RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.84□□□□□ -0.35
MSRB3-201ENST00000308259 ELL2O00472 640 aaPredicted RBP12.84□□□□□ -0.35
MSRB3-201ENST00000308259 ZBTB9Q96C00 473 aa12.84□□□□□ -0.35
MSRB3-201ENST00000308259 SKOR2Q2VWA4 1001 aaPredicted RBP12.84□□□□□ -0.35
MSRB3-201ENST00000308259 TSC1Q92574 1164 aa12.84□□□□□ -0.35
MSRB3-201ENST00000308259 ISY1Q9ULR0 285 aaKnown RBP12.84□□□□□ -0.35
MSRB3-201ENST00000308259 THUMPD2Q9BTF0 503 aaKnown RBP12.83□□□□□ -0.35
MSRB3-201ENST00000308259 MYOM2P54296 1465 aa12.83□□□□□ -0.36
MSRB3-201ENST00000308259 FAM193AP78312 1265 aa12.83□□□□□ -0.36
MSRB3-201ENST00000308259 UTP14CQ5TAP6 766 aaKnown RBP12.83□□□□□ -0.36
MSRB3-201ENST00000308259 LMOD2Q6P5Q4 547 aa12.83□□□□□ -0.36
MSRB3-201ENST00000308259 PDCL2Q8N4E4 241 aa12.83□□□□□ -0.36
MSRB3-201ENST00000308259 MROH1Q8NDA8 1641 aa12.83□□□□□ -0.36
MSRB3-201ENST00000308259 PPRC1Q5VV67 1664 aaKnown RBP12.83□□□□□ -0.36
MSRB3-201ENST00000308259 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.82□□□□□ -0.36
MSRB3-201ENST00000308259 TRIM6-TRIM34B2RNG4 842 aa12.82□□□□□ -0.36
MSRB3-201ENST00000308259 RNF214Q8ND24 703 aa12.82□□□□□ -0.36
MSRB3-201ENST00000308259 TRIM34Q9BYJ4 488 aa12.82□□□□□ -0.36
MSRB3-201ENST00000308259 TMPOP42166 694 aaKnown RBP12.82□□□□□ -0.36
MSRB3-201ENST00000308259 TBC1D32Q96NH3 1257 aa12.82□□□□□ -0.36
MSRB3-201ENST00000308259 PHF23Q9BUL5 403 aaPredicted RBP12.82□□□□□ -0.36
MSRB3-201ENST00000308259 DEPDC5O75140 1603 aa12.82□□□□□ -0.36
MSRB3-201ENST00000308259 IDI1Q13907 227 aa12.82□□□□□ -0.36
MSRB3-201ENST00000308259 C1orf115Q9H7X2 142 aa12.82□□□□□ -0.36
MSRB3-201ENST00000308259 TMEM57Q8N5G2 664 aa12.82□□□□□ -0.36
MSRB3-201ENST00000308259 NGEFQ8N5V2 710 aa12.82□□□□□ -0.36
MSRB3-201ENST00000308259 TMEM51Q9NW97 253 aa12.82□□□□□ -0.36
MSRB3-201ENST00000308259 TRIM35Q9UPQ4 493 aa12.81□□□□□ -0.36
MSRB3-201ENST00000308259 EFCAB6Q5THR3 1501 aa12.81□□□□□ -0.36
MSRB3-201ENST00000308259 PRAM1Q96QH2 718 aa12.81□□□□□ -0.36
MSRB3-201ENST00000308259 LNPKQ9C0E8 428 aa12.81□□□□□ -0.36
MSRB3-201ENST00000308259 TERF2IPQ9NYB0 399 aa12.81□□□□□ -0.36
MSRB3-201ENST00000308259 INO80Q9ULG1 1556 aaPredicted RBP12.81□□□□□ -0.36
MSRB3-201ENST00000308259 DNAJC2Q99543 621 aaKnown RBP12.81□□□□□ -0.36
MSRB3-201ENST00000308259 VWDEQ8N2E2 1590 aa12.81□□□□□ -0.36
MSRB3-201ENST00000308259 HMOX1P09601 288 aa12.8□□□□□ -0.36
MSRB3-201ENST00000308259 KIF1BO60333 1816 aa12.8□□□□□ -0.36
MSRB3-201ENST00000308259 HSP90B1P14625 803 aaKnown RBP12.8□□□□□ -0.36
MSRB3-201ENST00000308259 CFAP44Q96MT7 982 aa12.8□□□□□ -0.36
MSRB3-201ENST00000308259 CCDC9Q9Y3X0 531 aaKnown RBP12.8□□□□□ -0.36
MSRB3-201ENST00000308259 A0A1W2PP64 1363 aa12.8□□□□□ -0.36
MSRB3-201ENST00000308259 C22orf23Q9BZE7 217 aa12.79□□□□□ -0.36
MSRB3-201ENST00000308259 NLRP1Q9C000 1473 aa12.79□□□□□ -0.36
MSRB3-201ENST00000308259 SHPRHQ149N8 1683 aa12.79□□□□□ -0.36
MSRB3-201ENST00000308259 FSD2A1L4K1 749 aa12.79□□□□□ -0.36
MSRB3-201ENST00000308259 FYB1O15117 783 aa12.79□□□□□ -0.36
MSRB3-201ENST00000308259 IQSEC2Q5JU85 1478 aa12.79□□□□□ -0.36
MSRB3-201ENST00000308259 ANTXR1Q9H6X2 564 aa12.78□□□□□ -0.36
MSRB3-201ENST00000308259 SBNO2Q9Y2G9 1366 aa12.78□□□□□ -0.36
MSRB3-201ENST00000308259 NINLQ9Y2I6 1382 aa12.78□□□□□ -0.36
MSRB3-201ENST00000308259 CAVIN1Q6NZI2 390 aaKnown RBP12.78□□□□□ -0.36
MSRB3-201ENST00000308259 KIF3AQ9Y496 699 aa12.78□□□□□ -0.36
MSRB3-201ENST00000308259 FBXO31Q5XUX0 539 aaPredicted RBP12.78□□□□□ -0.36
MSRB3-201ENST00000308259 ATF7IPQ6VMQ6 1270 aa12.78□□□□□ -0.36
MSRB3-201ENST00000308259 CABP1Q9NZU7 370 aa12.78□□□□□ -0.36
MSRB3-201ENST00000308259 HDAC5Q9UQL6 1122 aa12.78□□□□□ -0.36
MSRB3-201ENST00000308259 PLEKHF1Q96S99 279 aa12.77□□□□□ -0.36
MSRB3-201ENST00000308259 ANKRD36BQ8N2N9 1353 aa12.77□□□□□ -0.36
MSRB3-201ENST00000308259 HMGN5P82970 282 aaKnown RBP12.77□□□□□ -0.37
MSRB3-201ENST00000308259 RBM25P49756 843 aaKnown RBP12.77□□□□□ -0.37
MSRB3-201ENST00000308259 QRICH2Q9H0J4 1663 aa12.76□□□□□ -0.37
MSRB3-201ENST00000308259 TNNT1P13805 278 aa12.76□□□□□ -0.37
MSRB3-201ENST00000308259 CCDC27Q2M243 656 aa12.76□□□□□ -0.37
MSRB3-201ENST00000308259 TIGD1Q96MW7 591 aa12.76□□□□□ -0.37
MSRB3-201ENST00000308259 RIMBP3CA6NJZ7 1639 aa12.76□□□□□ -0.37
MSRB3-201ENST00000308259 RIMBP3BA6NNM3 1639 aa12.76□□□□□ -0.37
MSRB3-201ENST00000308259 RIMBP3Q9UFD9 1639 aa12.76□□□□□ -0.37
MSRB3-201ENST00000308259 NRXN1Q9ULB1 1477 aa12.76□□□□□ -0.37
MSRB3-201ENST00000308259 KIDINS220Q9ULH0 1771 aa12.76□□□□□ -0.37
MSRB3-201ENST00000308259 CCDC39Q9UFE4 941 aa12.76□□□□□ -0.37
MSRB3-201ENST00000308259 ABCA9Q8IUA7 1624 aa12.76□□□□□ -0.37
MSRB3-201ENST00000308259 NGDNQ8NEJ9 315 aaKnown RBP12.76□□□□□ -0.37
MSRB3-201ENST00000308259 TNRQ92752 1358 aa12.76□□□□□ -0.37
MSRB3-201ENST00000308259 KIAA1210Q9ULL0 1709 aa12.76□□□□□ -0.37
MSRB3-201ENST00000308259 ADGRB1O14514 1584 aa12.76□□□□□ -0.37
MSRB3-201ENST00000308259 WAPLQ7Z5K2 1190 aa12.76□□□□□ -0.37
MSRB3-201ENST00000308259 ADGRB3O60242 1522 aa12.76□□□□□ -0.37
MSRB3-201ENST00000308259 DIAPH1O60610 1272 aaKnown RBP12.75□□□□□ -0.37
MSRB3-201ENST00000308259 ZSCAN20P17040 1043 aaPredicted RBP12.75□□□□□ -0.37
MSRB3-201ENST00000308259 PRKAR2BP31323 418 aa12.75□□□□□ -0.37
MSRB3-201ENST00000308259 TULP4Q9NRJ4 1543 aa12.75□□□□□ -0.37
MSRB3-201ENST00000308259 ATF3P18847 181 aa12.74□□□□□ -0.37
MSRB3-201ENST00000308259 DDX19BQ9UMR2 479 aa12.74□□□□□ -0.37
MSRB3-201ENST00000308259 FOXD4L5Q5VV16 416 aaPredicted RBP12.74□□□□□ -0.37
MSRB3-201ENST00000308259 FOXD4L4Q8WXT5 416 aaPredicted RBP12.74□□□□□ -0.37
MSRB3-201ENST00000308259 PHACTR3Q96KR7 559 aa12.74□□□□□ -0.37
MSRB3-201ENST00000308259 ZRANB1Q9UGI0 708 aa12.74□□□□□ -0.37
MSRB3-201ENST00000308259 ARAP3Q8WWN8 1544 aa12.74□□□□□ -0.37
MSRB3-201ENST00000308259 CLGNO14967 610 aa12.74□□□□□ -0.37
MSRB3-201ENST00000308259 OS9Q13438 667 aaPredicted RBP12.74□□□□□ -0.37
MSRB3-201ENST00000308259 GPATCH11Q8N954 259 aa12.74□□□□□ -0.37
MSRB3-201ENST00000308259 CHMP4CQ96CF2 233 aa12.74□□□□□ -0.37
MSRB3-201ENST00000308259 CDK19Q9BWU1 502 aa12.74□□□□□ -0.37
MSRB3-201ENST00000308259 TSPYL6Q8N831 410 aa12.74□□□□□ -0.37
MSRB3-201ENST00000308259 ANKRD45Q5TZF3 282 aa12.73□□□□□ -0.37
MSRB3-201ENST00000308259 TEX2Q8IWB9 1127 aa12.73□□□□□ -0.37
MSRB3-201ENST00000308259 TERF1P54274 439 aa12.73□□□□□ -0.37
MSRB3-201ENST00000308259 GAS2L3Q86XJ1 694 aa12.73□□□□□ -0.37
MSRB3-201ENST00000308259 MCTP1Q6DN14 999 aa12.73□□□□□ -0.37
MSRB3-201ENST00000308259 BCCIPQ9P287 314 aaKnown RBP eCLIP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms