RNA–Protein interactions for RNA: ENST00000317459.10

TRPT1-201, Transcript of tRNA phosphotransferase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRPT1, Length 962 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-201ENST00000317459 AXIN2Q9Y2T1 843 aa28.37■■■□□ 2.13
TRPT1-201ENST00000317459 COL18A1P39060 1754 aa28.37■■■□□ 2.13
TRPT1-201ENST00000317459 NSD3Q9BZ95 1437 aa28.35■■■□□ 2.13
TRPT1-201ENST00000317459 FYB1O15117 783 aa28.35■■■□□ 2.13
TRPT1-201ENST00000317459 CARD14Q9BXL6 1004 aa28.35■■■□□ 2.13
TRPT1-201ENST00000317459 GGNBP2Q9H3C7 697 aa28.35■■■□□ 2.13
TRPT1-201ENST00000317459 TCP11L2Q8N4U5 519 aa28.33■■■□□ 2.13
TRPT1-201ENST00000317459 CRB1P82279 1406 aa28.33■■■□□ 2.13
TRPT1-201ENST00000317459 ABCC6O95255 1503 aa28.33■■■□□ 2.13
TRPT1-201ENST00000317459 C11orf95C9JLR9 678 aaPredicted RBP28.32■■■□□ 2.12
TRPT1-201ENST00000317459 CSB-PGBD3P0DP91 1061 aa28.32■■■□□ 2.12
TRPT1-201ENST00000317459 TOM1L2Q6ZVM7 507 aa28.32■■■□□ 2.12
TRPT1-201ENST00000317459 KRT27Q7Z3Y8 459 aa28.32■■■□□ 2.12
TRPT1-201ENST00000317459 BRWD3Q6RI45 1802 aa28.32■■■□□ 2.12
TRPT1-201ENST00000317459 WDR17Q8IZU2 1322 aa28.31■■■□□ 2.12
TRPT1-201ENST00000317459 BARGINQ6ZT62 677 aa28.3■■■□□ 2.12
TRPT1-201ENST00000317459 THRAP3Q9Y2W1 955 aaKnown RBP28.3■■■□□ 2.12
TRPT1-201ENST00000317459 KIF20BQ96Q89 1820 aa28.29■■■□□ 2.12
TRPT1-201ENST00000317459 LTN1O94822 1766 aa28.29■■■□□ 2.12
TRPT1-201ENST00000317459 THSD7AQ9UPZ6 1657 aa28.29■■■□□ 2.12
TRPT1-201ENST00000317459 RGPD5Q99666 1765 aa28.27■■■□□ 2.12
TRPT1-201ENST00000317459 CGNL1Q0VF96 1302 aa28.27■■■□□ 2.12
TRPT1-201ENST00000317459 PANK3Q9H999 370 aa28.27■■■□□ 2.12
TRPT1-201ENST00000317459 KIF7Q2M1P5 1343 aa28.25■■■□□ 2.11
TRPT1-201ENST00000317459 FBLN1P23142 703 aa28.24■■■□□ 2.11
TRPT1-201ENST00000317459 MAP3K19Q56UN5 1328 aa28.23■■■□□ 2.11
TRPT1-201ENST00000317459 AMPHP49418 695 aa28.23■■■□□ 2.11
TRPT1-201ENST00000317459 IP6K1Q92551 441 aa28.23■■■□□ 2.11
TRPT1-201ENST00000317459 ERBB3P21860 1342 aa28.22■■■□□ 2.11
TRPT1-201ENST00000317459 BLMP54132 1417 aaPredicted RBP28.22■■■□□ 2.11
TRPT1-201ENST00000317459 CARD10Q9BWT7 1032 aa28.22■■■□□ 2.11
TRPT1-201ENST00000317459 ANKRD24Q8TF21 1146 aa28.21■■■□□ 2.11
TRPT1-201ENST00000317459 RRS1Q15050 365 aaKnown RBP28.2■■■□□ 2.1
TRPT1-201ENST00000317459 PDE3BQ13370 1112 aa28.19■■■□□ 2.1
TRPT1-201ENST00000317459 CCDC125Q86Z20 511 aa28.19■■■□□ 2.1
TRPT1-201ENST00000317459 NLRP2Q9NX02 1062 aa28.19■■■□□ 2.1
TRPT1-201ENST00000317459 HOXC9P31274 260 aa28.18■■■□□ 2.1
TRPT1-201ENST00000317459 CCDC7Q96M83 1385 aa28.18■■■□□ 2.1
TRPT1-201ENST00000317459 FAM182BQ5T319 152 aa28.17■■■□□ 2.1
TRPT1-201ENST00000317459 LTV1Q96GA3 475 aaPredicted RBP28.17■■■□□ 2.1
TRPT1-201ENST00000317459 RTL1A6NKG5 1358 aa28.16■■■□□ 2.1
TRPT1-201ENST00000317459 CDCA7Q9BWT1 371 aaPredicted RBP28.15■■■□□ 2.1
TRPT1-201ENST00000317459 PARP4Q9UKK3 1724 aaKnown RBP28.14■■■□□ 2.1
TRPT1-201ENST00000317459 EP400Q96L91 3159 aa28.13■■■□□ 2.09
TRPT1-201ENST00000317459 SF3B2Q13435 895 aaKnown RBP28.13■■■□□ 2.09
TRPT1-201ENST00000317459 KNSTRNQ9Y448 316 aa28.13■■■□□ 2.09
TRPT1-201ENST00000317459 DDB1Q16531 1140 aa28.12■■■□□ 2.09
TRPT1-201ENST00000317459 WNK3Q9BYP7 1800 aa28.11■■■□□ 2.09
TRPT1-201ENST00000317459 NSD2O96028 1365 aa28.11■■■□□ 2.09
TRPT1-201ENST00000317459 FAM196AQ6ZSG2 479 aa28.1■■■□□ 2.09
TRPT1-201ENST00000317459 WASHC2AQ641Q2 1341 aa28.1■■■□□ 2.09
TRPT1-201ENST00000317459 KIF24Q5T7B8 1368 aa28.1■■■□□ 2.09
TRPT1-201ENST00000317459 FLT4P35916 1363 aa28.09■■■□□ 2.09
TRPT1-201ENST00000317459 DISP2A7MBM2 1401 aa28.09■■■□□ 2.09
TRPT1-201ENST00000317459 LRRC37A3O60309 1634 aa28.08■■■□□ 2.09
TRPT1-201ENST00000317459 FAM208AQ9UK61 1670 aaKnown RBP28.08■■■□□ 2.09
TRPT1-201ENST00000317459 TNNT2P45379 298 aaPredicted RBP28.08■■■□□ 2.09
TRPT1-201ENST00000317459 EMILIN1Q9Y6C2 1016 aa28.08■■■□□ 2.09
TRPT1-201ENST00000317459 ANKRD26Q9UPS8 1709 aa28.08■■■□□ 2.09
TRPT1-201ENST00000317459 SMG6Q86US8 1419 aaKnown RBP28.08■■■□□ 2.09
TRPT1-201ENST00000317459 PPM1GO15355 546 aaPredicted RBP28.07■■■□□ 2.08
TRPT1-201ENST00000317459 HSP90AB2PQ58FF8 381 aa28.06■■■□□ 2.08
TRPT1-201ENST00000317459 INSRP06213 1382 aa28.05■■■□□ 2.08
TRPT1-201ENST00000317459 IL2RBP14784 551 aa28.05■■■□□ 2.08
TRPT1-201ENST00000317459 PEAK1Q9H792 1746 aa28.05■■■□□ 2.08
TRPT1-201ENST00000317459 EXOC5O00471 708 aa28.04■■■□□ 2.08
TRPT1-201ENST00000317459 MORC1Q86VD1 984 aa28.04■■■□□ 2.08
TRPT1-201ENST00000317459 POLKQ9UBT6 870 aa28.02■■■□□ 2.08
TRPT1-201ENST00000317459 OVOS2A0A0G2JMS6 1433 aa28.01■■■□□ 2.08
TRPT1-201ENST00000317459 TRIM37O94972 964 aa28.01■■■□□ 2.07
TRPT1-201ENST00000317459 TNS2Q63HR2 1409 aa28.01■■■□□ 2.07
TRPT1-201ENST00000317459 BAG6P46379 1132 aa28■■■□□ 2.07
TRPT1-201ENST00000317459 AMER1Q5JTC6 1135 aaPredicted RBP28■■■□□ 2.07
TRPT1-201ENST00000317459 DEFB132Q7Z7B7 95 aa28■■■□□ 2.07
TRPT1-201ENST00000317459 RGPD1P0DJD0 1748 aa28■■■□□ 2.07
TRPT1-201ENST00000317459 MARCH10Q8NA82 808 aaPredicted RBP27.99■■■□□ 2.07
TRPT1-201ENST00000317459 MAP2P11137 1827 aaKnown RBP27.99■■■□□ 2.07
TRPT1-201ENST00000317459 NBPF6Q5VWK0 638 aa27.98■■■□□ 2.07
TRPT1-201ENST00000317459 NBPF4Q96M43 638 aa27.98■■■□□ 2.07
TRPT1-201ENST00000317459 PER1O15534 1290 aaPredicted RBP27.97■■■□□ 2.07
TRPT1-201ENST00000317459 RGPD2P0DJD1 1756 aa27.96■■■□□ 2.07
TRPT1-201ENST00000317459 USHBP1Q8N6Y0 703 aa27.96■■■□□ 2.07
TRPT1-201ENST00000317459 CC2D1BQ5T0F9 858 aaKnown RBP27.93■■■□□ 2.06
TRPT1-201ENST00000317459 TNS1Q9HBL0 1735 aaKnown RBP27.92■■■□□ 2.06
TRPT1-201ENST00000317459 APBA3O96018 575 aa27.91■■■□□ 2.06
TRPT1-201ENST00000317459 RAPGEF4Q8WZA2 1011 aa27.91■■■□□ 2.06
TRPT1-201ENST00000317459 EN1Q05925 392 aaPredicted RBP27.9■■■□□ 2.06
TRPT1-201ENST00000317459 BCL9O00512 1426 aa27.9■■■□□ 2.06
TRPT1-201ENST00000317459 MEGF6O75095 1541 aa27.89■■■□□ 2.06
TRPT1-201ENST00000317459 CNGB1Q14028 1251 aaPredicted RBP27.89■■■□□ 2.06
TRPT1-201ENST00000317459 DDX54Q8TDD1 881 aaKnown RBP27.88■■■□□ 2.05
TRPT1-201ENST00000317459 TATP17735 454 aaPredicted RBP27.87■■■□□ 2.05
TRPT1-201ENST00000317459 EIF4A2Q14240 407 aaKnown RBP27.87■■■□□ 2.05
TRPT1-201ENST00000317459 ZCRB1Q8TBF4 217 aaKnown RBP27.87■■■□□ 2.05
TRPT1-201ENST00000317459 NPC1L1Q9UHC9 1359 aa27.86■■■□□ 2.05
TRPT1-201ENST00000317459 ZEB1P37275 1124 aaPredicted RBP27.86■■■□□ 2.05
TRPT1-201ENST00000317459 EYA1Q99502 592 aa27.85■■■□□ 2.05
TRPT1-201ENST00000317459 BCL11BQ9C0K0 894 aaPredicted RBP27.85■■■□□ 2.05
TRPT1-201ENST00000317459 SBF2Q86WG5 1849 aa27.83■■■□□ 2.05
TRPT1-201ENST00000317459 EZH2Q15910 746 aaKnown RBP27.83■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms