RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 NGEFQ8N5V2 710 aa9.91□□□□□ -0.82
VPS41-202ENST00000310301 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.9□□□□□ -0.82
VPS41-202ENST00000310301 HSP90B2PQ58FF3 399 aa9.9□□□□□ -0.82
VPS41-202ENST00000310301 RUFY1Q96T51 708 aa9.9□□□□□ -0.82
VPS41-202ENST00000310301 TTC21AQ8NDW8 1320 aa9.9□□□□□ -0.82
VPS41-202ENST00000310301 POLD1P28340 1107 aa9.9□□□□□ -0.82
VPS41-202ENST00000310301 ADGRF5Q8IZF2 1346 aa9.9□□□□□ -0.82
VPS41-202ENST00000310301 KIF6Q6ZMV9 814 aa9.9□□□□□ -0.82
VPS41-202ENST00000310301 ARAP3Q8WWN8 1544 aa9.9□□□□□ -0.83
VPS41-202ENST00000310301 ARHGEF10O15013 1369 aa9.9□□□□□ -0.83
VPS41-202ENST00000310301 RDXP35241 583 aaKnown RBP9.89□□□□□ -0.83
VPS41-202ENST00000310301 ZNF530Q6P9A1 599 aaPredicted RBP9.89□□□□□ -0.83
VPS41-202ENST00000310301 H0YHG0 523 aa9.89□□□□□ -0.83
VPS41-202ENST00000310301 BCL2L13Q9BXK5 485 aa9.89□□□□□ -0.83
VPS41-202ENST00000310301 NINLQ9Y2I6 1382 aa9.89□□□□□ -0.83
VPS41-202ENST00000310301 USP21Q9UK80 565 aa9.89□□□□□ -0.83
VPS41-202ENST00000310301 RXRBP28702 533 aa9.89□□□□□ -0.83
VPS41-202ENST00000310301 TRPC5Q9UL62 973 aaPredicted RBP9.89□□□□□ -0.83
VPS41-202ENST00000310301 COG6Q9Y2V7 657 aa9.89□□□□□ -0.83
VPS41-202ENST00000310301 HECW2Q9P2P5 1572 aa9.88□□□□□ -0.83
VPS41-202ENST00000310301 BICD2Q8TD16 824 aa9.88□□□□□ -0.83
VPS41-202ENST00000310301 TMOD3Q9NYL9 352 aa9.88□□□□□ -0.83
VPS41-202ENST00000310301 MYBBP1AQ9BQG0 1328 aaKnown RBP9.88□□□□□ -0.83
VPS41-202ENST00000310301 CFAP43Q8NDM7 1665 aa9.88□□□□□ -0.83
VPS41-202ENST00000310301 IPO7O95373 1038 aaKnown RBP9.88□□□□□ -0.83
VPS41-202ENST00000310301 AMOTQ4VCS5 1084 aa9.88□□□□□ -0.83
VPS41-202ENST00000310301 DISP3Q9P2K9 1392 aa9.88□□□□□ -0.83
VPS41-202ENST00000310301 DDB1Q16531 1140 aa9.88□□□□□ -0.83
VPS41-202ENST00000310301 SASS6Q6UVJ0 657 aa9.88□□□□□ -0.83
VPS41-202ENST00000310301 PCMTD1Q96MG8 357 aaPredicted RBP9.88□□□□□ -0.83
VPS41-202ENST00000310301 TOMM22Q9NS69 142 aa9.88□□□□□ -0.83
VPS41-202ENST00000310301 MTHFSP49914 203 aa9.88□□□□□ -0.83
VPS41-202ENST00000310301 SMARCC1Q92922 1105 aaPredicted RBP9.88□□□□□ -0.83
VPS41-202ENST00000310301 NUCB2P80303 420 aa9.88□□□□□ -0.83
VPS41-202ENST00000310301 NBPF1Q3BBV0 1214 aa9.88□□□□□ -0.83
VPS41-202ENST00000310301 RRP7AQ9Y3A4 280 aaKnown RBP9.88□□□□□ -0.83
VPS41-202ENST00000310301 FBXW7Q969H0 707 aa9.87□□□□□ -0.83
VPS41-202ENST00000310301 TRPM2O94759 1503 aa9.87□□□□□ -0.83
VPS41-202ENST00000310301 NPATQ14207 1427 aa9.87□□□□□ -0.83
VPS41-202ENST00000310301 SLC12A5Q9H2X9 1139 aa9.87□□□□□ -0.83
VPS41-202ENST00000310301 KDM5DQ9BY66 1539 aa9.87□□□□□ -0.83
VPS41-202ENST00000310301 TRAK2O60296 914 aa9.87□□□□□ -0.83
VPS41-202ENST00000310301 STARD3NLO95772 234 aa9.87□□□□□ -0.83
VPS41-202ENST00000310301 TMEM94Q12767 1356 aa9.87□□□□□ -0.83
VPS41-202ENST00000310301 NOL10Q9BSC4 688 aaKnown RBP9.86□□□□□ -0.83
VPS41-202ENST00000310301 TCOF1Q13428 1488 aaKnown RBP9.86□□□□□ -0.83
VPS41-202ENST00000310301 CDR1P51861 262 aa9.86□□□□□ -0.83
VPS41-202ENST00000310301 ZKSCAN2Q63HK3 967 aa9.86□□□□□ -0.83
VPS41-202ENST00000310301 MARCH6O60337 910 aa9.86□□□□□ -0.83
VPS41-202ENST00000310301 RNF214Q8ND24 703 aa9.86□□□□□ -0.83
VPS41-202ENST00000310301 ZNF652Q9Y2D9 606 aa9.86□□□□□ -0.83
VPS41-202ENST00000310301 UGGT1Q9NYU2 1555 aa9.86□□□□□ -0.83
VPS41-202ENST00000310301 SCAF11Q99590 1463 aaKnown RBP9.86□□□□□ -0.83
VPS41-202ENST00000310301 REC8O95072 547 aa9.86□□□□□ -0.83
VPS41-202ENST00000310301 STK32BQ9NY57 414 aa9.86□□□□□ -0.83
VPS41-202ENST00000310301 ZPR1O75312 459 aa9.85□□□□□ -0.83
VPS41-202ENST00000310301 CCDC191Q8NCU4 936 aa9.85□□□□□ -0.83
VPS41-202ENST00000310301 EIF2S2P20042 333 aaKnown RBP9.85□□□□□ -0.83
VPS41-202ENST00000310301 ACEP12821 1306 aa9.85□□□□□ -0.83
VPS41-202ENST00000310301 RRP9O43818 475 aaKnown RBP9.85□□□□□ -0.83
VPS41-202ENST00000310301 CCDC173Q0VFZ6 552 aa9.85□□□□□ -0.83
VPS41-202ENST00000310301 CHMP4CQ96CF2 233 aa9.85□□□□□ -0.83
VPS41-202ENST00000310301 C22orf23Q9BZE7 217 aa9.85□□□□□ -0.83
VPS41-202ENST00000310301 TSPYL4Q9UJ04 414 aa9.85□□□□□ -0.83
VPS41-202ENST00000310301 PIK3R4Q99570 1358 aa9.85□□□□□ -0.83
VPS41-202ENST00000310301 E9PSI1 815 aa9.84□□□□□ -0.83
VPS41-202ENST00000310301 LEKR1Q6ZMV7 388 aa9.84□□□□□ -0.83
VPS41-202ENST00000310301 ANKRD20A12PQ8NF67 263 aa9.84□□□□□ -0.83
VPS41-202ENST00000310301 ZNF335Q9H4Z2 1342 aaPredicted RBP9.84□□□□□ -0.83
VPS41-202ENST00000310301 GLI2P10070 1586 aa9.84□□□□□ -0.83
VPS41-202ENST00000310301 PRKRIP1Q9H875 184 aaPredicted RBP9.84□□□□□ -0.83
VPS41-202ENST00000310301 ANO2Q9NQ90 1003 aa9.84□□□□□ -0.83
VPS41-202ENST00000310301 ADCY10Q96PN6 1610 aa9.84□□□□□ -0.83
VPS41-202ENST00000310301 PLEKHG1Q9ULL1 1385 aa9.84□□□□□ -0.83
VPS41-202ENST00000310301 GNAI1P63096 354 aa9.84□□□□□ -0.83
VPS41-202ENST00000310301 HSP90AB3PQ58FF7 597 aa9.84□□□□□ -0.83
VPS41-202ENST00000310301 VPS37CA5D8V6 355 aaPredicted RBP9.83□□□□□ -0.84
VPS41-202ENST00000310301 HMGN5P82970 282 aaKnown RBP9.83□□□□□ -0.84
VPS41-202ENST00000310301 WWC1Q8IX03 1113 aa9.83□□□□□ -0.84
VPS41-202ENST00000310301 VPS53Q5VIR6 699 aa9.83□□□□□ -0.84
VPS41-202ENST00000310301 TEX13AQ9BXU3 409 aaPredicted RBP9.83□□□□□ -0.84
VPS41-202ENST00000310301 FBXO3Q9UK99 471 aa9.83□□□□□ -0.84
VPS41-202ENST00000310301 CAVIN1Q6NZI2 390 aaKnown RBP9.83□□□□□ -0.84
VPS41-202ENST00000310301 VPS37DQ86XT2 251 aa9.83□□□□□ -0.84
VPS41-202ENST00000310301 SIRT1Q96EB6 747 aa9.83□□□□□ -0.84
VPS41-202ENST00000310301 PLCD4Q9BRC7 762 aa9.83□□□□□ -0.84
VPS41-202ENST00000310301 ABCC1P33527 1531 aa9.83□□□□□ -0.84
VPS41-202ENST00000310301 ERCC4Q92889 916 aaPredicted RBP9.82□□□□□ -0.84
VPS41-202ENST00000310301 SMC3Q9UQE7 1217 aa9.82□□□□□ -0.84
VPS41-202ENST00000310301 ARHGEF5Q12774 1597 aa9.82□□□□□ -0.84
VPS41-202ENST00000310301 EFCAB6Q5THR3 1501 aa9.82□□□□□ -0.84
VPS41-202ENST00000310301 A2ML1A8K2U0 1454 aa9.82□□□□□ -0.84
VPS41-202ENST00000310301 A0A087WZG4 1122 aa9.82□□□□□ -0.84
VPS41-202ENST00000310301 MAPK8IP2Q13387 824 aaPredicted RBP9.82□□□□□ -0.84
VPS41-202ENST00000310301 TRIM34Q9BYJ4 488 aa9.82□□□□□ -0.84
VPS41-202ENST00000310301 QTRT2Q9H974 415 aaKnown RBP9.82□□□□□ -0.84
VPS41-202ENST00000310301 AKAP17AQ02040 695 aaKnown RBP9.82□□□□□ -0.84
VPS41-202ENST00000310301 DCTN1Q14203 1278 aa9.82□□□□□ -0.84
VPS41-202ENST00000310301 FBXO41Q8TF61 875 aa9.82□□□□□ -0.84
VPS41-202ENST00000310301 UQCRHLA0A096LP55 91 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms