RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 FMNL2Q96PY5 1086 aa15.61■□□□□ 0.09
SNED1-201ENST00000310397 TMEM132EQ6IEE7 984 aa15.61■□□□□ 0.09
SNED1-201ENST00000310397 DHX29Q7Z478 1369 aaKnown RBP15.61■□□□□ 0.09
SNED1-201ENST00000310397 SERPINC1P01008 464 aa15.61■□□□□ 0.09
SNED1-201ENST00000310397 HMGXB3Q12766 1538 aa15.6■□□□□ 0.09
SNED1-201ENST00000310397 NUP62CLQ9H1M0 184 aa15.6■□□□□ 0.09
SNED1-201ENST00000310397 PATL2C9JE40 543 aaKnown RBP15.6■□□□□ 0.09
SNED1-201ENST00000310397 MCM5P33992 734 aa15.6■□□□□ 0.09
SNED1-201ENST00000310397 ME1P48163 572 aa15.6■□□□□ 0.09
SNED1-201ENST00000310397 TXLNBQ8N3L3 684 aa15.6■□□□□ 0.09
SNED1-201ENST00000310397 LUC7LQ9NQ29 371 aaKnown RBP15.6■□□□□ 0.09
SNED1-201ENST00000310397 ZNHIT6Q9NWK9 470 aaKnown RBP15.6■□□□□ 0.09
SNED1-201ENST00000310397 LRPPRCP42704 1394 aaKnown RBP15.6■□□□□ 0.09
SNED1-201ENST00000310397 SLC4A2P04920 1241 aa15.59■□□□□ 0.09
SNED1-201ENST00000310397 RPAP2Q8IXW5 612 aaPredicted RBP15.59■□□□□ 0.09
SNED1-201ENST00000310397 RAPGEF4Q8WZA2 1011 aa15.59■□□□□ 0.09
SNED1-201ENST00000310397 EVA1CP58658 441 aa15.59■□□□□ 0.09
SNED1-201ENST00000310397 MAGEC2Q9UBF1 373 aaPredicted RBP15.59■□□□□ 0.09
SNED1-201ENST00000310397 TBC1D2BQ9UPU7 963 aa15.59■□□□□ 0.09
SNED1-201ENST00000310397 KRT32Q14532 448 aa15.59■□□□□ 0.09
SNED1-201ENST00000310397 SLC12A5Q9H2X9 1139 aa15.59■□□□□ 0.09
SNED1-201ENST00000310397 PPP6R1Q9UPN7 881 aa15.59■□□□□ 0.09
SNED1-201ENST00000310397 ANKRD30BQ9BXX2 1392 aa15.58■□□□□ 0.09
SNED1-201ENST00000310397 CC2D2AQ9P2K1 1620 aa15.58■□□□□ 0.09
SNED1-201ENST00000310397 MAP3K11Q16584 847 aa15.58■□□□□ 0.09
SNED1-201ENST00000310397 DNMBPQ6XZF7 1577 aa15.58■□□□□ 0.09
SNED1-201ENST00000310397 EPRSP07814 1512 aaKnown RBP15.58■□□□□ 0.09
SNED1-201ENST00000310397 CEP57L1Q8IYX8 460 aa15.58■□□□□ 0.09
SNED1-201ENST00000310397 SYCE3A1L190 88 aa15.58■□□□□ 0.08
SNED1-201ENST00000310397 PPFIBP1Q86W92 1011 aa15.58■□□□□ 0.08
SNED1-201ENST00000310397 SPATA32Q96LK8 384 aa15.58■□□□□ 0.08
SNED1-201ENST00000310397 AXDND1Q5T1B0 1012 aaPredicted RBP15.58■□□□□ 0.08
SNED1-201ENST00000310397 ABCC11Q96J66 1382 aa15.58■□□□□ 0.08
SNED1-201ENST00000310397 BLOC1S2Q6QNY1 142 aa15.58■□□□□ 0.08
SNED1-201ENST00000310397 FCHSD2O94868 740 aa15.58■□□□□ 0.08
SNED1-201ENST00000310397 BCL11BQ9C0K0 894 aaPredicted RBP15.58■□□□□ 0.08
SNED1-201ENST00000310397 CCDC183Q5T5S1 534 aa15.57■□□□□ 0.08
SNED1-201ENST00000310397 IQGAP2Q13576 1575 aa15.57■□□□□ 0.08
SNED1-201ENST00000310397 IQCEQ6IPM2 695 aa15.57■□□□□ 0.08
SNED1-201ENST00000310397 GPRASP1Q5JY77 1395 aa15.57■□□□□ 0.08
SNED1-201ENST00000310397 GOLGA6L10A6NI86 522 aa15.57■□□□□ 0.08
SNED1-201ENST00000310397 AIMP1Q12904 312 aaKnown RBP15.57■□□□□ 0.08
SNED1-201ENST00000310397 TRIM34Q9BYJ4 488 aa15.57■□□□□ 0.08
SNED1-201ENST00000310397 USP8P40818 1118 aa15.56■□□□□ 0.08
SNED1-201ENST00000310397 ALDH1L2Q3SY69 923 aa15.56■□□□□ 0.08
SNED1-201ENST00000310397 CT47A1Q5JQC4 288 aaPredicted RBP15.56■□□□□ 0.08
SNED1-201ENST00000310397 ZNF692Q9BU19 519 aaPredicted RBP15.56■□□□□ 0.08
SNED1-201ENST00000310397 ATAD2Q6PL18 1390 aa15.56■□□□□ 0.08
SNED1-201ENST00000310397 TTLL5Q6EMB2 1281 aa15.56■□□□□ 0.08
SNED1-201ENST00000310397 SMTNL1A8MU46 457 aa15.56■□□□□ 0.08
SNED1-201ENST00000310397 STIM1Q13586 685 aa15.55■□□□□ 0.08
SNED1-201ENST00000310397 HDGFL1Q5TGJ6 251 aa15.55■□□□□ 0.08
SNED1-201ENST00000310397 RPRD2Q5VT52 1461 aaKnown RBP15.55■□□□□ 0.08
SNED1-201ENST00000310397 KIAA0754O94854 1291 aa15.55■□□□□ 0.08
SNED1-201ENST00000310397 KIF14Q15058 1648 aa15.55■□□□□ 0.08
SNED1-201ENST00000310397 CEBPZQ03701 1054 aaKnown RBP15.55■□□□□ 0.08
SNED1-201ENST00000310397 TMEM57Q8N5G2 664 aa15.55■□□□□ 0.08
SNED1-201ENST00000310397 TMPOP42166 694 aaKnown RBP15.55■□□□□ 0.08
SNED1-201ENST00000310397 RARSP54136 660 aaKnown RBP15.54■□□□□ 0.08
SNED1-201ENST00000310397 TBC1D2Q9BYX2 928 aa15.54■□□□□ 0.08
SNED1-201ENST00000310397 CDKL5O76039 1030 aa15.54■□□□□ 0.08
SNED1-201ENST00000310397 ERLIN2O94905 339 aa15.54■□□□□ 0.08
SNED1-201ENST00000310397 TRIM22Q8IYM9 498 aa15.54■□□□□ 0.08
SNED1-201ENST00000310397 ODF2Q5BJF6 829 aa15.54■□□□□ 0.08
SNED1-201ENST00000310397 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.54■□□□□ 0.08
SNED1-201ENST00000310397 NSD3Q9BZ95 1437 aa15.54■□□□□ 0.08
SNED1-201ENST00000310397 TOPBP1Q92547 1522 aa15.54■□□□□ 0.08
SNED1-201ENST00000310397 KIF18AQ8NI77 898 aa15.53■□□□□ 0.08
SNED1-201ENST00000310397 PDRG1Q9NUG6 133 aa15.53■□□□□ 0.08
SNED1-201ENST00000310397 ITSN2Q9NZM3 1697 aa15.53■□□□□ 0.08
SNED1-201ENST00000310397 UBXN4Q92575 508 aa15.53■□□□□ 0.08
SNED1-201ENST00000310397 TSPYL1Q9H0U9 437 aa15.53■□□□□ 0.08
SNED1-201ENST00000310397 CCDC43Q96MW1 224 aaKnown RBP15.53■□□□□ 0.08
SNED1-201ENST00000310397 UPF3BQ9BZI7 483 aaKnown RBP15.53■□□□□ 0.08
SNED1-201ENST00000310397 NLRP6P59044 892 aa15.52■□□□□ 0.08
SNED1-201ENST00000310397 PRKCSHP14314 528 aaPredicted RBP15.52■□□□□ 0.08
SNED1-201ENST00000310397 PLEKHO1Q53GL0 409 aaPredicted RBP15.52■□□□□ 0.08
SNED1-201ENST00000310397 SLC3A2P08195 630 aaKnown RBP15.52■□□□□ 0.08
SNED1-201ENST00000310397 SCAND2PQ9GZW5 306 aaPredicted RBP15.52■□□□□ 0.08
SNED1-201ENST00000310397 DNAJC2Q99543 621 aaKnown RBP15.52■□□□□ 0.08
SNED1-201ENST00000310397 PRM3Q9NNZ6 103 aa15.52■□□□□ 0.08
SNED1-201ENST00000310397 PTPN14Q15678 1187 aa15.52■□□□□ 0.07
SNED1-201ENST00000310397 PRAM1Q96QH2 718 aa15.52■□□□□ 0.07
SNED1-201ENST00000310397 RPGRIP1LQ68CZ1 1315 aa15.52■□□□□ 0.07
SNED1-201ENST00000310397 DYNC1I1O14576 645 aa15.52■□□□□ 0.07
SNED1-201ENST00000310397 BIVM-ERCC5R4GMW8 1640 aa15.51■□□□□ 0.07
SNED1-201ENST00000310397 SULT6B1Q6IMI4 303 aa15.51■□□□□ 0.07
SNED1-201ENST00000310397 BRPF1P55201 1214 aaPredicted RBP15.51■□□□□ 0.07
SNED1-201ENST00000310397 NFE2L2Q16236 605 aa15.51■□□□□ 0.07
SNED1-201ENST00000310397 SH2B1Q9NRF2 756 aaPredicted RBP15.51■□□□□ 0.07
SNED1-201ENST00000310397 CCDC158Q5M9N0 1113 aa15.5■□□□□ 0.07
SNED1-201ENST00000310397 TNPO1Q92973 898 aaKnown RBP15.5■□□□□ 0.07
SNED1-201ENST00000310397 SLC52A1Q9NWF4 448 aa15.5■□□□□ 0.07
SNED1-201ENST00000310397 RAB11FIP3O75154 756 aa15.5■□□□□ 0.07
SNED1-201ENST00000310397 JAKMIP1Q96N16 626 aaKnown RBP15.5■□□□□ 0.07
SNED1-201ENST00000310397 GBP3Q9H0R5 595 aa15.5■□□□□ 0.07
SNED1-201ENST00000310397 CAMSAP2Q08AD1 1489 aa15.5■□□□□ 0.07
SNED1-201ENST00000310397 TBC1D32Q96NH3 1257 aa15.5■□□□□ 0.07
SNED1-201ENST00000310397 GOLGA6L7A0A1B0GV03 622 aa15.5■□□□□ 0.07
SNED1-201ENST00000310397 FAM135AQ9P2D6 1515 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms