RNA–Protein interactions for RNA: ENST00000296325.9

LRPAP1-201, Transcript of LDL receptor related protein associated protein 1, humanhuman

TSL 1 (best)

Gene LRPAP1, Length 1,078 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPAP1-201ENST00000296325 DCAF11Q8TEB1 546 aa26.13■■□□□ 1.77
LRPAP1-201ENST00000296325 KDM2AQ9Y2K7 1162 aa26.13■■□□□ 1.77
LRPAP1-201ENST00000296325 ATF5Q9Y2D1 282 aaPredicted RBP26.12■■□□□ 1.77
LRPAP1-201ENST00000296325 MARCH10Q8NA82 808 aaPredicted RBP26.1■■□□□ 1.77
LRPAP1-201ENST00000296325 IFFO2Q5TF58 517 aa26.09■■□□□ 1.77
LRPAP1-201ENST00000296325 WNK3Q9BYP7 1800 aa26.09■■□□□ 1.77
LRPAP1-201ENST00000296325 SLIT3O75094 1523 aa26.09■■□□□ 1.77
LRPAP1-201ENST00000296325 SLC15A2Q16348 729 aa26.08■■□□□ 1.77
LRPAP1-201ENST00000296325 TXNRD1Q16881 649 aa26.08■■□□□ 1.77
LRPAP1-201ENST00000296325 BRD4O60885 1362 aaPredicted RBP26.07■■□□□ 1.76
LRPAP1-201ENST00000296325 GOLGB1Q14789 3259 aaKnown RBP26.07■■□□□ 1.76
LRPAP1-201ENST00000296325 MTFR1LQ9H019 292 aa26.07■■□□□ 1.76
LRPAP1-201ENST00000296325 COL18A1P39060 1754 aa26.07■■□□□ 1.76
LRPAP1-201ENST00000296325 MAP3K5Q99683 1374 aa26.07■■□□□ 1.76
LRPAP1-201ENST00000296325 STK32BQ9NY57 414 aa26.06■■□□□ 1.76
LRPAP1-201ENST00000296325 AKAP12Q02952 1782 aa26.03■■□□□ 1.76
LRPAP1-201ENST00000296325 TOM1L2Q6ZVM7 507 aa26.03■■□□□ 1.76
LRPAP1-201ENST00000296325 CDCA7Q9BWT1 371 aaPredicted RBP26.03■■□□□ 1.76
LRPAP1-201ENST00000296325 WDR17Q8IZU2 1322 aa26.03■■□□□ 1.76
LRPAP1-201ENST00000296325 PPIP5K1Q6PFW1 1433 aa26.03■■□□□ 1.76
LRPAP1-201ENST00000296325 AXIN2Q9Y2T1 843 aa26.01■■□□□ 1.75
LRPAP1-201ENST00000296325 USP6P35125 1406 aa25.99■■□□□ 1.75
LRPAP1-201ENST00000296325 PAPPAQ13219 1627 aa25.99■■□□□ 1.75
LRPAP1-201ENST00000296325 RAB3GAP2Q9H2M9 1393 aa25.97■■□□□ 1.75
LRPAP1-201ENST00000296325 NLRP6P59044 892 aa25.97■■□□□ 1.75
LRPAP1-201ENST00000296325 ARXQ96QS3 562 aa25.97■■□□□ 1.75
LRPAP1-201ENST00000296325 CPSF1Q10570 1443 aaKnown RBP25.97■■□□□ 1.75
LRPAP1-201ENST00000296325 ZBTB7CA1YPR0 619 aa25.96■■□□□ 1.75
LRPAP1-201ENST00000296325 CARD10Q9BWT7 1032 aa25.95■■□□□ 1.74
LRPAP1-201ENST00000296325 PIK3C2AO00443 1686 aa25.94■■□□□ 1.74
LRPAP1-201ENST00000296325 KIAA1210Q9ULL0 1709 aa25.94■■□□□ 1.74
LRPAP1-201ENST00000296325 ARHGEF25Q86VW2 580 aa25.93■■□□□ 1.74
LRPAP1-201ENST00000296325 NHSQ6T4R5 1651 aa25.93■■□□□ 1.74
LRPAP1-201ENST00000296325 TNS2Q63HR2 1409 aa25.92■■□□□ 1.74
LRPAP1-201ENST00000296325 SRPK2P78362 688 aaKnown RBP25.92■■□□□ 1.74
LRPAP1-201ENST00000296325 CABP2Q9NPB3 220 aa25.91■■□□□ 1.74
LRPAP1-201ENST00000296325 TRPM1Q7Z4N2 1603 aa25.91■■□□□ 1.74
LRPAP1-201ENST00000296325 EXOC5O00471 708 aa25.89■■□□□ 1.74
LRPAP1-201ENST00000296325 GIGYF1O75420 1035 aaPredicted RBP25.89■■□□□ 1.74
LRPAP1-201ENST00000296325 CABP1Q9NZU7 370 aa25.89■■□□□ 1.74
LRPAP1-201ENST00000296325 RGPD5Q99666 1765 aa25.87■■□□□ 1.73
LRPAP1-201ENST00000296325 CCDC7Q96M83 1385 aa25.87■■□□□ 1.73
LRPAP1-201ENST00000296325 SHANK3Q9BYB0 1731 aa25.86■■□□□ 1.73
LRPAP1-201ENST00000296325 ZNF827Q17R98 1081 aa25.86■■□□□ 1.73
LRPAP1-201ENST00000296325 NBPF1Q3BBV0 1214 aa25.86■■□□□ 1.73
LRPAP1-201ENST00000296325 ABCC6O95255 1503 aa25.86■■□□□ 1.73
LRPAP1-201ENST00000296325 CENPJQ9HC77 1338 aaPredicted RBP25.86■■□□□ 1.73
LRPAP1-201ENST00000296325 GPR162Q16538 588 aa25.85■■□□□ 1.73
LRPAP1-201ENST00000296325 COL24A1Q17RW2 1714 aa25.85■■□□□ 1.73
LRPAP1-201ENST00000296325 QRICH2Q9H0J4 1663 aa25.84■■□□□ 1.73
LRPAP1-201ENST00000296325 NFAT5O94916 1531 aa25.83■■□□□ 1.73
LRPAP1-201ENST00000296325 KCNH5Q8NCM2 988 aa25.82■■□□□ 1.72
LRPAP1-201ENST00000296325 LRRC4BQ9NT99 713 aa25.82■■□□□ 1.72
LRPAP1-201ENST00000296325 CSB-PGBD3P0DP91 1061 aa25.81■■□□□ 1.72
LRPAP1-201ENST00000296325 BTAF1O14981 1849 aa25.8■■□□□ 1.72
LRPAP1-201ENST00000296325 SLC16A10Q8TF71 515 aa25.8■■□□□ 1.72
LRPAP1-201ENST00000296325 ACSBG1Q96GR2 724 aa25.8■■□□□ 1.72
LRPAP1-201ENST00000296325 AKT1S1Q96B36 256 aa25.79■■□□□ 1.72
LRPAP1-201ENST00000296325 QSER1Q2KHR3 1735 aa25.79■■□□□ 1.72
LRPAP1-201ENST00000296325 TTC21BQ7Z4L5 1316 aa25.78■■□□□ 1.72
LRPAP1-201ENST00000296325 ERBB3P21860 1342 aa25.73■■□□□ 1.71
LRPAP1-201ENST00000296325 PNPLA7Q6ZV29 1317 aa25.73■■□□□ 1.71
LRPAP1-201ENST00000296325 TTC21AQ8NDW8 1320 aa25.73■■□□□ 1.71
LRPAP1-201ENST00000296325 NLGN2Q8NFZ4 835 aa25.73■■□□□ 1.71
LRPAP1-201ENST00000296325 SOX12O15370 315 aa25.72■■□□□ 1.71
LRPAP1-201ENST00000296325 POLD1P28340 1107 aa25.72■■□□□ 1.71
LRPAP1-201ENST00000296325 ZNF692Q9BU19 519 aaPredicted RBP25.72■■□□□ 1.71
LRPAP1-201ENST00000296325 IL2RBP14784 551 aa25.69■■□□□ 1.7
LRPAP1-201ENST00000296325 YBX3P16989 372 aaKnown RBP eCLIP25.69■■□□□ 1.73e-8■■□□□ 12.9
LRPAP1-201ENST00000296325 SLC27A3Q5K4L6 730 aa25.69■■□□□ 1.7
LRPAP1-201ENST00000296325 KLHL34Q8N239 644 aa25.69■■□□□ 1.7
LRPAP1-201ENST00000296325 PELP1Q8IZL8 1130 aaKnown RBP25.68■■□□□ 1.7
LRPAP1-201ENST00000296325 TUBGCP6Q96RT7 1819 aa25.67■■□□□ 1.7
LRPAP1-201ENST00000296325 EVC2Q86UK5 1308 aa25.66■■□□□ 1.7
LRPAP1-201ENST00000296325 USP54Q70EL1 1684 aa25.65■■□□□ 1.7
LRPAP1-201ENST00000296325 GRIN3BO60391 1043 aa25.65■■□□□ 1.7
LRPAP1-201ENST00000296325 NLRP2Q9NX02 1062 aa25.65■■□□□ 1.7
LRPAP1-201ENST00000296325 USP31Q70CQ4 1352 aa25.65■■□□□ 1.7
LRPAP1-201ENST00000296325 ATP10DQ9P241 1426 aa25.64■■□□□ 1.7
LRPAP1-201ENST00000296325 KAT6BQ8WYB5 2073 aa25.64■■□□□ 1.69
LRPAP1-201ENST00000296325 TFCP2L1Q9NZI6 479 aa25.61■■□□□ 1.69
LRPAP1-201ENST00000296325 ADCY9O60503 1353 aa25.6■■□□□ 1.69
LRPAP1-201ENST00000296325 KTN1Q86UP2 1357 aaKnown RBP25.6■■□□□ 1.69
LRPAP1-201ENST00000296325 MON2Q7Z3U7 1717 aa25.6■■□□□ 1.69
LRPAP1-201ENST00000296325 LY75O60449 1722 aa25.58■■□□□ 1.69
LRPAP1-201ENST00000296325 HSPA6P17066 643 aa25.58■■□□□ 1.69
LRPAP1-201ENST00000296325 KCNQ4P56696 695 aa25.58■■□□□ 1.69
LRPAP1-201ENST00000296325 ANKRD24Q8TF21 1146 aa25.57■■□□□ 1.68
LRPAP1-201ENST00000296325 NSD2O96028 1365 aa25.56■■□□□ 1.68
LRPAP1-201ENST00000296325 LTN1O94822 1766 aa25.56■■□□□ 1.68
LRPAP1-201ENST00000296325 ANKRD36BQ8N2N9 1353 aa25.55■■□□□ 1.68
LRPAP1-201ENST00000296325 SBNO2Q9Y2G9 1366 aa25.54■■□□□ 1.68
LRPAP1-201ENST00000296325 GPBP1L1Q9HC44 474 aaPredicted RBP25.53■■□□□ 1.68
LRPAP1-201ENST00000296325 CD163L1Q9NR16 1453 aa25.53■■□□□ 1.68
LRPAP1-201ENST00000296325 NME9Q86XW9 330 aa25.51■■□□□ 1.67
LRPAP1-201ENST00000296325 COL23A1Q86Y22 540 aaPredicted RBP25.51■■□□□ 1.67
LRPAP1-201ENST00000296325 PRIM1P49642 420 aaKnown RBP25.5■■□□□ 1.67
LRPAP1-201ENST00000296325 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.5■■□□□ 1.67
LRPAP1-201ENST00000296325 DDX54Q8TDD1 881 aaKnown RBP25.5■■□□□ 1.67
LRPAP1-201ENST00000296325 DOT1LQ8TEK3 1739 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms