RNA–Protein interactions for RNA: ENST00000303296.8

HIPK3-201, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 5 BASIC

Gene HIPK3, Length 7,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-201ENST00000303296 STRN4Q9NRL3 753 aa16.76■□□□□ 0.27
HIPK3-201ENST00000303296 DZIP1LQ8IYY4 767 aaKnown RBP16.76■□□□□ 0.27
HIPK3-201ENST00000303296 UBA5Q9GZZ9 404 aa16.76■□□□□ 0.27
HIPK3-201ENST00000303296 FERP16591 822 aa16.75■□□□□ 0.27
HIPK3-201ENST00000303296 CTNNA2P26232 953 aa16.75■□□□□ 0.27
HIPK3-201ENST00000303296 TTLL12Q14166 644 aaPredicted RBP16.75■□□□□ 0.27
HIPK3-201ENST00000303296 TRMT1LQ7Z2T5 733 aaKnown RBP16.75■□□□□ 0.27
HIPK3-201ENST00000303296 TNMDQ9H2S6 317 aa16.75■□□□□ 0.27
HIPK3-201ENST00000303296 ZNF354CQ86Y25 554 aa16.75■□□□□ 0.27
HIPK3-201ENST00000303296 LARP1Q6PKG0 1096 aaKnown RBP16.75■□□□□ 0.27
HIPK3-201ENST00000303296 ANKRD18BA2A2Z9 1011 aa16.75■□□□□ 0.27
HIPK3-201ENST00000303296 DHX8Q14562 1220 aaKnown RBP16.75■□□□□ 0.27
HIPK3-201ENST00000303296 GNL3LQ9NVN8 582 aaKnown RBP16.75■□□□□ 0.27
HIPK3-201ENST00000303296 TRIM22Q8IYM9 498 aa16.74■□□□□ 0.27
HIPK3-201ENST00000303296 FEZ1Q99689 392 aa16.74■□□□□ 0.27
HIPK3-201ENST00000303296 NUTM2BA6NNL0 878 aaPredicted RBP16.74■□□□□ 0.27
HIPK3-201ENST00000303296 NUTM2EB1AL46 878 aaPredicted RBP16.74■□□□□ 0.27
HIPK3-201ENST00000303296 NUTM2AQ8IVF1 878 aaPredicted RBP16.74■□□□□ 0.27
HIPK3-201ENST00000303296 FERMT2Q96AC1 680 aa16.74■□□□□ 0.27
HIPK3-201ENST00000303296 SIL1Q9H173 461 aa16.73■□□□□ 0.27
HIPK3-201ENST00000303296 TMX1Q9H3N1 280 aa16.73■□□□□ 0.27
HIPK3-201ENST00000303296 PKNOX2Q96KN3 472 aa16.73■□□□□ 0.27
HIPK3-201ENST00000303296 HNRNPMP52272 730 aaKnown RBP eCLIP16.73■□□□□ 0.279e-6■■■■□ 22.2
HIPK3-201ENST00000303296 CCDC158Q5M9N0 1113 aa16.73■□□□□ 0.27
HIPK3-201ENST00000303296 API5Q9BZZ5 524 aaKnown RBP16.73■□□□□ 0.27
HIPK3-201ENST00000303296 PPP4R3AQ6IN85 833 aa16.73■□□□□ 0.27
HIPK3-201ENST00000303296 RGS22Q8NE09 1264 aa16.73■□□□□ 0.27
HIPK3-201ENST00000303296 MPHOSPH9Q99550 1183 aa16.73■□□□□ 0.27
HIPK3-201ENST00000303296 CCDC160A6NGH7 325 aa16.72■□□□□ 0.27
HIPK3-201ENST00000303296 APAF1O14727 1248 aa16.72■□□□□ 0.27
HIPK3-201ENST00000303296 DIAPH1O60610 1272 aaKnown RBP16.72■□□□□ 0.27
HIPK3-201ENST00000303296 ZNF397Q8NF99 534 aaPredicted RBP16.72■□□□□ 0.27
HIPK3-201ENST00000303296 SRRTQ9BXP5 876 aaKnown RBP16.72■□□□□ 0.27
HIPK3-201ENST00000303296 CCDC148Q8NFR7 591 aa16.72■□□□□ 0.27
HIPK3-201ENST00000303296 CRACR2AQ9BSW2 395 aa16.72■□□□□ 0.27
HIPK3-201ENST00000303296 KIF7Q2M1P5 1343 aa16.72■□□□□ 0.27
HIPK3-201ENST00000303296 RRP1P56182 461 aaKnown RBP16.72■□□□□ 0.27
HIPK3-201ENST00000303296 PDE3BQ13370 1112 aa16.71■□□□□ 0.27
HIPK3-201ENST00000303296 JMYQ8N9B5 988 aa16.71■□□□□ 0.27
HIPK3-201ENST00000303296 SHTN1A0MZ66 631 aa16.71■□□□□ 0.27
HIPK3-201ENST00000303296 NEK4P51957 841 aa16.71■□□□□ 0.27
HIPK3-201ENST00000303296 SURF6O75683 361 aaKnown RBP16.71■□□□□ 0.27
HIPK3-201ENST00000303296 CEP57L1Q8IYX8 460 aa16.71■□□□□ 0.27
HIPK3-201ENST00000303296 LMAN1P49257 510 aa16.71■□□□□ 0.27
HIPK3-201ENST00000303296 RAB3IL1Q8TBN0 382 aa16.71■□□□□ 0.27
HIPK3-201ENST00000303296 CCDC150Q8NCX0 1101 aa16.7■□□□□ 0.26
HIPK3-201ENST00000303296 FKBP4Q02790 459 aaKnown RBP eCLIP16.7■□□□□ 0.26
HIPK3-201ENST00000303296 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.7■□□□□ 0.26
HIPK3-201ENST00000303296 RAI14Q9P0K7 980 aa16.7■□□□□ 0.26
HIPK3-201ENST00000303296 NOL7Q9UMY1 257 aaKnown RBP16.7■□□□□ 0.26
HIPK3-201ENST00000303296 CCDC57Q2TAC2 916 aa16.69■□□□□ 0.26
HIPK3-201ENST00000303296 DZIP1Q86YF9 867 aaKnown RBP16.69■□□□□ 0.26
HIPK3-201ENST00000303296 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.69■□□□□ 0.26
HIPK3-201ENST00000303296 EVC2Q86UK5 1308 aa16.69■□□□□ 0.26
HIPK3-201ENST00000303296 PHLDB1Q86UU1 1377 aa16.69■□□□□ 0.26
HIPK3-201ENST00000303296 TRAK2O60296 914 aa16.69■□□□□ 0.26
HIPK3-201ENST00000303296 TRERF1Q96PN7 1200 aa16.69■□□□□ 0.26
HIPK3-201ENST00000303296 UQCRHLA0A096LP55 91 aa16.69■□□□□ 0.26
HIPK3-201ENST00000303296 UQCRHP07919 91 aa16.69■□□□□ 0.26
HIPK3-201ENST00000303296 PPP1R12BO60237 982 aaPredicted RBP16.68■□□□□ 0.26
HIPK3-201ENST00000303296 GCOM1H8Y6P7 765 aaPredicted RBP16.68■□□□□ 0.26
HIPK3-201ENST00000303296 MYZAPP0CAP1 466 aa16.68■□□□□ 0.26
HIPK3-201ENST00000303296 ZMYND15Q9H091 742 aa16.68■□□□□ 0.26
HIPK3-201ENST00000303296 SH3BP5O60239 455 aa16.68■□□□□ 0.26
HIPK3-201ENST00000303296 CCDC192P0DO97 292 aa16.68■□□□□ 0.26
HIPK3-201ENST00000303296 PSMC4P43686 418 aa16.68■□□□□ 0.26
HIPK3-201ENST00000303296 TMCO4Q5TGY1 634 aa16.68■□□□□ 0.26
HIPK3-201ENST00000303296 GIGYF2Q6Y7W6 1299 aaKnown RBP16.68■□□□□ 0.26
HIPK3-201ENST00000303296 CBFA2T2O43439 604 aa16.68■□□□□ 0.26
HIPK3-201ENST00000303296 TDO2P48775 406 aa16.68■□□□□ 0.26
HIPK3-201ENST00000303296 MRE11P49959 708 aa16.68■□□□□ 0.26
HIPK3-201ENST00000303296 DAAM2Q86T65 1068 aa16.68■□□□□ 0.26
HIPK3-201ENST00000303296 KIF15Q9NS87 1388 aa16.67■□□□□ 0.26
HIPK3-201ENST00000303296 LUZP1Q86V48 1076 aa16.67■□□□□ 0.26
HIPK3-201ENST00000303296 TSNARE1Q96NA8 513 aa16.67■□□□□ 0.26
HIPK3-201ENST00000303296 TNIP1Q15025 636 aa16.67■□□□□ 0.26
HIPK3-201ENST00000303296 CCDC96Q2M329 555 aa16.67■□□□□ 0.26
HIPK3-201ENST00000303296 ZFP91Q96JP5 570 aaPredicted RBP16.67■□□□□ 0.26
HIPK3-201ENST00000303296 PDCP20941 246 aa16.67■□□□□ 0.26
HIPK3-201ENST00000303296 NACAP1Q9BZK3 213 aa16.67■□□□□ 0.26
HIPK3-201ENST00000303296 SPECC1Q5M775 1068 aa16.67■□□□□ 0.26
HIPK3-201ENST00000303296 FILIP1Q7Z7B0 1213 aa16.67■□□□□ 0.26
HIPK3-201ENST00000303296 PUF60Q9UHX1 559 aaKnown RBP16.67■□□□□ 0.26
HIPK3-201ENST00000303296 ARHGAP29Q52LW3 1261 aa16.67■□□□□ 0.26
HIPK3-201ENST00000303296 PPP1R14CQ8TAE6 165 aa16.67■□□□□ 0.26
HIPK3-201ENST00000303296 MPHOSPH8Q99549 860 aa16.67■□□□□ 0.26
HIPK3-201ENST00000303296 FHAD1B1AJZ9 1412 aa16.66■□□□□ 0.26
HIPK3-201ENST00000303296 SETD5Q9C0A6 1442 aa16.66■□□□□ 0.26
HIPK3-201ENST00000303296 CDC45O75419 566 aa16.66■□□□□ 0.26
HIPK3-201ENST00000303296 BICDL1Q6ZP65 573 aa16.66■□□□□ 0.26
HIPK3-201ENST00000303296 MAP3K9P80192 1104 aa16.66■□□□□ 0.26
HIPK3-201ENST00000303296 CFAP58Q5T655 872 aa16.66■□□□□ 0.26
HIPK3-201ENST00000303296 CACNA2D4Q7Z3S7 1137 aa16.66■□□□□ 0.26
HIPK3-201ENST00000303296 OTUD6BQ8N6M0 293 aa16.66■□□□□ 0.26
HIPK3-201ENST00000303296 ARHGAP35Q9NRY4 1499 aa16.66■□□□□ 0.26
HIPK3-201ENST00000303296 SPA17Q15506 151 aa16.65■□□□□ 0.26
HIPK3-201ENST00000303296 KLHL10Q6JEL2 608 aa16.65■□□□□ 0.26
HIPK3-201ENST00000303296 WDHD1O75717 1129 aaPredicted RBP16.65■□□□□ 0.26
HIPK3-201ENST00000303296 GRM1Q13255 1194 aa16.65■□□□□ 0.26
HIPK3-201ENST00000303296 MYBBP1AQ9BQG0 1328 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms