RNA–Protein interactions for RNA: ENST00000311745.9

RBFOX1-201, Transcript of RNA binding fox-1 homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBFOX1, Length 3,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-201ENST00000311745 TPM2P07951 284 aa12.09□□□□□ -0.47
RBFOX1-201ENST00000311745 AEBP1Q8IUX7 1158 aa12.09□□□□□ -0.47
RBFOX1-201ENST00000311745 CABP1Q9NZU7 370 aa12.09□□□□□ -0.47
RBFOX1-201ENST00000311745 TRIM35Q9UPQ4 493 aa12.09□□□□□ -0.47
RBFOX1-201ENST00000311745 L1TD1Q5T7N2 865 aaKnown RBP12.08□□□□□ -0.47
RBFOX1-201ENST00000311745 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.08□□□□□ -0.47
RBFOX1-201ENST00000311745 PRR36Q9H6K5 1346 aa12.08□□□□□ -0.48
RBFOX1-201ENST00000311745 SRPK2P78362 688 aaKnown RBP12.08□□□□□ -0.48
RBFOX1-201ENST00000311745 NCKAP5LQ9HCH0 1330 aa12.08□□□□□ -0.48
RBFOX1-201ENST00000311745 ZBTB22O15209 634 aa12.08□□□□□ -0.48
RBFOX1-201ENST00000311745 PDE4AP27815 886 aa12.08□□□□□ -0.48
RBFOX1-201ENST00000311745 PPIP5K1Q6PFW1 1433 aa12.07□□□□□ -0.48
RBFOX1-201ENST00000311745 FBLN1P23142 703 aa12.07□□□□□ -0.48
RBFOX1-201ENST00000311745 TNNQ9UQP3 1299 aa12.07□□□□□ -0.48
RBFOX1-201ENST00000311745 FMN2Q9NZ56 1722 aa12.07□□□□□ -0.48
RBFOX1-201ENST00000311745 SIRT1Q96EB6 747 aa12.06□□□□□ -0.48
RBFOX1-201ENST00000311745 USP54Q70EL1 1684 aa12.06□□□□□ -0.48
RBFOX1-201ENST00000311745 EDC4Q6P2E9 1401 aaKnown RBP12.06□□□□□ -0.48
RBFOX1-201ENST00000311745 KIAA1211Q6ZU35 1233 aa12.06□□□□□ -0.48
RBFOX1-201ENST00000311745 WDR63Q8IWG1 891 aa12.06□□□□□ -0.48
RBFOX1-201ENST00000311745 SMAP1Q8IYB5 467 aaPredicted RBP12.06□□□□□ -0.48
RBFOX1-201ENST00000311745 LTKP29376 864 aa12.06□□□□□ -0.48
RBFOX1-201ENST00000311745 KCNG1Q9UIX4 513 aa12.05□□□□□ -0.48
RBFOX1-201ENST00000311745 PLEKHG1Q9ULL1 1385 aa12.05□□□□□ -0.48
RBFOX1-201ENST00000311745 RARSP54136 660 aaKnown RBP12.05□□□□□ -0.48
RBFOX1-201ENST00000311745 SSH2Q76I76 1423 aa12.05□□□□□ -0.48
RBFOX1-201ENST00000311745 CDK12Q9NYV4 1490 aaPredicted RBP12.05□□□□□ -0.48
RBFOX1-201ENST00000311745 IRX3P78415 501 aaPredicted RBP12.05□□□□□ -0.48
RBFOX1-201ENST00000311745 BACH2Q9BYV9 841 aa12.05□□□□□ -0.48
RBFOX1-201ENST00000311745 WASLO00401 505 aaPredicted RBP12.04□□□□□ -0.48
RBFOX1-201ENST00000311745 RLBP1P12271 317 aa12.04□□□□□ -0.48
RBFOX1-201ENST00000311745 PANK2Q9BZ23 570 aa12.04□□□□□ -0.48
RBFOX1-201ENST00000311745 POLKQ9UBT6 870 aa12.04□□□□□ -0.48
RBFOX1-201ENST00000311745 ZRANB1Q9UGI0 708 aa12.04□□□□□ -0.48
RBFOX1-201ENST00000311745 PATL2C9JE40 543 aaKnown RBP12.04□□□□□ -0.48
RBFOX1-201ENST00000311745 TAOK2Q9UL54 1235 aa12.04□□□□□ -0.48
RBFOX1-201ENST00000311745 TPRNQ4KMQ1 711 aa12.03□□□□□ -0.48
RBFOX1-201ENST00000311745 PIK3C2AO00443 1686 aa12.03□□□□□ -0.48
RBFOX1-201ENST00000311745 TCERG1O14776 1098 aaKnown RBP12.03□□□□□ -0.48
RBFOX1-201ENST00000311745 IGHDP01880 384 aa12.03□□□□□ -0.48
RBFOX1-201ENST00000311745 TXNDC2Q86VQ3 553 aa12.03□□□□□ -0.48
RBFOX1-201ENST00000311745 GZF1Q9H116 711 aaPredicted RBP12.03□□□□□ -0.48
RBFOX1-201ENST00000311745 TERF2IPQ9NYB0 399 aa12.03□□□□□ -0.48
RBFOX1-201ENST00000311745 APPP05067 770 aa12.02□□□□□ -0.49
RBFOX1-201ENST00000311745 MS4A1P11836 297 aa12.02□□□□□ -0.49
RBFOX1-201ENST00000311745 AATKQ6ZMQ8 1374 aa12.02□□□□□ -0.49
RBFOX1-201ENST00000311745 DIP2AQ14689 1571 aa12.02□□□□□ -0.49
RBFOX1-201ENST00000311745 OVOS2A0A0J9YW53 1432 aa12.01□□□□□ -0.49
RBFOX1-201ENST00000311745 OVOS2Q6IE36 1432 aa12.01□□□□□ -0.49
RBFOX1-201ENST00000311745 ZNF142P52746 1687 aaPredicted RBP12.01□□□□□ -0.49
RBFOX1-201ENST00000311745 TMPOP42166 694 aaKnown RBP12.01□□□□□ -0.49
RBFOX1-201ENST00000311745 ESPNB1AK53 854 aa12.01□□□□□ -0.49
RBFOX1-201ENST00000311745 NEUROD2Q15784 382 aa12.01□□□□□ -0.49
RBFOX1-201ENST00000311745 ABCF1Q8NE71 845 aaKnown RBP eCLIP12□□□□□ -0.49
RBFOX1-201ENST00000311745 PANK1Q8TE04 598 aa12□□□□□ -0.49
RBFOX1-201ENST00000311745 TRIM44Q96DX7 344 aaPredicted RBP12□□□□□ -0.49
RBFOX1-201ENST00000311745 U2AF1L5P0DN76 240 aaPredicted RBP12□□□□□ -0.49
RBFOX1-201ENST00000311745 U2AF1Q01081 240 aaKnown RBP eCLIP12□□□□□ -0.49
RBFOX1-201ENST00000311745 PDE3AQ14432 1141 aa12□□□□□ -0.49
RBFOX1-201ENST00000311745 NME9Q86XW9 330 aa12□□□□□ -0.49
RBFOX1-201ENST00000311745 BCCIPQ9P287 314 aaKnown RBP eCLIP12□□□□□ -0.49
RBFOX1-201ENST00000311745 CEBPAP49715 358 aaPredicted RBP11.99□□□□□ -0.49
RBFOX1-201ENST00000311745 STAG3Q9UJ98 1225 aa11.99□□□□□ -0.49
RBFOX1-201ENST00000311745 CHD2O14647 1828 aaKnown RBP11.99□□□□□ -0.49
RBFOX1-201ENST00000311745 IL13P35225 146 aa11.99□□□□□ -0.49
RBFOX1-201ENST00000311745 C8orf34Q49A92 452 aa11.99□□□□□ -0.49
RBFOX1-201ENST00000311745 CENPQQ7L2Z9 268 aaPredicted RBP11.99□□□□□ -0.49
RBFOX1-201ENST00000311745 CFAP53Q96M91 514 aa11.99□□□□□ -0.49
RBFOX1-201ENST00000311745 XRCC6P12956 609 aaKnown RBP eCLIP11.99□□□□□ -0.49
RBFOX1-201ENST00000311745 RGS22Q8NE09 1264 aa11.99□□□□□ -0.49
RBFOX1-201ENST00000311745 NUDT16Q96DE0 195 aaKnown RBP11.99□□□□□ -0.49
RBFOX1-201ENST00000311745 PTCH1Q13635 1447 aa11.99□□□□□ -0.49
RBFOX1-201ENST00000311745 GOLGA6L3A6NEY3 463 aa11.98□□□□□ -0.49
RBFOX1-201ENST00000311745 TSR2Q969E8 191 aaKnown RBP11.98□□□□□ -0.49
RBFOX1-201ENST00000311745 HDGFL2Q7Z4V5 671 aaPredicted RBP11.98□□□□□ -0.49
RBFOX1-201ENST00000311745 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.98□□□□□ -0.49
RBFOX1-201ENST00000311745 ZBTB9Q96C00 473 aa11.98□□□□□ -0.49
RBFOX1-201ENST00000311745 PHACTR3Q96KR7 559 aa11.98□□□□□ -0.49
RBFOX1-201ENST00000311745 CGNQ9P2M7 1197 aaKnown RBP11.98□□□□□ -0.49
RBFOX1-201ENST00000311745 EMILIN1Q9Y6C2 1016 aa11.98□□□□□ -0.49
RBFOX1-201ENST00000311745 DMTNQ08495 405 aa11.97□□□□□ -0.49
RBFOX1-201ENST00000311745 CHMP4CQ96CF2 233 aa11.97□□□□□ -0.49
RBFOX1-201ENST00000311745 CEP170BQ9Y4F5 1589 aaPredicted RBP11.97□□□□□ -0.49
RBFOX1-201ENST00000311745 RNF216Q9NWF9 866 aaPredicted RBP11.96□□□□□ -0.49
RBFOX1-201ENST00000311745 ADAMTSL3P82987 1691 aa11.96□□□□□ -0.49
RBFOX1-201ENST00000311745 IL16Q14005 1332 aa11.96□□□□□ -0.49
RBFOX1-201ENST00000311745 CHRM1P11229 460 aaPredicted RBP11.96□□□□□ -0.49
RBFOX1-201ENST00000311745 PCDHB15Q9Y5E8 787 aa11.96□□□□□ -0.49
RBFOX1-201ENST00000311745 USP6P35125 1406 aa11.96□□□□□ -0.5
RBFOX1-201ENST00000311745 DIAPH1O60610 1272 aaKnown RBP11.96□□□□□ -0.5
RBFOX1-201ENST00000311745 MAP7D2Q96T17 732 aa11.96□□□□□ -0.5
RBFOX1-201ENST00000311745 MYCNP04198 464 aaPredicted RBP11.95□□□□□ -0.5
RBFOX1-201ENST00000311745 USP31Q70CQ4 1352 aa11.95□□□□□ -0.5
RBFOX1-201ENST00000311745 COG6Q9Y2V7 657 aa11.95□□□□□ -0.5
RBFOX1-201ENST00000311745 NWD1Q149M9 1564 aa11.95□□□□□ -0.5
RBFOX1-201ENST00000311745 LRRC37A3O60309 1634 aa11.95□□□□□ -0.5
RBFOX1-201ENST00000311745 BCL2L13Q9BXK5 485 aa11.94□□□□□ -0.5
RBFOX1-201ENST00000311745 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.94□□□□□ -0.5
RBFOX1-201ENST00000311745 MYH16Q9H6N6 1097 aa11.94□□□□□ -0.5
RBFOX1-201ENST00000311745 HDAC5Q9UQL6 1122 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms