RNA–Protein interactions for RNA: ENST00000316398.4

CCDC89-201, Transcript of coiled-coil domain containing 89, humanhuman

APPRIS P1 BASIC

Gene CCDC89, Length 1,412 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89-201ENST00000316398 PTF1AQ7RTS3 328 aa16.48■□□□□ 0.23
CCDC89-201ENST00000316398 NUP188Q5SRE5 1749 aa16.48■□□□□ 0.23
CCDC89-201ENST00000316398 PEAK1Q9H792 1746 aa16.47■□□□□ 0.23
CCDC89-201ENST00000316398 ZBTB7CA1YPR0 619 aa16.47■□□□□ 0.23
CCDC89-201ENST00000316398 EXOC5O00471 708 aa16.47■□□□□ 0.23
CCDC89-201ENST00000316398 YY1P25490 414 aa16.47■□□□□ 0.23
CCDC89-201ENST00000316398 PPP1R1BQ9UD71 204 aaPredicted RBP16.47■□□□□ 0.23
CCDC89-201ENST00000316398 COL18A1P39060 1754 aa16.47■□□□□ 0.23
CCDC89-201ENST00000316398 DCAF8L1A6NGE4 600 aa16.46■□□□□ 0.23
CCDC89-201ENST00000316398 TTC21AQ8NDW8 1320 aa16.46■□□□□ 0.23
CCDC89-201ENST00000316398 NINLQ9Y2I6 1382 aa16.45■□□□□ 0.22
CCDC89-201ENST00000316398 CPSF1Q10570 1443 aaKnown RBP16.44■□□□□ 0.22
CCDC89-201ENST00000316398 SBF2Q86WG5 1849 aa16.43■□□□□ 0.22
CCDC89-201ENST00000316398 TXNRD1Q16881 649 aa16.43■□□□□ 0.22
CCDC89-201ENST00000316398 ANO8Q9HCE9 1232 aaPredicted RBP16.43■□□□□ 0.22
CCDC89-201ENST00000316398 RGPD3A6NKT7 1758 aaPredicted RBP16.42■□□□□ 0.22
CCDC89-201ENST00000316398 RGPD4Q7Z3J3 1758 aa16.42■□□□□ 0.22
CCDC89-201ENST00000316398 CSB-PGBD3P0DP91 1061 aa16.41■□□□□ 0.22
CCDC89-201ENST00000316398 PTGER2P43116 358 aa16.41■□□□□ 0.22
CCDC89-201ENST00000316398 SLC15A2Q16348 729 aa16.41■□□□□ 0.22
CCDC89-201ENST00000316398 SIN3AQ96ST3 1273 aa16.41■□□□□ 0.22
CCDC89-201ENST00000316398 PDGFDQ9GZP0 370 aaPredicted RBP16.41■□□□□ 0.22
CCDC89-201ENST00000316398 QRICH2Q9H0J4 1663 aa16.41■□□□□ 0.22
CCDC89-201ENST00000316398 CCDC7Q96M83 1385 aa16.4■□□□□ 0.22
CCDC89-201ENST00000316398 PIK3C2AO00443 1686 aa16.39■□□□□ 0.21
CCDC89-201ENST00000316398 USP31Q70CQ4 1352 aa16.39■□□□□ 0.21
CCDC89-201ENST00000316398 KTN1Q86UP2 1357 aaKnown RBP16.39■□□□□ 0.21
CCDC89-201ENST00000316398 LRRC37A3O60309 1634 aa16.39■□□□□ 0.21
CCDC89-201ENST00000316398 STK32BQ9NY57 414 aa16.38■□□□□ 0.21
CCDC89-201ENST00000316398 ROCK2O75116 1388 aaKnown RBP16.37■□□□□ 0.21
CCDC89-201ENST00000316398 SOX12O15370 315 aa16.36■□□□□ 0.21
CCDC89-201ENST00000316398 ZBTB7AO95365 584 aa16.36■□□□□ 0.21
CCDC89-201ENST00000316398 PUS7Q96PZ0 661 aaKnown RBP16.36■□□□□ 0.21
CCDC89-201ENST00000316398 TRPM1Q7Z4N2 1603 aa16.36■□□□□ 0.21
CCDC89-201ENST00000316398 SGIP1Q9BQI5 828 aa16.36■□□□□ 0.21
CCDC89-201ENST00000316398 MTFR1LQ9H019 292 aa16.36■□□□□ 0.21
CCDC89-201ENST00000316398 ATF5Q9Y2D1 282 aaPredicted RBP16.36■□□□□ 0.21
CCDC89-201ENST00000316398 SBNO2Q9Y2G9 1366 aa16.35■□□□□ 0.21
CCDC89-201ENST00000316398 NEUROD1Q13562 356 aa16.35■□□□□ 0.21
CCDC89-201ENST00000316398 SYT17Q9BSW7 474 aa16.35■□□□□ 0.21
CCDC89-201ENST00000316398 RGPD5Q99666 1765 aa16.34■□□□□ 0.21
CCDC89-201ENST00000316398 ERBB3P21860 1342 aa16.34■□□□□ 0.21
CCDC89-201ENST00000316398 IL2RBP14784 551 aa16.34■□□□□ 0.21
CCDC89-201ENST00000316398 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.34■□□□□ 0.21
CCDC89-201ENST00000316398 NLRP2Q9NX02 1062 aa16.34■□□□□ 0.21
CCDC89-201ENST00000316398 NFAT5O94916 1531 aa16.34■□□□□ 0.21
CCDC89-201ENST00000316398 ABCC6O95255 1503 aa16.34■□□□□ 0.21
CCDC89-201ENST00000316398 CASZ1Q86V15 1759 aa16.34■□□□□ 0.21
CCDC89-201ENST00000316398 AKAP12Q02952 1782 aa16.32■□□□□ 0.2
CCDC89-201ENST00000316398 SLC12A5Q9H2X9 1139 aa16.32■□□□□ 0.2
CCDC89-201ENST00000316398 NME9Q86XW9 330 aa16.31■□□□□ 0.2
CCDC89-201ENST00000316398 FHDC1Q9C0D6 1143 aaPredicted RBP16.31■□□□□ 0.2
CCDC89-201ENST00000316398 HDGFL2Q7Z4V5 671 aaPredicted RBP16.3■□□□□ 0.2
CCDC89-201ENST00000316398 ACSBG1Q96GR2 724 aa16.3■□□□□ 0.2
CCDC89-201ENST00000316398 TNS2Q63HR2 1409 aa16.3■□□□□ 0.2
CCDC89-201ENST00000316398 WNK3Q9BYP7 1800 aa16.3■□□□□ 0.2
CCDC89-201ENST00000316398 UTRNP46939 3433 aa16.29■□□□□ 0.2
CCDC89-201ENST00000316398 ANKRD24Q8TF21 1146 aa16.29■□□□□ 0.2
CCDC89-201ENST00000316398 IP6K1Q92551 441 aa16.29■□□□□ 0.2
CCDC89-201ENST00000316398 TERF2IPQ9NYB0 399 aa16.29■□□□□ 0.2
CCDC89-201ENST00000316398 CD163L1Q9NR16 1453 aa16.29■□□□□ 0.2
CCDC89-201ENST00000316398 TMC1Q8TDI8 760 aa16.28■□□□□ 0.2
CCDC89-201ENST00000316398 ARXQ96QS3 562 aa16.28■□□□□ 0.2
CCDC89-201ENST00000316398 CARD11Q9BXL7 1154 aa16.28■□□□□ 0.2
CCDC89-201ENST00000316398 ZNF784Q8NCA9 323 aaPredicted RBP16.28■□□□□ 0.2
CCDC89-201ENST00000316398 SLC16A10Q8TF71 515 aa16.28■□□□□ 0.2
CCDC89-201ENST00000316398 LRRC4BQ9NT99 713 aa16.28■□□□□ 0.2
CCDC89-201ENST00000316398 SLC24A1O60721 1099 aa16.27■□□□□ 0.19
CCDC89-201ENST00000316398 SLC27A3Q5K4L6 730 aa16.27■□□□□ 0.19
CCDC89-201ENST00000316398 AKT1S1Q96B36 256 aa16.26■□□□□ 0.19
CCDC89-201ENST00000316398 MAP3K5Q99683 1374 aa16.25■□□□□ 0.19
CCDC89-201ENST00000316398 EDC4Q6P2E9 1401 aaKnown RBP16.25■□□□□ 0.19
CCDC89-201ENST00000316398 MON2Q7Z3U7 1717 aa16.24■□□□□ 0.19
CCDC89-201ENST00000316398 USP54Q70EL1 1684 aa16.24■□□□□ 0.19
CCDC89-201ENST00000316398 ZNF827Q17R98 1081 aa16.23■□□□□ 0.19
CCDC89-201ENST00000316398 NHSQ6T4R5 1651 aa16.23■□□□□ 0.19
CCDC89-201ENST00000316398 DDX54Q8TDD1 881 aaKnown RBP16.22■□□□□ 0.19
CCDC89-201ENST00000316398 MYOM1P52179 1685 aa16.22■□□□□ 0.19
CCDC89-201ENST00000316398 KAT6BQ8WYB5 2073 aa16.21■□□□□ 0.19
CCDC89-201ENST00000316398 PRIM1P49642 420 aaKnown RBP16.2■□□□□ 0.18
CCDC89-201ENST00000316398 TESK2Q96S53 571 aa16.2■□□□□ 0.18
CCDC89-201ENST00000316398 A0A1W2PP64 1363 aa16.2■□□□□ 0.18
CCDC89-201ENST00000316398 PAPPAQ13219 1627 aa16.19■□□□□ 0.18
CCDC89-201ENST00000316398 HOXC9P31274 260 aa16.19■□□□□ 0.18
CCDC89-201ENST00000316398 ZCRB1Q8TBF4 217 aaKnown RBP16.19■□□□□ 0.18
CCDC89-201ENST00000316398 COG3Q96JB2 828 aa16.19■□□□□ 0.18
CCDC89-201ENST00000316398 BTAF1O14981 1849 aa16.18■□□□□ 0.18
CCDC89-201ENST00000316398 LTN1O94822 1766 aa16.17■□□□□ 0.18
CCDC89-201ENST00000316398 ANKRD36BQ8N2N9 1353 aa16.17■□□□□ 0.18
CCDC89-201ENST00000316398 MAP3K19Q56UN5 1328 aa16.17■□□□□ 0.18
CCDC89-201ENST00000316398 PNPLA7Q6ZV29 1317 aa16.17■□□□□ 0.18
CCDC89-201ENST00000316398 ST20-MTHFSA0A0A6YYL1 179 aa16.17■□□□□ 0.18
CCDC89-201ENST00000316398 POLD1P28340 1107 aa16.17■□□□□ 0.18
CCDC89-201ENST00000316398 LTV1Q96GA3 475 aaPredicted RBP16.17■□□□□ 0.18
CCDC89-201ENST00000316398 TFCP2L1Q9NZI6 479 aa16.17■□□□□ 0.18
CCDC89-201ENST00000316398 HMGB2P26583 209 aaKnown RBP16.16■□□□□ 0.18
CCDC89-201ENST00000316398 AMPHP49418 695 aa16.16■□□□□ 0.18
CCDC89-201ENST00000316398 GPR162Q16538 588 aa16.16■□□□□ 0.18
CCDC89-201ENST00000316398 CHD4Q14839 1912 aa16.15■□□□□ 0.18
CCDC89-201ENST00000316398 CGNL1Q0VF96 1302 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms