RNA–Protein interactions for RNA: ENST00000308961.4

NDUFA11-201, Transcript of NADH:ubiquinone oxidoreductase subunit A11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDUFA11, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA11-201ENST00000308961 PRDM11Q9NQV5 511 aa23■■□□□ 1.27
NDUFA11-201ENST00000308961 COL3A1P02461 1466 aaPredicted RBP22.99■■□□□ 1.27
NDUFA11-201ENST00000308961 CDK12Q9NYV4 1490 aaPredicted RBP22.99■■□□□ 1.27
NDUFA11-201ENST00000308961 COL18A1P39060 1754 aa22.99■■□□□ 1.27
NDUFA11-201ENST00000308961 SPATA31A6Q5VVP1 1343 aa22.99■■□□□ 1.27
NDUFA11-201ENST00000308961 FLT4P35916 1363 aa22.99■■□□□ 1.27
NDUFA11-201ENST00000308961 KIF24Q5T7B8 1368 aa22.98■■□□□ 1.27
NDUFA11-201ENST00000308961 LRP6O75581 1613 aa22.97■■□□□ 1.27
NDUFA11-201ENST00000308961 CFAP53Q96M91 514 aa22.97■■□□□ 1.27
NDUFA11-201ENST00000308961 RTL1A6NKG5 1358 aa22.97■■□□□ 1.27
NDUFA11-201ENST00000308961 IL13P35225 146 aa22.96■■□□□ 1.27
NDUFA11-201ENST00000308961 EIF4A2Q14240 407 aaKnown RBP22.96■■□□□ 1.27
NDUFA11-201ENST00000308961 PNISRQ8TF01 805 aaKnown RBP22.95■■□□□ 1.26
NDUFA11-201ENST00000308961 LTV1Q96GA3 475 aaPredicted RBP22.95■■□□□ 1.26
NDUFA11-201ENST00000308961 DIAPH1O60610 1272 aaKnown RBP22.94■■□□□ 1.26
NDUFA11-201ENST00000308961 RGPD5Q99666 1765 aa22.94■■□□□ 1.26
NDUFA11-201ENST00000308961 CAMTA1Q9Y6Y1 1673 aa22.93■■□□□ 1.26
NDUFA11-201ENST00000308961 LMO7Q8WWI1 1683 aa22.93■■□□□ 1.26
NDUFA11-201ENST00000308961 ANKRD24Q8TF21 1146 aa22.91■■□□□ 1.26
NDUFA11-201ENST00000308961 BLMP54132 1417 aaPredicted RBP22.91■■□□□ 1.26
NDUFA11-201ENST00000308961 COL14A1Q05707 1796 aaKnown RBP22.89■■□□□ 1.26
NDUFA11-201ENST00000308961 BTG4Q9NY30 223 aa22.89■■□□□ 1.25
NDUFA11-201ENST00000308961 ABCC6O95255 1503 aa22.88■■□□□ 1.25
NDUFA11-201ENST00000308961 ERBB3P21860 1342 aa22.87■■□□□ 1.25
NDUFA11-201ENST00000308961 U2SURPO15042 1029 aaKnown RBP22.87■■□□□ 1.25
NDUFA11-201ENST00000308961 FAM9BQ8IZU0 186 aa22.87■■□□□ 1.25
NDUFA11-201ENST00000308961 C8orf37Q96NL8 207 aa22.87■■□□□ 1.25
NDUFA11-201ENST00000308961 EYA1Q99502 592 aa22.87■■□□□ 1.25
NDUFA11-201ENST00000308961 ADAMTS8Q9UP79 889 aa22.87■■□□□ 1.25
NDUFA11-201ENST00000308961 NBPF6Q5VWK0 638 aa22.86■■□□□ 1.25
NDUFA11-201ENST00000308961 NBPF4Q96M43 638 aa22.86■■□□□ 1.25
NDUFA11-201ENST00000308961 NUDCQ9Y266 331 aa22.86■■□□□ 1.25
NDUFA11-201ENST00000308961 COL5A2P05997 1499 aaPredicted RBP22.85■■□□□ 1.25
NDUFA11-201ENST00000308961 NGLY1Q96IV0 654 aa22.85■■□□□ 1.25
NDUFA11-201ENST00000308961 STRN4Q9NRL3 753 aa22.85■■□□□ 1.25
NDUFA11-201ENST00000308961 SLIT2O94813 1529 aa22.84■■□□□ 1.25
NDUFA11-201ENST00000308961 U2AF1L5P0DN76 240 aaPredicted RBP22.84■■□□□ 1.25
NDUFA11-201ENST00000308961 U2AF1Q01081 240 aaKnown RBP eCLIP22.84■■□□□ 1.25
NDUFA11-201ENST00000308961 MEX3CQ5U5Q3 659 aaKnown RBP22.84■■□□□ 1.25
NDUFA11-201ENST00000308961 ILDR1Q86SU0 546 aaPredicted RBP22.84■■□□□ 1.25
NDUFA11-201ENST00000308961 EVA1CP58658 441 aa22.83■■□□□ 1.25
NDUFA11-201ENST00000308961 WDR43Q15061 677 aaKnown RBP eCLIP22.83■■□□□ 1.25
NDUFA11-201ENST00000308961 LARP1Q6PKG0 1096 aaKnown RBP22.83■■□□□ 1.25
NDUFA11-201ENST00000308961 AEBP1Q8IUX7 1158 aa22.83■■□□□ 1.25
NDUFA11-201ENST00000308961 USHBP1Q8N6Y0 703 aa22.83■■□□□ 1.25
NDUFA11-201ENST00000308961 PLCH1Q4KWH8 1693 aa22.83■■□□□ 1.24
NDUFA11-201ENST00000308961 RGPD2P0DJD1 1756 aa22.82■■□□□ 1.24
NDUFA11-201ENST00000308961 HMOX1P09601 288 aa22.82■■□□□ 1.24
NDUFA11-201ENST00000308961 CSB-PGBD3P0DP91 1061 aa22.82■■□□□ 1.24
NDUFA11-201ENST00000308961 FNBP4Q8N3X1 1017 aaPredicted RBP22.82■■□□□ 1.24
NDUFA11-201ENST00000308961 RGPD1P0DJD0 1748 aa22.82■■□□□ 1.24
NDUFA11-201ENST00000308961 WDR17Q8IZU2 1322 aa22.82■■□□□ 1.24
NDUFA11-201ENST00000308961 IGSF1Q8N6C5 1336 aa22.82■■□□□ 1.24
NDUFA11-201ENST00000308961 NLRP2Q9NX02 1062 aa22.81■■□□□ 1.24
NDUFA11-201ENST00000308961 BCL9LQ86UU0 1499 aa22.8■■□□□ 1.24
NDUFA11-201ENST00000308961 SULT6B1Q6IMI4 303 aa22.8■■□□□ 1.24
NDUFA11-201ENST00000308961 NRAPQ86VF7 1730 aa22.79■■□□□ 1.24
NDUFA11-201ENST00000308961 TOM1L2Q6ZVM7 507 aa22.78■■□□□ 1.24
NDUFA11-201ENST00000308961 UNC5CLQ8IV45 518 aa22.78■■□□□ 1.24
NDUFA11-201ENST00000308961 RSPH6AQ9H0K4 717 aa22.78■■□□□ 1.24
NDUFA11-201ENST00000308961 CCDC146Q8IYE0 955 aa22.77■■□□□ 1.24
NDUFA11-201ENST00000308961 AFF2P51816 1311 aa22.77■■□□□ 1.24
NDUFA11-201ENST00000308961 NWD2Q9ULI1 1742 aa22.77■■□□□ 1.23
NDUFA11-201ENST00000308961 NCAPD2Q15021 1401 aa22.76■■□□□ 1.23
NDUFA11-201ENST00000308961 USP21Q9UK80 565 aa22.76■■□□□ 1.23
NDUFA11-201ENST00000308961 FCHSD2O94868 740 aa22.75■■□□□ 1.23
NDUFA11-201ENST00000308961 PLEKHF1Q96S99 279 aa22.75■■□□□ 1.23
NDUFA11-201ENST00000308961 CARD10Q9BWT7 1032 aa22.75■■□□□ 1.23
NDUFA11-201ENST00000308961 PRKAR2BP31323 418 aa22.74■■□□□ 1.23
NDUFA11-201ENST00000308961 KDRP35968 1356 aa22.74■■□□□ 1.23
NDUFA11-201ENST00000308961 CRB1P82279 1406 aa22.74■■□□□ 1.23
NDUFA11-201ENST00000308961 SENP3-EIF4A1A0A087X0R7 540 aa22.73■■□□□ 1.23
NDUFA11-201ENST00000308961 FAM208AQ9UK61 1670 aaKnown RBP22.73■■□□□ 1.23
NDUFA11-201ENST00000308961 PHACTR3Q96KR7 559 aa22.72■■□□□ 1.23
NDUFA11-201ENST00000308961 USP35Q9P2H5 1018 aa22.72■■□□□ 1.23
NDUFA11-201ENST00000308961 VPS72Q15906 364 aa22.71■■□□□ 1.23
NDUFA11-201ENST00000308961 RUNDC1Q96C34 613 aa22.7■■□□□ 1.22
NDUFA11-201ENST00000308961 SPATA31A1Q5TZJ5 1347 aa22.7■■□□□ 1.22
NDUFA11-201ENST00000308961 SPATA31A5Q5VU36 1347 aa22.7■■□□□ 1.22
NDUFA11-201ENST00000308961 SPATA31A7Q8IWB4 1347 aa22.7■■□□□ 1.22
NDUFA11-201ENST00000308961 CCDC9Q9Y3X0 531 aaKnown RBP22.68■■□□□ 1.22
NDUFA11-201ENST00000308961 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.67■■□□□ 1.22
NDUFA11-201ENST00000308961 MEGF6O75095 1541 aa22.67■■□□□ 1.22
NDUFA11-201ENST00000308961 APAF1O14727 1248 aa22.66■■□□□ 1.22
NDUFA11-201ENST00000308961 TCP11L2Q8N4U5 519 aa22.66■■□□□ 1.22
NDUFA11-201ENST00000308961 ATRNO75882 1429 aa22.65■■□□□ 1.22
NDUFA11-201ENST00000308961 PNNQ9H307 717 aaKnown RBP22.65■■□□□ 1.22
NDUFA11-201ENST00000308961 QTRT2Q9H974 415 aaKnown RBP22.65■■□□□ 1.22
NDUFA11-201ENST00000308961 RGS17Q9UGC6 210 aaPredicted RBP22.65■■□□□ 1.22
NDUFA11-201ENST00000308961 TATP17735 454 aaPredicted RBP22.64■■□□□ 1.21
NDUFA11-201ENST00000308961 RAPGEF4Q8WZA2 1011 aa22.64■■□□□ 1.21
NDUFA11-201ENST00000308961 IL2RBP14784 551 aa22.63■■□□□ 1.21
NDUFA11-201ENST00000308961 MTHFSDQ2M296 383 aaKnown RBP22.63■■□□□ 1.21
NDUFA11-201ENST00000308961 TRPC5Q9UL62 973 aaPredicted RBP22.63■■□□□ 1.21
NDUFA11-201ENST00000308961 RRP7AQ9Y3A4 280 aaKnown RBP22.63■■□□□ 1.21
NDUFA11-201ENST00000308961 DISP2A7MBM2 1401 aa22.63■■□□□ 1.21
NDUFA11-201ENST00000308961 MAPK8IP3Q9UPT6 1336 aa22.62■■□□□ 1.21
NDUFA11-201ENST00000308961 GJD4Q96KN9 370 aaPredicted RBP22.62■■□□□ 1.21
NDUFA11-201ENST00000308961 TMPOP42166 694 aaKnown RBP22.61■■□□□ 1.21
NDUFA11-201ENST00000308961 THRAP3Q9Y2W1 955 aaKnown RBP22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms