RNA–Protein interactions for RNA: ENST00000309041.11

CEP290-201, Transcript of centrosomal protein 290, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CEP290, Length 7,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-201ENST00000309041 TCF7L1Q9HCS4 588 aa1.73□□□□□ -2.13
CEP290-201ENST00000309041 TTC14Q96N46 770 aa1.72□□□□□ -2.13
CEP290-201ENST00000309041 CASP2P42575 452 aa1.72□□□□□ -2.13
CEP290-201ENST00000309041 SPOUT1Q5T280 376 aaKnown RBP1.72□□□□□ -2.13
CEP290-201ENST00000309041 NFXL1Q6ZNB6 911 aa1.72□□□□□ -2.13
CEP290-201ENST00000309041 PPHLN1Q8NEY8 458 aaKnown RBP1.72□□□□□ -2.13
CEP290-201ENST00000309041 ANO2Q9NQ90 1003 aa1.72□□□□□ -2.13
CEP290-201ENST00000309041 WDR70Q9NW82 654 aa1.72□□□□□ -2.13
CEP290-201ENST00000309041 LEF1Q9UJU2 399 aaPredicted RBP1.72□□□□□ -2.13
CEP290-201ENST00000309041 ATAD2BQ9ULI0 1458 aa1.72□□□□□ -2.13
CEP290-201ENST00000309041 TMEM131LA2VDJ0 1609 aa1.72□□□□□ -2.13
CEP290-201ENST00000309041 PRC1O43663 620 aa1.72□□□□□ -2.13
CEP290-201ENST00000309041 ANO6Q4KMQ2 910 aa1.72□□□□□ -2.13
CEP290-201ENST00000309041 CCDC174Q6PII3 467 aa1.72□□□□□ -2.13
CEP290-201ENST00000309041 NOP9Q86U38 636 aaKnown RBP1.72□□□□□ -2.13
CEP290-201ENST00000309041 COX4I2Q96KJ9 171 aa1.72□□□□□ -2.13
CEP290-201ENST00000309041 ZNF830Q96NB3 372 aaPredicted RBP1.72□□□□□ -2.13
CEP290-201ENST00000309041 PCSK7Q16549 785 aa1.72□□□□□ -2.13
CEP290-201ENST00000309041 NKD1Q969G9 470 aa1.72□□□□□ -2.13
CEP290-201ENST00000309041 PRR13Q9NZ81 148 aa1.72□□□□□ -2.13
CEP290-201ENST00000309041 ABCA5Q8WWZ7 1642 aa1.72□□□□□ -2.13
CEP290-201ENST00000309041 FAM205CA6NFA0 338 aa1.72□□□□□ -2.13
CEP290-201ENST00000309041 KRT38O76015 456 aa1.72□□□□□ -2.13
CEP290-201ENST00000309041 NAT2P11245 290 aa1.72□□□□□ -2.13
CEP290-201ENST00000309041 NFKBIAP25963 317 aa1.72□□□□□ -2.13
CEP290-201ENST00000309041 WDR44Q5JSH3 913 aa1.72□□□□□ -2.13
CEP290-201ENST00000309041 KLHL34Q8N239 644 aa1.72□□□□□ -2.13
CEP290-201ENST00000309041 FAM26DQ5JW98 314 aa1.72□□□□□ -2.13
CEP290-201ENST00000309041 TMC6Q7Z403 805 aa1.72□□□□□ -2.13
CEP290-201ENST00000309041 RASSF1Q9NS23 344 aa1.72□□□□□ -2.13
CEP290-201ENST00000309041 CASZ1Q86V15 1759 aa1.71□□□□□ -2.14
CEP290-201ENST00000309041 KIF1CO43896 1103 aaKnown RBP1.71□□□□□ -2.14
CEP290-201ENST00000309041 ALKBH2Q6NS38 261 aa1.71□□□□□ -2.14
CEP290-201ENST00000309041 CCDC8Q9H0W5 538 aaPredicted RBP1.71□□□□□ -2.14
CEP290-201ENST00000309041 SPDYE4A6NLX3 237 aa1.71□□□□□ -2.14
CEP290-201ENST00000309041 POU3F3P20264 500 aaPredicted RBP1.71□□□□□ -2.14
CEP290-201ENST00000309041 ARID4AP29374 1257 aaPredicted RBP1.71□□□□□ -2.14
CEP290-201ENST00000309041 DUSP27Q5VZP5 1158 aa1.71□□□□□ -2.14
CEP290-201ENST00000309041 PPP4R3AQ6IN85 833 aa1.71□□□□□ -2.14
CEP290-201ENST00000309041 CCDC116Q8IYX3 515 aa1.71□□□□□ -2.14
CEP290-201ENST00000309041 SRA1Q9HD15 236 aaKnown RBP1.71□□□□□ -2.14
CEP290-201ENST00000309041 SYNRGQ9UMZ2 1314 aa1.71□□□□□ -2.14
CEP290-201ENST00000309041 ERICH4A6NGS2 130 aa1.71□□□□□ -2.14
CEP290-201ENST00000309041 GTF2A1P52655 376 aaPredicted RBP1.71□□□□□ -2.14
CEP290-201ENST00000309041 EIF2AQ9BY44 585 aaKnown RBP1.71□□□□□ -2.14
CEP290-201ENST00000309041 ALG13Q9NP73 1137 aaKnown RBP1.71□□□□□ -2.14
CEP290-201ENST00000309041 METTL5Q9NRN9 209 aaKnown RBP1.71□□□□□ -2.14
CEP290-201ENST00000309041 PLSCR2Q9NRY7 297 aa1.71□□□□□ -2.14
CEP290-201ENST00000309041 LOC101059915A0A1B0GWI6 518 aaPredicted RBP1.71□□□□□ -2.14
CEP290-201ENST00000309041 TRIM6-TRIM34B2RNG4 842 aa1.71□□□□□ -2.14
CEP290-201ENST00000309041 C9IYK1 514 aa1.71□□□□□ -2.14
CEP290-201ENST00000309041 RGL2O15211 777 aa1.71□□□□□ -2.14
CEP290-201ENST00000309041 ELOAQ14241 798 aaKnown RBP1.71□□□□□ -2.14
CEP290-201ENST00000309041 RNF20Q5VTR2 975 aa1.71□□□□□ -2.14
CEP290-201ENST00000309041 DESI1Q6ICB0 168 aa1.71□□□□□ -2.14
CEP290-201ENST00000309041 HAUS7Q99871 368 aa1.71□□□□□ -2.14
CEP290-201ENST00000309041 TRIM34Q9BYJ4 488 aa1.71□□□□□ -2.14
CEP290-201ENST00000309041 RNPEPQ9H4A4 650 aa1.71□□□□□ -2.14
CEP290-201ENST00000309041 PHF8Q9UPP1 1060 aa1.71□□□□□ -2.14
CEP290-201ENST00000309041 GLI2P10070 1586 aa1.71□□□□□ -2.14
CEP290-201ENST00000309041 INPP5BP32019 993 aa1.71□□□□□ -2.14
CEP290-201ENST00000309041 ANP32AP39687 249 aaKnown RBP1.71□□□□□ -2.14
CEP290-201ENST00000309041 SETQ01105 290 aaPredicted RBP1.71□□□□□ -2.14
CEP290-201ENST00000309041 ZFYVE27Q5T4F4 411 aa1.71□□□□□ -2.14
CEP290-201ENST00000309041 MAML2Q8IZL2 1156 aaPredicted RBP1.71□□□□□ -2.14
CEP290-201ENST00000309041 RSAD2Q8WXG1 361 aa1.71□□□□□ -2.14
CEP290-201ENST00000309041 SPATA17Q96L03 361 aa1.71□□□□□ -2.14
CEP290-201ENST00000309041 AATKQ6ZMQ8 1374 aa1.71□□□□□ -2.14
CEP290-201ENST00000309041 BIVM-ERCC5R4GMW8 1640 aa1.71□□□□□ -2.14
CEP290-201ENST00000309041 TFPTP0C1Z6 253 aa1.71□□□□□ -2.14
CEP290-201ENST00000309041 NAA30Q147X3 362 aaPredicted RBP1.71□□□□□ -2.14
CEP290-201ENST00000309041 FMNL3Q8IVF7 1028 aa1.71□□□□□ -2.14
CEP290-201ENST00000309041 ZFP91Q96JP5 570 aaPredicted RBP1.71□□□□□ -2.14
CEP290-201ENST00000309041 PARD6BQ9BYG5 372 aa1.71□□□□□ -2.14
CEP290-201ENST00000309041 FAM135AQ9P2D6 1515 aa1.7□□□□□ -2.14
CEP290-201ENST00000309041 TMEM88BA6NKF7 163 aa1.7□□□□□ -2.14
CEP290-201ENST00000309041 MYO1FO00160 1098 aa1.7□□□□□ -2.14
CEP290-201ENST00000309041 XRCC5P13010 732 aaKnown RBP1.7□□□□□ -2.14
CEP290-201ENST00000309041 KRT76Q01546 638 aa1.7□□□□□ -2.14
CEP290-201ENST00000309041 CC2D1AQ6P1N0 951 aaPredicted RBP1.7□□□□□ -2.14
CEP290-201ENST00000309041 FAM180AQ6UWF9 173 aa1.7□□□□□ -2.14
CEP290-201ENST00000309041 ATRIPQ8WXE1 791 aa1.7□□□□□ -2.14
CEP290-201ENST00000309041 CCDC196A0A1B0GTZ2 297 aa1.7□□□□□ -2.14
CEP290-201ENST00000309041 BHMG1C9JSJ3 638 aaPredicted RBP1.7□□□□□ -2.14
CEP290-201ENST00000309041 FAM193AP78312 1265 aa1.7□□□□□ -2.14
CEP290-201ENST00000309041 LBRQ14739 615 aaKnown RBP1.7□□□□□ -2.14
CEP290-201ENST00000309041 HACE1Q8IYU2 909 aa1.7□□□□□ -2.14
CEP290-201ENST00000309041 LSM14BQ9BX40 385 aaKnown RBP1.7□□□□□ -2.14
CEP290-201ENST00000309041 CHMP4BQ9H444 224 aaKnown RBP1.7□□□□□ -2.14
CEP290-201ENST00000309041 REV1Q9UBZ9 1251 aa1.7□□□□□ -2.14
CEP290-201ENST00000309041 NME7Q9Y5B8 376 aa1.7□□□□□ -2.14
CEP290-201ENST00000309041 LAMC3Q9Y6N6 1575 aa1.7□□□□□ -2.14
CEP290-201ENST00000309041 GPTP24298 496 aa1.7□□□□□ -2.14
CEP290-201ENST00000309041 PTTG1IPP53801 180 aa1.7□□□□□ -2.14
CEP290-201ENST00000309041 NBPF8Q3BBV2 869 aa1.7□□□□□ -2.14
CEP290-201ENST00000309041 PRKAG2Q9UGJ0 569 aa1.7□□□□□ -2.14
CEP290-201ENST00000309041 MAP3K19Q56UN5 1328 aa1.7□□□□□ -2.14
CEP290-201ENST00000309041 PWP1Q13610 501 aa1.7□□□□□ -2.14
CEP290-201ENST00000309041 MAP7D1Q3KQU3 841 aa1.7□□□□□ -2.14
CEP290-201ENST00000309041 PRPF38BQ5VTL8 546 aaKnown RBP1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms