RNA–Protein interactions for RNA: ENST00000300648.6

GCN1-201, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCN1, Length 8,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-201ENST00000300648 CCDC30Q5VVM6 783 aa13.32□□□□□ -0.28
GCN1-201ENST00000300648 ZNF397Q8NF99 534 aaPredicted RBP13.32□□□□□ -0.28
GCN1-201ENST00000300648 WASF1Q92558 559 aa13.32□□□□□ -0.28
GCN1-201ENST00000300648 CCDC141Q6ZP82 1450 aa13.32□□□□□ -0.28
GCN1-201ENST00000300648 CGNQ9P2M7 1197 aaKnown RBP13.31□□□□□ -0.28
GCN1-201ENST00000300648 LNPKQ9C0E8 428 aa13.31□□□□□ -0.28
GCN1-201ENST00000300648 UBXN4Q92575 508 aa13.31□□□□□ -0.28
GCN1-201ENST00000300648 RBM33Q96EV2 1170 aaKnown RBP13.31□□□□□ -0.28
GCN1-201ENST00000300648 TMCO3Q6UWJ1 677 aa13.31□□□□□ -0.28
GCN1-201ENST00000300648 CCDC83Q8IWF9 413 aa13.31□□□□□ -0.28
GCN1-201ENST00000300648 GOLGA6L9A6NEM1 432 aa13.3□□□□□ -0.28
GCN1-201ENST00000300648 SPATA24Q86W54 205 aa13.3□□□□□ -0.28
GCN1-201ENST00000300648 FSD1Q9BTV5 496 aa13.3□□□□□ -0.28
GCN1-201ENST00000300648 CETN2P41208 172 aa13.3□□□□□ -0.28
GCN1-201ENST00000300648 CCT4P50991 539 aaKnown RBP13.3□□□□□ -0.28
GCN1-201ENST00000300648 PPP6R1Q9UPN7 881 aa13.3□□□□□ -0.28
GCN1-201ENST00000300648 NEK4P51957 841 aa13.3□□□□□ -0.28
GCN1-201ENST00000300648 NOL7Q9UMY1 257 aaKnown RBP13.3□□□□□ -0.28
GCN1-201ENST00000300648 ZSCAN25Q6NSZ9 544 aa13.3□□□□□ -0.28
GCN1-201ENST00000300648 EVA1CP58658 441 aa13.3□□□□□ -0.28
GCN1-201ENST00000300648 FILIP1Q7Z7B0 1213 aa13.3□□□□□ -0.28
GCN1-201ENST00000300648 RNF214Q8ND24 703 aa13.3□□□□□ -0.28
GCN1-201ENST00000300648 GPRASP1Q5JY77 1395 aa13.29□□□□□ -0.28
GCN1-201ENST00000300648 KIF18AQ8NI77 898 aa13.29□□□□□ -0.28
GCN1-201ENST00000300648 GNL3LQ9NVN8 582 aaKnown RBP13.29□□□□□ -0.28
GCN1-201ENST00000300648 DHX29Q7Z478 1369 aaKnown RBP13.29□□□□□ -0.28
GCN1-201ENST00000300648 PRPF40AO75400 957 aaKnown RBP13.29□□□□□ -0.28
GCN1-201ENST00000300648 TSPYL4Q9UJ04 414 aa13.29□□□□□ -0.28
GCN1-201ENST00000300648 POGZQ7Z3K3 1410 aa13.29□□□□□ -0.28
GCN1-201ENST00000300648 GAS2L2Q8NHY3 880 aa13.29□□□□□ -0.28
GCN1-201ENST00000300648 CEP131Q9UPN4 1083 aa13.29□□□□□ -0.28
GCN1-201ENST00000300648 NACAP1Q9BZK3 213 aa13.29□□□□□ -0.28
GCN1-201ENST00000300648 STAMBPO95630 424 aa13.29□□□□□ -0.28
GCN1-201ENST00000300648 TRAK1Q9UPV9 953 aa13.29□□□□□ -0.28
GCN1-201ENST00000300648 CC2D2AQ9P2K1 1620 aa13.28□□□□□ -0.28
GCN1-201ENST00000300648 NCOA2Q15596 1464 aa13.28□□□□□ -0.28
GCN1-201ENST00000300648 PDCL3Q9H2J4 239 aa13.28□□□□□ -0.28
GCN1-201ENST00000300648 RPGRIP1LQ68CZ1 1315 aa13.28□□□□□ -0.28
GCN1-201ENST00000300648 PPM1EQ8WY54 764 aa13.28□□□□□ -0.28
GCN1-201ENST00000300648 DNMBPQ6XZF7 1577 aa13.28□□□□□ -0.28
GCN1-201ENST00000300648 PPP1R12BO60237 982 aaPredicted RBP13.28□□□□□ -0.28
GCN1-201ENST00000300648 HMGB1P09429 215 aaKnown RBP13.28□□□□□ -0.28
GCN1-201ENST00000300648 DDX12PQ92771 950 aa13.28□□□□□ -0.28
GCN1-201ENST00000300648 BMP2KQ9NSY1 1161 aaPredicted RBP13.28□□□□□ -0.28
GCN1-201ENST00000300648 EPB41L2O43491 1005 aaKnown RBP13.27□□□□□ -0.28
GCN1-201ENST00000300648 GNAI2P04899 355 aa13.27□□□□□ -0.28
GCN1-201ENST00000300648 WASHC4Q2M389 1173 aa13.27□□□□□ -0.28
GCN1-201ENST00000300648 ARHGAP29Q52LW3 1261 aa13.27□□□□□ -0.28
GCN1-201ENST00000300648 TUBB4BP68371 445 aa13.27□□□□□ -0.28
GCN1-201ENST00000300648 CFTRP13569 1480 aa13.27□□□□□ -0.28
GCN1-201ENST00000300648 SLC52A1Q9NWF4 448 aa13.27□□□□□ -0.28
GCN1-201ENST00000300648 CCDC9Q9Y3X0 531 aaKnown RBP13.27□□□□□ -0.28
GCN1-201ENST00000300648 CCDC57Q2TAC2 916 aa13.27□□□□□ -0.29
GCN1-201ENST00000300648 PNISRQ8TF01 805 aaKnown RBP13.27□□□□□ -0.29
GCN1-201ENST00000300648 VPS36Q86VN1 386 aa13.27□□□□□ -0.29
GCN1-201ENST00000300648 CTAGE5O15320 804 aa13.27□□□□□ -0.29
GCN1-201ENST00000300648 KRT18P05783 430 aaKnown RBP13.27□□□□□ -0.29
GCN1-201ENST00000300648 POTEJP0CG39 1038 aa13.27□□□□□ -0.29
GCN1-201ENST00000300648 ANKRD30BQ9BXX2 1392 aa13.27□□□□□ -0.29
GCN1-201ENST00000300648 FIBPO43427 364 aa13.27□□□□□ -0.29
GCN1-201ENST00000300648 ME1P48163 572 aa13.27□□□□□ -0.29
GCN1-201ENST00000300648 TAF4BQ92750 862 aa13.27□□□□□ -0.29
GCN1-201ENST00000300648 PLCD4Q9BRC7 762 aa13.27□□□□□ -0.29
GCN1-201ENST00000300648 GCOM1H8Y6P7 765 aaPredicted RBP13.26□□□□□ -0.29
GCN1-201ENST00000300648 MYZAPP0CAP1 466 aa13.26□□□□□ -0.29
GCN1-201ENST00000300648 NUP62CLQ9H1M0 184 aa13.26□□□□□ -0.29
GCN1-201ENST00000300648 CTNNA3Q9UI47 895 aa13.26□□□□□ -0.29
GCN1-201ENST00000300648 MRC2Q9UBG0 1479 aa13.26□□□□□ -0.29
GCN1-201ENST00000300648 SFPQP23246 707 aaKnown RBP eCLIP13.26□□□□□ -0.29
GCN1-201ENST00000300648 PSME1Q06323 249 aa13.26□□□□□ -0.29
GCN1-201ENST00000300648 MAP3K1Q13233 1512 aa13.26□□□□□ -0.29
GCN1-201ENST00000300648 LTV1Q96GA3 475 aaPredicted RBP13.26□□□□□ -0.29
GCN1-201ENST00000300648 BACH2Q9BYV9 841 aa13.26□□□□□ -0.29
GCN1-201ENST00000300648 RAPGEF4Q8WZA2 1011 aa13.25□□□□□ -0.29
GCN1-201ENST00000300648 UPF3BQ9BZI7 483 aaKnown RBP13.25□□□□□ -0.29
GCN1-201ENST00000300648 MAP3K11Q16584 847 aa13.25□□□□□ -0.29
GCN1-201ENST00000300648 CCDC102AQ96A19 550 aa13.25□□□□□ -0.29
GCN1-201ENST00000300648 GSDMDP57764 484 aa13.25□□□□□ -0.29
GCN1-201ENST00000300648 SMC1AQ14683 1233 aaKnown RBP13.25□□□□□ -0.29
GCN1-201ENST00000300648 TTLL5Q6EMB2 1281 aa13.25□□□□□ -0.29
GCN1-201ENST00000300648 IGF1RP08069 1367 aa13.25□□□□□ -0.29
GCN1-201ENST00000300648 FGFR1OPO95684 399 aaKnown RBP13.25□□□□□ -0.29
GCN1-201ENST00000300648 EIF2S2P20042 333 aaKnown RBP13.25□□□□□ -0.29
GCN1-201ENST00000300648 FBXW7Q969H0 707 aa13.25□□□□□ -0.29
GCN1-201ENST00000300648 RAD21O60216 631 aa13.25□□□□□ -0.29
GCN1-201ENST00000300648 KIF5CO60282 957 aa13.25□□□□□ -0.29
GCN1-201ENST00000300648 GIGYF2Q6Y7W6 1299 aaKnown RBP13.25□□□□□ -0.29
GCN1-201ENST00000300648 RIC3Q7Z5B4 369 aa13.25□□□□□ -0.29
GCN1-201ENST00000300648 PHAXQ9H814 394 aaKnown RBP13.25□□□□□ -0.29
GCN1-201ENST00000300648 ELL2O00472 640 aaPredicted RBP13.24□□□□□ -0.29
GCN1-201ENST00000300648 TUBB4AP04350 444 aa13.24□□□□□ -0.29
GCN1-201ENST00000300648 SPATA32Q96LK8 384 aa13.24□□□□□ -0.29
GCN1-201ENST00000300648 WDR63Q8IWG1 891 aa13.24□□□□□ -0.29
GCN1-201ENST00000300648 ZNF692Q9BU19 519 aaPredicted RBP13.24□□□□□ -0.29
GCN1-201ENST00000300648 SCAND2PQ9GZW5 306 aaPredicted RBP13.24□□□□□ -0.29
GCN1-201ENST00000300648 TAOK3Q9H2K8 898 aa13.24□□□□□ -0.29
GCN1-201ENST00000300648 LAMC3Q9Y6N6 1575 aa13.24□□□□□ -0.29
GCN1-201ENST00000300648 TIAM1Q13009 1591 aa13.23□□□□□ -0.29
GCN1-201ENST00000300648 ATF3P18847 181 aa13.23□□□□□ -0.29
GCN1-201ENST00000300648 PTPN14Q15678 1187 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms