.95□□□□□ -0.5
CAPN3-201ENST00000318023 CCDC7Q96M83 1385 aa11.95□□□□□ -0.5
CAPN3-201ENST00000318023 USP19O94966 1318 aa11.94□□□□□ -0.5
CAPN3-201ENST00000318023 CGNL1Q0VF96 1302 aa11.94□□□□□ -0.5
CAPN3-201ENST00000318023 RGS12O14924 1447 aa11.94□□□□□ -0.5
CAPN3-201ENST00000318023 EDC4Q6P2E9 1401 aaKnown RBP11.94□□□□□ -0.5
CAPN3-201ENST00000318023 ESPNB1AK53 854 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms