RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 CCER1Q8TC90 406 aaPredicted RBP15.88■□□□□ 0.13
CLCC1-201ENST00000302500 RGPD1P0DJD0 1748 aa15.86■□□□□ 0.13
CLCC1-201ENST00000302500 SBF2Q86WG5 1849 aa15.86■□□□□ 0.13
CLCC1-201ENST00000302500 TMF1P82094 1093 aa15.86■□□□□ 0.13
CLCC1-201ENST00000302500 CARD14Q9BXL6 1004 aa15.86■□□□□ 0.13
CLCC1-201ENST00000302500 FAM208AQ9UK61 1670 aaKnown RBP15.86■□□□□ 0.13
CLCC1-201ENST00000302500 BLMP54132 1417 aaPredicted RBP15.85■□□□□ 0.13
CLCC1-201ENST00000302500 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.85■□□□□ 0.13
CLCC1-201ENST00000302500 KCNH5Q8NCM2 988 aa15.85■□□□□ 0.13
CLCC1-201ENST00000302500 TMC1Q8TDI8 760 aa15.85■□□□□ 0.13
CLCC1-201ENST00000302500 TERF2IPQ9NYB0 399 aa15.85■□□□□ 0.13
CLCC1-201ENST00000302500 WDR17Q8IZU2 1322 aa15.84■□□□□ 0.13
CLCC1-201ENST00000302500 HDGFL2Q7Z4V5 671 aaPredicted RBP15.84■□□□□ 0.13
CLCC1-201ENST00000302500 KRT27Q7Z3Y8 459 aa15.83■□□□□ 0.12
CLCC1-201ENST00000302500 RGPD2P0DJD1 1756 aa15.83■□□□□ 0.12
CLCC1-201ENST00000302500 C11orf95C9JLR9 678 aaPredicted RBP15.82■□□□□ 0.12
CLCC1-201ENST00000302500 FYB1O15117 783 aa15.82■□□□□ 0.12
CLCC1-201ENST00000302500 STRN4Q9NRL3 753 aa15.82■□□□□ 0.12
CLCC1-201ENST00000302500 THRAP3Q9Y2W1 955 aaKnown RBP15.82■□□□□ 0.12
CLCC1-201ENST00000302500 SHANK3Q9BYB0 1731 aa15.82■□□□□ 0.12
CLCC1-201ENST00000302500 ERBB3P21860 1342 aa15.82■□□□□ 0.12
CLCC1-201ENST00000302500 HSPA5P11021 654 aaKnown RBP15.81■□□□□ 0.12
CLCC1-201ENST00000302500 TCP11L2Q8N4U5 519 aa15.81■□□□□ 0.12
CLCC1-201ENST00000302500 CCDC125Q86Z20 511 aa15.8■□□□□ 0.12
CLCC1-201ENST00000302500 CCDC9Q9Y3X0 531 aaKnown RBP15.8■□□□□ 0.12
CLCC1-201ENST00000302500 RREB1Q92766 1687 aa15.8■□□□□ 0.12
CLCC1-201ENST00000302500 BCL9O00512 1426 aa15.79■□□□□ 0.12
CLCC1-201ENST00000302500 FBLN1P23142 703 aa15.78■□□□□ 0.12
CLCC1-201ENST00000302500 FAM182BQ5T319 152 aa15.78■□□□□ 0.12
CLCC1-201ENST00000302500 RGPD3A6NKT7 1758 aaPredicted RBP15.78■□□□□ 0.12
CLCC1-201ENST00000302500 RGPD4Q7Z3J3 1758 aa15.78■□□□□ 0.12
CLCC1-201ENST00000302500 NSD3Q9BZ95 1437 aa15.77■□□□□ 0.12
CLCC1-201ENST00000302500 EIF4G2P78344 907 aaKnown RBP eCLIP15.77■□□□□ 0.12
CLCC1-201ENST00000302500 CARD10Q9BWT7 1032 aa15.77■□□□□ 0.12
CLCC1-201ENST00000302500 MAP3K19Q56UN5 1328 aa15.77■□□□□ 0.11
CLCC1-201ENST00000302500 CDCA8Q53HL2 280 aa15.76■□□□□ 0.11
CLCC1-201ENST00000302500 NCAPD2Q15021 1401 aa15.76■□□□□ 0.11
CLCC1-201ENST00000302500 SOX12O15370 315 aa15.75■□□□□ 0.11
CLCC1-201ENST00000302500 USP35Q9P2H5 1018 aa15.75■□□□□ 0.11
CLCC1-201ENST00000302500 MAP2P11137 1827 aaKnown RBP15.75■□□□□ 0.11
CLCC1-201ENST00000302500 RTL1A6NKG5 1358 aa15.75■□□□□ 0.11
CLCC1-201ENST00000302500 TNS2Q63HR2 1409 aa15.75■□□□□ 0.11
CLCC1-201ENST00000302500 EVA1CP58658 441 aa15.74■□□□□ 0.11
CLCC1-201ENST00000302500 IP6K1Q92551 441 aa15.74■□□□□ 0.11
CLCC1-201ENST00000302500 CCDC7Q96M83 1385 aa15.74■□□□□ 0.11
CLCC1-201ENST00000302500 NUP188Q5SRE5 1749 aa15.74■□□□□ 0.11
CLCC1-201ENST00000302500 DEFB132Q7Z7B7 95 aa15.73■□□□□ 0.11
CLCC1-201ENST00000302500 GGNBP2Q9H3C7 697 aa15.73■□□□□ 0.11
CLCC1-201ENST00000302500 KIF24Q5T7B8 1368 aa15.72■□□□□ 0.11
CLCC1-201ENST00000302500 NHSQ6T4R5 1651 aa15.72■□□□□ 0.11
CLCC1-201ENST00000302500 HOXC9P31274 260 aa15.71■□□□□ 0.11
CLCC1-201ENST00000302500 TOM1L2Q6ZVM7 507 aa15.71■□□□□ 0.11
CLCC1-201ENST00000302500 COG3Q96JB2 828 aa15.71■□□□□ 0.11
CLCC1-201ENST00000302500 OVOS2A0A0G2JMS6 1433 aa15.7■□□□□ 0.1
CLCC1-201ENST00000302500 SMG6Q86US8 1419 aaKnown RBP15.7■□□□□ 0.1
CLCC1-201ENST00000302500 MARCH10Q8NA82 808 aaPredicted RBP15.7■□□□□ 0.1
CLCC1-201ENST00000302500 ANKRD24Q8TF21 1146 aa15.7■□□□□ 0.1
CLCC1-201ENST00000302500 ZBTB7CA1YPR0 619 aa15.69■□□□□ 0.1
CLCC1-201ENST00000302500 MEGF6O75095 1541 aa15.69■□□□□ 0.1
CLCC1-201ENST00000302500 KIF7Q2M1P5 1343 aa15.69■□□□□ 0.1
CLCC1-201ENST00000302500 RRS1Q15050 365 aaKnown RBP15.68■□□□□ 0.1
CLCC1-201ENST00000302500 FAM196AQ6ZSG2 479 aa15.68■□□□□ 0.1
CLCC1-201ENST00000302500 INSRP06213 1382 aa15.68■□□□□ 0.1
CLCC1-201ENST00000302500 PKD1L3Q7Z443 1732 aa15.68■□□□□ 0.1
CLCC1-201ENST00000302500 PTF1AQ7RTS3 328 aa15.68■□□□□ 0.1
CLCC1-201ENST00000302500 CAMKK2Q96RR4 588 aa15.68■□□□□ 0.1
CLCC1-201ENST00000302500 CDCA7Q9BWT1 371 aaPredicted RBP15.68■□□□□ 0.1
CLCC1-201ENST00000302500 A0A0G2JS52 829 aa15.66■□□□□ 0.1
CLCC1-201ENST00000302500 PER1O15534 1290 aaPredicted RBP15.66■□□□□ 0.1
CLCC1-201ENST00000302500 MYT1Q01538 1121 aa15.66■□□□□ 0.1
CLCC1-201ENST00000302500 FLT4P35916 1363 aa15.65■□□□□ 0.1
CLCC1-201ENST00000302500 TRIM37O94972 964 aa15.65■□□□□ 0.1
CLCC1-201ENST00000302500 DDB1Q16531 1140 aa15.65■□□□□ 0.1
CLCC1-201ENST00000302500 PIAS4Q8N2W9 510 aaPredicted RBP15.65■□□□□ 0.1
CLCC1-201ENST00000302500 PANK3Q9H999 370 aa15.65■□□□□ 0.1
CLCC1-201ENST00000302500 BTAF1O14981 1849 aa15.64■□□□□ 0.09
CLCC1-201ENST00000302500 CGNL1Q0VF96 1302 aa15.64■□□□□ 0.09
CLCC1-201ENST00000302500 PDE3BQ13370 1112 aa15.64■□□□□ 0.09
CLCC1-201ENST00000302500 HSP90AB2PQ58FF8 381 aa15.64■□□□□ 0.09
CLCC1-201ENST00000302500 EMILIN1Q9Y6C2 1016 aa15.64■□□□□ 0.09
CLCC1-201ENST00000302500 PAPPAQ13219 1627 aa15.64■□□□□ 0.09
CLCC1-201ENST00000302500 NSD2O96028 1365 aa15.63■□□□□ 0.09
CLCC1-201ENST00000302500 PARD3Q8TEW0 1356 aa15.63■□□□□ 0.09
CLCC1-201ENST00000302500 EN1Q05925 392 aaPredicted RBP15.63■□□□□ 0.09
CLCC1-201ENST00000302500 AMER1Q5JTC6 1135 aaPredicted RBP15.63■□□□□ 0.09
CLCC1-201ENST00000302500 NBPF6Q5VWK0 638 aa15.63■□□□□ 0.09
CLCC1-201ENST00000302500 NBPF4Q96M43 638 aa15.63■□□□□ 0.09
CLCC1-201ENST00000302500 DOT1LQ8TEK3 1739 aa15.63■□□□□ 0.09
CLCC1-201ENST00000302500 TOGARAM1Q9Y4F4 1720 aa15.63■□□□□ 0.09
CLCC1-201ENST00000302500 LRP5O75197 1615 aa15.62■□□□□ 0.09
CLCC1-201ENST00000302500 WASHC2AQ641Q2 1341 aa15.62■□□□□ 0.09
CLCC1-201ENST00000302500 IL2RBP14784 551 aa15.62■□□□□ 0.09
CLCC1-201ENST00000302500 POLKQ9UBT6 870 aa15.62■□□□□ 0.09
CLCC1-201ENST00000302500 CSB-PGBD3P0DP91 1061 aa15.61■□□□□ 0.09
CLCC1-201ENST00000302500 EZH2Q15910 746 aaKnown RBP15.61■□□□□ 0.09
CLCC1-201ENST00000302500 NLRP2Q9NX02 1062 aa15.61■□□□□ 0.09
CLCC1-201ENST00000302500 BAG6P46379 1132 aa15.6■□□□□ 0.09
CLCC1-201ENST00000302500 PROM2Q8N271 834 aa15.6■□□□□ 0.09
CLCC1-201ENST00000302500 LY75O60449 1722 aa15.59■□□□□ 0.09
CLCC1-201ENST00000302500 BCL11BQ9C0K0 894 aaPredicted RBP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms