RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 PDCL3Q9H2J4 239 aa10.51□□□□□ -0.73
COL6A5-202ENST00000312481 DYNC1I1O14576 645 aa10.51□□□□□ -0.73
COL6A5-202ENST00000312481 ARAP3Q8WWN8 1544 aa10.51□□□□□ -0.73
COL6A5-202ENST00000312481 A6NNZ2 444 aa10.51□□□□□ -0.73
COL6A5-202ENST00000312481 CPLX1O14810 134 aa10.51□□□□□ -0.73
COL6A5-202ENST00000312481 KRT85P78386 507 aa10.51□□□□□ -0.73
COL6A5-202ENST00000312481 G3BP1Q13283 466 aaKnown RBP eCLIP10.51□□□□□ -0.73
COL6A5-202ENST00000312481 TUBB8Q3ZCM7 444 aa10.51□□□□□ -0.73
COL6A5-202ENST00000312481 CDC42BPBQ9Y5S2 1711 aa10.5□□□□□ -0.73
COL6A5-202ENST00000312481 GNAI2P04899 355 aa10.5□□□□□ -0.73
COL6A5-202ENST00000312481 TXLNAP40222 546 aa10.5□□□□□ -0.73
COL6A5-202ENST00000312481 ZSCAN25Q6NSZ9 544 aa10.5□□□□□ -0.73
COL6A5-202ENST00000312481 SETD1BQ9UPS6 1966 aaKnown RBP10.5□□□□□ -0.73
COL6A5-202ENST00000312481 EIF4G3O43432 1585 aaKnown RBP10.5□□□□□ -0.73
COL6A5-202ENST00000312481 COL17A1Q9UMD9 1497 aaPredicted RBP10.5□□□□□ -0.73
COL6A5-202ENST00000312481 RIPK4P57078 832 aa10.5□□□□□ -0.73
COL6A5-202ENST00000312481 IFT57Q9NWB7 429 aa10.5□□□□□ -0.73
COL6A5-202ENST00000312481 IQGAP3Q86VI3 1631 aa10.5□□□□□ -0.73
COL6A5-202ENST00000312481 GOLGA6L7A0A1B0GV03 622 aa10.5□□□□□ -0.73
COL6A5-202ENST00000312481 WASF1Q92558 559 aa10.5□□□□□ -0.73
COL6A5-202ENST00000312481 PLB1Q6P1J6 1458 aa10.5□□□□□ -0.73
COL6A5-202ENST00000312481 SBNO2Q9Y2G9 1366 aa10.5□□□□□ -0.73
COL6A5-202ENST00000312481 GSDMDP57764 484 aa10.5□□□□□ -0.73
COL6A5-202ENST00000312481 MAP9Q49MG5 647 aa10.5□□□□□ -0.73
COL6A5-202ENST00000312481 TAF7LQ5H9L4 462 aa10.5□□□□□ -0.73
COL6A5-202ENST00000312481 ERICH2A1L162 156 aa10.49□□□□□ -0.73
COL6A5-202ENST00000312481 BMP2KLQ5H9B9 411 aa10.49□□□□□ -0.73
COL6A5-202ENST00000312481 PRAG1Q86YV5 1406 aa10.49□□□□□ -0.73
COL6A5-202ENST00000312481 A0A0G2JS52 829 aa10.49□□□□□ -0.73
COL6A5-202ENST00000312481 FILIP1LQ4L180 1135 aa10.49□□□□□ -0.73
COL6A5-202ENST00000312481 KDM5CP41229 1560 aa10.49□□□□□ -0.73
COL6A5-202ENST00000312481 APAF1O14727 1248 aa10.49□□□□□ -0.73
COL6A5-202ENST00000312481 CTNNA3Q9UI47 895 aa10.49□□□□□ -0.73
COL6A5-202ENST00000312481 SMTNL1A8MU46 457 aa10.49□□□□□ -0.73
COL6A5-202ENST00000312481 ESPNB1AK53 854 aa10.49□□□□□ -0.73
COL6A5-202ENST00000312481 SLC3A2P08195 630 aaKnown RBP10.48□□□□□ -0.73
COL6A5-202ENST00000312481 MNS1Q8NEH6 495 aa10.48□□□□□ -0.73
COL6A5-202ENST00000312481 PPIP5K1Q6PFW1 1433 aa10.48□□□□□ -0.73
COL6A5-202ENST00000312481 ATL3Q6DD88 541 aa10.48□□□□□ -0.73
COL6A5-202ENST00000312481 STIM1Q13586 685 aa10.48□□□□□ -0.73
COL6A5-202ENST00000312481 GZF1Q9H116 711 aaPredicted RBP10.48□□□□□ -0.73
COL6A5-202ENST00000312481 POLR3AO14802 1390 aaPredicted RBP10.48□□□□□ -0.73
COL6A5-202ENST00000312481 HDAC1Q13547 482 aaPredicted RBP10.48□□□□□ -0.73
COL6A5-202ENST00000312481 NGDNQ8NEJ9 315 aaKnown RBP10.48□□□□□ -0.73
COL6A5-202ENST00000312481 ABCC10Q5T3U5 1492 aa10.48□□□□□ -0.73
COL6A5-202ENST00000312481 KIF24Q5T7B8 1368 aa10.48□□□□□ -0.73
COL6A5-202ENST00000312481 GGT6Q6P531 493 aa10.48□□□□□ -0.73
COL6A5-202ENST00000312481 RALYLQ86SE5 291 aaKnown RBP10.48□□□□□ -0.73
COL6A5-202ENST00000312481 CCDC83Q8IWF9 413 aa10.48□□□□□ -0.73
COL6A5-202ENST00000312481 PHAXQ9H814 394 aaKnown RBP10.48□□□□□ -0.73
COL6A5-202ENST00000312481 MCM4P33991 863 aa10.47□□□□□ -0.73
COL6A5-202ENST00000312481 LEKR1Q6ZMV7 388 aa10.47□□□□□ -0.73
COL6A5-202ENST00000312481 SNX21Q969T3 373 aa10.47□□□□□ -0.73
COL6A5-202ENST00000312481 GRPEL1Q9HAV7 217 aa10.47□□□□□ -0.73
COL6A5-202ENST00000312481 HOXA7P31268 230 aaPredicted RBP10.47□□□□□ -0.73
COL6A5-202ENST00000312481 DHX37Q8IY37 1157 aaKnown RBP10.47□□□□□ -0.73
COL6A5-202ENST00000312481 ERLIN2O94905 339 aa10.47□□□□□ -0.73
COL6A5-202ENST00000312481 TRAPPC8Q9Y2L5 1435 aa10.47□□□□□ -0.73
COL6A5-202ENST00000312481 SLFN5Q08AF3 891 aa10.47□□□□□ -0.73
COL6A5-202ENST00000312481 FOXD1Q16676 465 aa10.47□□□□□ -0.73
COL6A5-202ENST00000312481 JAKMIP3Q5VZ66 844 aa10.47□□□□□ -0.73
COL6A5-202ENST00000312481 PAXBP1Q9Y5B6 917 aa10.47□□□□□ -0.73
COL6A5-202ENST00000312481 UBTFL1P0CB47 393 aaPredicted RBP10.46□□□□□ -0.73
COL6A5-202ENST00000312481 KDM5BQ9UGL1 1544 aa10.46□□□□□ -0.73
COL6A5-202ENST00000312481 TICAM2Q86XR7 235 aa10.46□□□□□ -0.73
COL6A5-202ENST00000312481 CCDC146Q8IYE0 955 aa10.46□□□□□ -0.73
COL6A5-202ENST00000312481 CCDC112Q8NEF3 446 aa10.46□□□□□ -0.73
COL6A5-202ENST00000312481 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.46□□□□□ -0.736e-7■■■■■ 44.3
COL6A5-202ENST00000312481 URB2Q14146 1524 aaKnown RBP10.46□□□□□ -0.73
COL6A5-202ENST00000312481 TTC5Q8N0Z6 440 aa10.46□□□□□ -0.73
COL6A5-202ENST00000312481 COG6Q9Y2V7 657 aa10.46□□□□□ -0.74
COL6A5-202ENST00000312481 BLMP54132 1417 aaPredicted RBP10.46□□□□□ -0.74
COL6A5-202ENST00000312481 FMNL3Q8IVF7 1028 aa10.46□□□□□ -0.74
COL6A5-202ENST00000312481 ZNF771Q7L3S4 317 aaPredicted RBP10.46□□□□□ -0.74
COL6A5-202ENST00000312481 PES1O00541 588 aaKnown RBP10.45□□□□□ -0.74
COL6A5-202ENST00000312481 MYO1BO43795 1136 aa10.45□□□□□ -0.74
COL6A5-202ENST00000312481 HOMER1Q86YM7 354 aa10.45□□□□□ -0.74
COL6A5-202ENST00000312481 HMG20BQ9P0W2 317 aa10.45□□□□□ -0.74
COL6A5-202ENST00000312481 SRRTQ9BXP5 876 aaKnown RBP10.45□□□□□ -0.74
COL6A5-202ENST00000312481 ZSCAN12O43309 604 aa10.45□□□□□ -0.74
COL6A5-202ENST00000312481 ZRSR2Q15696 482 aaKnown RBP10.45□□□□□ -0.74
COL6A5-202ENST00000312481 CCDC191Q8NCU4 936 aa10.45□□□□□ -0.74
COL6A5-202ENST00000312481 ARHGEF11O15085 1522 aa10.45□□□□□ -0.74
COL6A5-202ENST00000312481 CEP131Q9UPN4 1083 aa10.45□□□□□ -0.74
COL6A5-202ENST00000312481 BICD2Q8TD16 824 aa10.44□□□□□ -0.74
COL6A5-202ENST00000312481 DDX12PQ92771 950 aa10.44□□□□□ -0.74
COL6A5-202ENST00000312481 CTR9Q6PD62 1173 aa10.44□□□□□ -0.74
COL6A5-202ENST00000312481 CEP57L1Q8IYX8 460 aa10.44□□□□□ -0.74
COL6A5-202ENST00000312481 RBM25P49756 843 aaKnown RBP10.44□□□□□ -0.74
COL6A5-202ENST00000312481 BABAM1Q9NWV8 329 aa10.44□□□□□ -0.74
COL6A5-202ENST00000312481 NPHP1O15259 732 aa10.44□□□□□ -0.74
COL6A5-202ENST00000312481 EHBP1Q8NDI1 1231 aa10.44□□□□□ -0.74
COL6A5-202ENST00000312481 CALCOCO1Q9P1Z2 691 aa10.44□□□□□ -0.74
COL6A5-202ENST00000312481 CYP46A1Q9Y6A2 500 aa10.44□□□□□ -0.74
COL6A5-202ENST00000312481 RASSF8Q8NHQ8 419 aa10.44□□□□□ -0.74
COL6A5-202ENST00000312481 LRRCC1Q9C099 1032 aa10.44□□□□□ -0.74
COL6A5-202ENST00000312481 UNC13BO14795 1591 aa10.44□□□□□ -0.74
COL6A5-202ENST00000312481 CCDC183Q5T5S1 534 aa10.44□□□□□ -0.74
COL6A5-202ENST00000312481 CHD1LQ86WJ1 897 aa10.44□□□□□ -0.74
COL6A5-202ENST00000312481 ASXL2Q76L83 1435 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms