RNA–Protein interactions for RNA: ENST00000313433.11

RPA2-201, Transcript of replication protein A2, humanhuman

TSL 1 (best) BASIC

Gene RPA2, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA2-201ENST00000313433 KIF20BQ96Q89 1820 aa25.68■■□□□ 1.7
RPA2-201ENST00000313433 KRT27Q7Z3Y8 459 aa25.68■■□□□ 1.7
RPA2-201ENST00000313433 KCNH5Q8NCM2 988 aa25.68■■□□□ 1.7
RPA2-201ENST00000313433 CRB1P82279 1406 aa25.67■■□□□ 1.7
RPA2-201ENST00000313433 EVA1CP58658 441 aa25.66■■□□□ 1.7
RPA2-201ENST00000313433 USP35Q9P2H5 1018 aa25.66■■□□□ 1.7
RPA2-201ENST00000313433 LRRC37A3O60309 1634 aa25.66■■□□□ 1.7
RPA2-201ENST00000313433 TNS1Q9HBL0 1735 aaKnown RBP25.65■■□□□ 1.7
RPA2-201ENST00000313433 A0A0G2JS52 829 aa25.64■■□□□ 1.7
RPA2-201ENST00000313433 HSPA5P11021 654 aaKnown RBP25.64■■□□□ 1.7
RPA2-201ENST00000313433 MYT1Q01538 1121 aa25.64■■□□□ 1.7
RPA2-201ENST00000313433 FAM182BQ5T319 152 aa25.64■■□□□ 1.7
RPA2-201ENST00000313433 BARGINQ6ZT62 677 aa25.64■■□□□ 1.7
RPA2-201ENST00000313433 BLMP54132 1417 aaPredicted RBP25.63■■□□□ 1.69
RPA2-201ENST00000313433 WDR17Q8IZU2 1322 aa25.62■■□□□ 1.69
RPA2-201ENST00000313433 RGPD1P0DJD0 1748 aa25.61■■□□□ 1.69
RPA2-201ENST00000313433 TCP11L2Q8N4U5 519 aa25.61■■□□□ 1.69
RPA2-201ENST00000313433 CARD14Q9BXL6 1004 aa25.6■■□□□ 1.69
RPA2-201ENST00000313433 PEAK1Q9H792 1746 aa25.6■■□□□ 1.69
RPA2-201ENST00000313433 CDCA8Q53HL2 280 aa25.58■■□□□ 1.69
RPA2-201ENST00000313433 DISP2A7MBM2 1401 aa25.57■■□□□ 1.68
RPA2-201ENST00000313433 EIF4G2P78344 907 aaKnown RBP eCLIP25.57■■□□□ 1.68
RPA2-201ENST00000313433 THRAP3Q9Y2W1 955 aaKnown RBP25.57■■□□□ 1.68
RPA2-201ENST00000313433 C11orf95C9JLR9 678 aaPredicted RBP25.56■■□□□ 1.68
RPA2-201ENST00000313433 FYB1O15117 783 aa25.56■■□□□ 1.68
RPA2-201ENST00000313433 FBLN1P23142 703 aa25.56■■□□□ 1.68
RPA2-201ENST00000313433 CCDC125Q86Z20 511 aa25.56■■□□□ 1.68
RPA2-201ENST00000313433 NSD3Q9BZ95 1437 aa25.54■■□□□ 1.68
RPA2-201ENST00000313433 TOM1L2Q6ZVM7 507 aa25.54■■□□□ 1.68
RPA2-201ENST00000313433 RGPD2P0DJD1 1756 aa25.54■■□□□ 1.68
RPA2-201ENST00000313433 DEFB132Q7Z7B7 95 aa25.53■■□□□ 1.68
RPA2-201ENST00000313433 GGNBP2Q9H3C7 697 aa25.53■■□□□ 1.68
RPA2-201ENST00000313433 ERBB3P21860 1342 aa25.53■■□□□ 1.68
RPA2-201ENST00000313433 FAM208AQ9UK61 1670 aaKnown RBP25.52■■□□□ 1.68
RPA2-201ENST00000313433 SBF2Q86WG5 1849 aa25.52■■□□□ 1.68
RPA2-201ENST00000313433 COG3Q96JB2 828 aa25.52■■□□□ 1.68
RPA2-201ENST00000313433 CARD10Q9BWT7 1032 aa25.51■■□□□ 1.67
RPA2-201ENST00000313433 MAP3K19Q56UN5 1328 aa25.5■■□□□ 1.67
RPA2-201ENST00000313433 ANKRD26Q9UPS8 1709 aa25.5■■□□□ 1.67
RPA2-201ENST00000313433 CSB-PGBD3P0DP91 1061 aa25.47■■□□□ 1.67
RPA2-201ENST00000313433 IP6K1Q92551 441 aa25.47■■□□□ 1.67
RPA2-201ENST00000313433 ANKRD24Q8TF21 1146 aa25.46■■□□□ 1.67
RPA2-201ENST00000313433 CCDC7Q96M83 1385 aa25.45■■□□□ 1.67
RPA2-201ENST00000313433 HOXC9P31274 260 aa25.44■■□□□ 1.66
RPA2-201ENST00000313433 RRS1Q15050 365 aaKnown RBP25.44■■□□□ 1.66
RPA2-201ENST00000313433 POLR3GLQ9BT43 218 aa25.44■■□□□ 1.66
RPA2-201ENST00000313433 PDE3BQ13370 1112 aa25.43■■□□□ 1.66
RPA2-201ENST00000313433 FAM196AQ6ZSG2 479 aa25.43■■□□□ 1.66
RPA2-201ENST00000313433 RREB1Q92766 1687 aa25.42■■□□□ 1.66
RPA2-201ENST00000313433 TNS2Q63HR2 1409 aa25.42■■□□□ 1.66
RPA2-201ENST00000313433 RTL1A6NKG5 1358 aa25.42■■□□□ 1.66
RPA2-201ENST00000313433 SHANK3Q9BYB0 1731 aa25.41■■□□□ 1.66
RPA2-201ENST00000313433 OVOS2A0A0G2JMS6 1433 aa25.41■■□□□ 1.66
RPA2-201ENST00000313433 TRIM37O94972 964 aa25.41■■□□□ 1.66
RPA2-201ENST00000313433 MAP2P11137 1827 aaKnown RBP25.4■■□□□ 1.66
RPA2-201ENST00000313433 DDB1Q16531 1140 aa25.4■■□□□ 1.66
RPA2-201ENST00000313433 MARCH10Q8NA82 808 aaPredicted RBP25.4■■□□□ 1.66
RPA2-201ENST00000313433 NLRP2Q9NX02 1062 aa25.4■■□□□ 1.66
RPA2-201ENST00000313433 SF3B2Q13435 895 aaKnown RBP25.39■■□□□ 1.66
RPA2-201ENST00000313433 CDCA7Q9BWT1 371 aaPredicted RBP25.38■■□□□ 1.65
RPA2-201ENST00000313433 NUP188Q5SRE5 1749 aa25.37■■□□□ 1.65
RPA2-201ENST00000313433 EN1Q05925 392 aaPredicted RBP25.37■■□□□ 1.65
RPA2-201ENST00000313433 LTV1Q96GA3 475 aaPredicted RBP25.37■■□□□ 1.65
RPA2-201ENST00000313433 KIF7Q2M1P5 1343 aa25.37■■□□□ 1.65
RPA2-201ENST00000313433 BAG6P46379 1132 aa25.36■■□□□ 1.65
RPA2-201ENST00000313433 PANK3Q9H999 370 aa25.36■■□□□ 1.65
RPA2-201ENST00000313433 BCL9O00512 1426 aa25.36■■□□□ 1.65
RPA2-201ENST00000313433 AMPHP49418 695 aa25.35■■□□□ 1.65
RPA2-201ENST00000313433 PTF1AQ7RTS3 328 aa25.35■■□□□ 1.65
RPA2-201ENST00000313433 CGNL1Q0VF96 1302 aa25.35■■□□□ 1.65
RPA2-201ENST00000313433 RGPD3A6NKT7 1758 aaPredicted RBP25.34■■□□□ 1.65
RPA2-201ENST00000313433 RGPD4Q7Z3J3 1758 aa25.34■■□□□ 1.65
RPA2-201ENST00000313433 EMILIN1Q9Y6C2 1016 aa25.34■■□□□ 1.65
RPA2-201ENST00000313433 NHSQ6T4R5 1651 aa25.33■■□□□ 1.65
RPA2-201ENST00000313433 MEGF6O75095 1541 aa25.32■■□□□ 1.64
RPA2-201ENST00000313433 FLT4P35916 1363 aa25.32■■□□□ 1.64
RPA2-201ENST00000313433 HSP90AB2PQ58FF8 381 aa25.32■■□□□ 1.64
RPA2-201ENST00000313433 CAMKK2Q96RR4 588 aa25.32■■□□□ 1.64
RPA2-201ENST00000313433 INSRP06213 1382 aa25.31■■□□□ 1.64
RPA2-201ENST00000313433 IL2RBP14784 551 aa25.31■■□□□ 1.64
RPA2-201ENST00000313433 EZH2Q15910 746 aaKnown RBP25.31■■□□□ 1.64
RPA2-201ENST00000313433 KIF24Q5T7B8 1368 aa25.31■■□□□ 1.64
RPA2-201ENST00000313433 NBPF6Q5VWK0 638 aa25.29■■□□□ 1.64
RPA2-201ENST00000313433 NBPF4Q96M43 638 aa25.29■■□□□ 1.64
RPA2-201ENST00000313433 EXOC5O00471 708 aa25.28■■□□□ 1.64
RPA2-201ENST00000313433 APBA3O96018 575 aa25.28■■□□□ 1.64
RPA2-201ENST00000313433 SRCAPQ6ZRS2 3230 aa25.27■■□□□ 1.64
RPA2-201ENST00000313433 WASHC2AQ641Q2 1341 aa25.27■■□□□ 1.64
RPA2-201ENST00000313433 NCAPD2Q15021 1401 aa25.27■■□□□ 1.64
RPA2-201ENST00000313433 USHBP1Q8N6Y0 703 aa25.26■■□□□ 1.63
RPA2-201ENST00000313433 POLKQ9UBT6 870 aa25.25■■□□□ 1.63
RPA2-201ENST00000313433 BTAF1O14981 1849 aa25.24■■□□□ 1.63
RPA2-201ENST00000313433 DOT1LQ8TEK3 1739 aa25.24■■□□□ 1.63
RPA2-201ENST00000313433 SMG6Q86US8 1419 aaKnown RBP25.24■■□□□ 1.63
RPA2-201ENST00000313433 PARD3Q8TEW0 1356 aa25.24■■□□□ 1.63
RPA2-201ENST00000313433 NSD2O96028 1365 aa25.23■■□□□ 1.63
RPA2-201ENST00000313433 BCL11BQ9C0K0 894 aaPredicted RBP25.22■■□□□ 1.63
RPA2-201ENST00000313433 PKD1L3Q7Z443 1732 aa25.22■■□□□ 1.63
RPA2-201ENST00000313433 KCNQ2O43526 872 aa25.21■■□□□ 1.63
RPA2-201ENST00000313433 TNNT2P45379 298 aaPredicted RBP25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms