RNA–Protein interactions for RNA: ENST00000296142.3

RTP3-201, Transcript of receptor transporter protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTP3, Length 1,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTP3-201ENST00000296142 CRB1P82279 1406 aa12.11□□□□□ -0.47
RTP3-201ENST00000296142 CLSPNQ9HAW4 1339 aa12.11□□□□□ -0.47
RTP3-201ENST00000296142 CASZ1Q86V15 1759 aa12.11□□□□□ -0.47
RTP3-201ENST00000296142 PROM2Q8N271 834 aa12.11□□□□□ -0.47
RTP3-201ENST00000296142 MARCH10Q8NA82 808 aaPredicted RBP12.11□□□□□ -0.47
RTP3-201ENST00000296142 THRAP3Q9Y2W1 955 aaKnown RBP12.11□□□□□ -0.47
RTP3-201ENST00000296142 CENPJQ9HC77 1338 aaPredicted RBP12.1□□□□□ -0.47
RTP3-201ENST00000296142 OVOS2A0A0G2JMS6 1433 aa12.1□□□□□ -0.47
RTP3-201ENST00000296142 OVOS2A0A0J9YW53 1432 aa12.1□□□□□ -0.47
RTP3-201ENST00000296142 OVOS2Q6IE36 1432 aa12.1□□□□□ -0.47
RTP3-201ENST00000296142 USP6P35125 1406 aa12.09□□□□□ -0.47
RTP3-201ENST00000296142 CSB-PGBD3P0DP91 1061 aa12.09□□□□□ -0.47
RTP3-201ENST00000296142 CHD4Q14839 1912 aa12.08□□□□□ -0.47
RTP3-201ENST00000296142 DCAF8L1A6NGE4 600 aa12.08□□□□□ -0.48
RTP3-201ENST00000296142 STAC3Q96MF2 364 aa12.08□□□□□ -0.48
RTP3-201ENST00000296142 AATKQ6ZMQ8 1374 aa12.07□□□□□ -0.48
RTP3-201ENST00000296142 RGPD3A6NKT7 1758 aaPredicted RBP12.07□□□□□ -0.48
RTP3-201ENST00000296142 RGPD4Q7Z3J3 1758 aa12.07□□□□□ -0.48
RTP3-201ENST00000296142 ACSBG1Q96GR2 724 aa12.07□□□□□ -0.48
RTP3-201ENST00000296142 SLIT3O75094 1523 aa12.06□□□□□ -0.48
RTP3-201ENST00000296142 PLSCR1O15162 318 aa12.06□□□□□ -0.48
RTP3-201ENST00000296142 WDR17Q8IZU2 1322 aa12.06□□□□□ -0.48
RTP3-201ENST00000296142 PTGER2P43116 358 aa12.05□□□□□ -0.48
RTP3-201ENST00000296142 TXNRD1Q16881 649 aa12.05□□□□□ -0.48
RTP3-201ENST00000296142 NINLQ9Y2I6 1382 aa12.05□□□□□ -0.48
RTP3-201ENST00000296142 FHDC1Q9C0D6 1143 aaPredicted RBP12.04□□□□□ -0.48
RTP3-201ENST00000296142 CPSF1Q10570 1443 aaKnown RBP12.04□□□□□ -0.48
RTP3-201ENST00000296142 LTN1O94822 1766 aa12.03□□□□□ -0.48
RTP3-201ENST00000296142 BTAF1O14981 1849 aa12.03□□□□□ -0.48
RTP3-201ENST00000296142 ARHGEF25Q86VW2 580 aa12.03□□□□□ -0.48
RTP3-201ENST00000296142 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.03□□□□□ -0.48
RTP3-201ENST00000296142 SIN3AQ96ST3 1273 aa12.03□□□□□ -0.48
RTP3-201ENST00000296142 STK32BQ9NY57 414 aa12.03□□□□□ -0.48
RTP3-201ENST00000296142 TTC21BQ7Z4L5 1316 aa12.03□□□□□ -0.48
RTP3-201ENST00000296142 EXOC5O00471 708 aa12.02□□□□□ -0.49
RTP3-201ENST00000296142 L3MBTL2Q969R5 705 aa12.02□□□□□ -0.49
RTP3-201ENST00000296142 UTRNP46939 3433 aa12.02□□□□□ -0.49
RTP3-201ENST00000296142 TRPM1Q7Z4N2 1603 aa12.01□□□□□ -0.49
RTP3-201ENST00000296142 EVC2Q86UK5 1308 aa12.01□□□□□ -0.49
RTP3-201ENST00000296142 NEUROD1Q13562 356 aa12.01□□□□□ -0.49
RTP3-201ENST00000296142 SLC15A2Q16348 729 aa12.01□□□□□ -0.49
RTP3-201ENST00000296142 KLHL34Q8N239 644 aa12.01□□□□□ -0.49
RTP3-201ENST00000296142 ZNF784Q8NCA9 323 aaPredicted RBP12.01□□□□□ -0.49
RTP3-201ENST00000296142 SYT17Q9BSW7 474 aa12.01□□□□□ -0.49
RTP3-201ENST00000296142 CARD10Q9BWT7 1032 aa12.01□□□□□ -0.49
RTP3-201ENST00000296142 KCNQ4P56696 695 aa12□□□□□ -0.49
RTP3-201ENST00000296142 NLRP2Q9NX02 1062 aa12□□□□□ -0.49
RTP3-201ENST00000296142 RGPD2P0DJD1 1756 aa11.99□□□□□ -0.49
RTP3-201ENST00000296142 NHSQ6T4R5 1651 aa11.99□□□□□ -0.49
RTP3-201ENST00000296142 C11orf95C9JLR9 678 aaPredicted RBP11.99□□□□□ -0.49
RTP3-201ENST00000296142 NME9Q86XW9 330 aa11.99□□□□□ -0.49
RTP3-201ENST00000296142 NFAT5O94916 1531 aa11.99□□□□□ -0.49
RTP3-201ENST00000296142 TUBGCP6Q96RT7 1819 aa11.99□□□□□ -0.49
RTP3-201ENST00000296142 MON2Q7Z3U7 1717 aa11.98□□□□□ -0.49
RTP3-201ENST00000296142 KTN1Q86UP2 1357 aaKnown RBP11.98□□□□□ -0.49
RTP3-201ENST00000296142 BRD4O60885 1362 aaPredicted RBP11.97□□□□□ -0.49
RTP3-201ENST00000296142 ZNF827Q17R98 1081 aa11.97□□□□□ -0.49
RTP3-201ENST00000296142 PELP1Q8IZL8 1130 aaKnown RBP11.97□□□□□ -0.49
RTP3-201ENST00000296142 KCNH5Q8NCM2 988 aa11.97□□□□□ -0.49
RTP3-201ENST00000296142 CDCA7Q9BWT1 371 aaPredicted RBP11.97□□□□□ -0.49
RTP3-201ENST00000296142 TNS2Q63HR2 1409 aa11.97□□□□□ -0.49
RTP3-201ENST00000296142 ROCK2O75116 1388 aaKnown RBP11.97□□□□□ -0.49
RTP3-201ENST00000296142 LTV1Q96GA3 475 aaPredicted RBP11.96□□□□□ -0.49
RTP3-201ENST00000296142 SGIP1Q9BQI5 828 aa11.96□□□□□ -0.49
RTP3-201ENST00000296142 LRRC4BQ9NT99 713 aa11.96□□□□□ -0.49
RTP3-201ENST00000296142 SENP3-EIF4A1A0A087X0R7 540 aa11.95□□□□□ -0.5
RTP3-201ENST00000296142 TMC1Q8TDI8 760 aa11.95□□□□□ -0.5
RTP3-201ENST00000296142 ARXQ96QS3 562 aa11.95□□□□□ -0.5
RTP3-201ENST00000296142 ZNF692Q9BU19 519 aaPredicted RBP11.95□□□□□ -0.5
RTP3-201ENST00000296142 MTFR1LQ9H019 292 aa11.95□□□□□ -0.5
RTP3-201ENST00000296142 TTC21AQ8NDW8 1320 aa11.94□□□□□ -0.5
RTP3-201ENST00000296142 PAPPAQ13219 1627 aa11.94□□□□□ -0.5
RTP3-201ENST00000296142 BCL9O00512 1426 aa11.94□□□□□ -0.5
RTP3-201ENST00000296142 FBLN1P23142 703 aa11.94□□□□□ -0.5
RTP3-201ENST00000296142 DDX54Q8TDD1 881 aaKnown RBP11.94□□□□□ -0.5
RTP3-201ENST00000296142 CCDC7Q96M83 1385 aa11.94□□□□□ -0.5
RTP3-201ENST00000296142 GOLGB1Q14789 3259 aaKnown RBP11.94□□□□□ -0.5
RTP3-201ENST00000296142 IL2RBP14784 551 aa11.93□□□□□ -0.5
RTP3-201ENST00000296142 GPR162Q16538 588 aa11.93□□□□□ -0.5
RTP3-201ENST00000296142 ANKRD24Q8TF21 1146 aa11.93□□□□□ -0.5
RTP3-201ENST00000296142 SYTL4Q96C24 671 aaPredicted RBP11.92□□□□□ -0.5
RTP3-201ENST00000296142 SLC12A5Q9H2X9 1139 aa11.92□□□□□ -0.5
RTP3-201ENST00000296142 ERBB3P21860 1342 aa11.92□□□□□ -0.5
RTP3-201ENST00000296142 ABCC6O95255 1503 aa11.91□□□□□ -0.5
RTP3-201ENST00000296142 DOT1LQ8TEK3 1739 aa11.91□□□□□ -0.5
RTP3-201ENST00000296142 ZNF316A6NFI3 1004 aaPredicted RBP11.9□□□□□ -0.5
RTP3-201ENST00000296142 NLGN2Q8NFZ4 835 aa11.9□□□□□ -0.5
RTP3-201ENST00000296142 CD163L1Q9NR16 1453 aa11.9□□□□□ -0.5
RTP3-201ENST00000296142 SBNO2Q9Y2G9 1366 aa11.89□□□□□ -0.51
RTP3-201ENST00000296142 C1QTNF8P60827 252 aa11.89□□□□□ -0.51
RTP3-201ENST00000296142 SHANK3Q9BYB0 1731 aa11.88□□□□□ -0.51
RTP3-201ENST00000296142 MSH5O43196 834 aa11.88□□□□□ -0.51
RTP3-201ENST00000296142 PRIM1P49642 420 aaKnown RBP11.88□□□□□ -0.51
RTP3-201ENST00000296142 AKT1S1Q96B36 256 aa11.88□□□□□ -0.51
RTP3-201ENST00000296142 TFCP2L1Q9NZI6 479 aa11.88□□□□□ -0.51
RTP3-201ENST00000296142 USP54Q70EL1 1684 aa11.88□□□□□ -0.51
RTP3-201ENST00000296142 PNPLA7Q6ZV29 1317 aa11.88□□□□□ -0.51
RTP3-201ENST00000296142 QSER1Q2KHR3 1735 aa11.88□□□□□ -0.51
RTP3-201ENST00000296142 USP31Q70CQ4 1352 aa11.88□□□□□ -0.51
RTP3-201ENST00000296142 MSL1Q68DK7 614 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms