RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 NCBP3Q53F19 620 aaKnown RBP18.13■□□□□ 0.49
CCNF-201ENST00000293968 OTUD7AQ8TE49 926 aaPredicted RBP18.13■□□□□ 0.49
CCNF-201ENST00000293968 EFCAB6Q5THR3 1501 aa18.13■□□□□ 0.49
CCNF-201ENST00000293968 QRICH2Q9H0J4 1663 aa18.12■□□□□ 0.49
CCNF-201ENST00000293968 PKP1Q13835 747 aa18.12■□□□□ 0.49
CCNF-201ENST00000293968 RBM27Q9P2N5 1060 aaKnown RBP18.12■□□□□ 0.49
CCNF-201ENST00000293968 CHAMP1Q96JM3 812 aa18.12■□□□□ 0.49
CCNF-201ENST00000293968 GSPT1P15170 499 aaKnown RBP18.12■□□□□ 0.49
CCNF-201ENST00000293968 ST18O60284 1047 aa18.12■□□□□ 0.49
CCNF-201ENST00000293968 KLHL40Q2TBA0 621 aa18.12■□□□□ 0.49
CCNF-201ENST00000293968 MROH2AA6NES4 1674 aa18.11■□□□□ 0.49
CCNF-201ENST00000293968 NUCB2P80303 420 aa18.11■□□□□ 0.49
CCNF-201ENST00000293968 SLC4A10Q6U841 1118 aa18.11■□□□□ 0.49
CCNF-201ENST00000293968 ZSCAN30Q86W11 494 aa18.11■□□□□ 0.49
CCNF-201ENST00000293968 POLKQ9UBT6 870 aa18.11■□□□□ 0.49
CCNF-201ENST00000293968 R3HCC1Q9Y3T6 440 aaKnown RBP18.11■□□□□ 0.49
CCNF-201ENST00000293968 RRS1Q15050 365 aaKnown RBP18.11■□□□□ 0.49
CCNF-201ENST00000293968 INTS3Q68E01 1043 aaKnown RBP18.11■□□□□ 0.49
CCNF-201ENST00000293968 WAPLQ7Z5K2 1190 aa18.11■□□□□ 0.49
CCNF-201ENST00000293968 RNF214Q8ND24 703 aa18.11■□□□□ 0.49
CCNF-201ENST00000293968 PLEKHM2Q8IWE5 1019 aa18.1■□□□□ 0.49
CCNF-201ENST00000293968 ZGPATQ8N5A5 531 aaKnown RBP18.1■□□□□ 0.49
CCNF-201ENST00000293968 ZRANB1Q9UGI0 708 aa18.1■□□□□ 0.49
CCNF-201ENST00000293968 PTMAP06454 111 aaKnown RBP18.09■□□□□ 0.49
CCNF-201ENST00000293968 PKNOX2Q96KN3 472 aa18.09■□□□□ 0.49
CCNF-201ENST00000293968 KRT24Q2M2I5 525 aa18.09■□□□□ 0.49
CCNF-201ENST00000293968 PUS7Q96PZ0 661 aaKnown RBP18.09■□□□□ 0.49
CCNF-201ENST00000293968 FAM13BQ9NYF5 915 aa18.09■□□□□ 0.49
CCNF-201ENST00000293968 NRXN1Q9ULB1 1477 aa18.09■□□□□ 0.49
CCNF-201ENST00000293968 NCOA3Q9Y6Q9 1424 aa18.09■□□□□ 0.49
CCNF-201ENST00000293968 ZNF428Q96B54 188 aa18.09■□□□□ 0.49
CCNF-201ENST00000293968 ZMYND15Q9H091 742 aa18.09■□□□□ 0.49
CCNF-201ENST00000293968 TULP4Q9NRJ4 1543 aa18.08■□□□□ 0.49
CCNF-201ENST00000293968 ZSCAN23Q3MJ62 389 aa18.08■□□□□ 0.49
CCNF-201ENST00000293968 NME9Q86XW9 330 aa18.08■□□□□ 0.48
CCNF-201ENST00000293968 PPRC1Q5VV67 1664 aaKnown RBP18.08■□□□□ 0.48
CCNF-201ENST00000293968 IFT57Q9NWB7 429 aa18.08■□□□□ 0.48
CCNF-201ENST00000293968 TTC22Q5TAA0 569 aa18.07■□□□□ 0.48
CCNF-201ENST00000293968 DEPDC5O75140 1603 aa18.07■□□□□ 0.48
CCNF-201ENST00000293968 TPM2P07951 284 aa18.07■□□□□ 0.48
CCNF-201ENST00000293968 ADGRB3O60242 1522 aa18.07■□□□□ 0.48
CCNF-201ENST00000293968 VWDEQ8N2E2 1590 aa18.06■□□□□ 0.48
CCNF-201ENST00000293968 XPCQ01831 940 aaPredicted RBP18.06■□□□□ 0.48
CCNF-201ENST00000293968 ARHGAP45Q92619 1136 aa18.06■□□□□ 0.48
CCNF-201ENST00000293968 ASXL2Q76L83 1435 aa18.06■□□□□ 0.48
CCNF-201ENST00000293968 MPNDQ8N594 471 aa18.06■□□□□ 0.48
CCNF-201ENST00000293968 ADGRB1O14514 1584 aa18.06■□□□□ 0.48
CCNF-201ENST00000293968 SDSP20132 328 aa18.05■□□□□ 0.48
CCNF-201ENST00000293968 PRIM1P49642 420 aaKnown RBP18.05■□□□□ 0.48
CCNF-201ENST00000293968 LMOD3Q0VAK6 560 aa18.05■□□□□ 0.48
CCNF-201ENST00000293968 UHRF1BP1LA0JNW5 1464 aa18.05■□□□□ 0.48
CCNF-201ENST00000293968 SYCE3A1L190 88 aa18.05■□□□□ 0.48
CCNF-201ENST00000293968 NEK4P51957 841 aa18.05■□□□□ 0.48
CCNF-201ENST00000293968 TSHZ3Q63HK5 1081 aa18.05■□□□□ 0.48
CCNF-201ENST00000293968 USP26Q9BXU7 913 aa18.05■□□□□ 0.48
CCNF-201ENST00000293968 RBSNQ9H1K0 784 aa18.05■□□□□ 0.48
CCNF-201ENST00000293968 SETBP1Q9Y6X0 1596 aa18.04■□□□□ 0.48
CCNF-201ENST00000293968 NUTM2FA1L443 756 aa18.04■□□□□ 0.48
CCNF-201ENST00000293968 FBXO31Q5XUX0 539 aaPredicted RBP18.04■□□□□ 0.48
CCNF-201ENST00000293968 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.04■□□□□ 0.48
CCNF-201ENST00000293968 INO80Q9ULG1 1556 aaPredicted RBP18.04■□□□□ 0.48
CCNF-201ENST00000293968 REC8O95072 547 aa18.03■□□□□ 0.48
CCNF-201ENST00000293968 CFAP44Q96MT7 982 aa18.03■□□□□ 0.48
CCNF-201ENST00000293968 COG3Q96JB2 828 aa18.03■□□□□ 0.48
CCNF-201ENST00000293968 DNTTIP2Q5QJE6 756 aaKnown RBP18.02■□□□□ 0.48
CCNF-201ENST00000293968 MCM10Q7L590 875 aa18.02■□□□□ 0.48
CCNF-201ENST00000293968 DCTPP1Q9H773 170 aa18.02■□□□□ 0.48
CCNF-201ENST00000293968 MIS18AQ9NYP9 233 aa18.02■□□□□ 0.48
CCNF-201ENST00000293968 MROH1Q8NDA8 1641 aa18.02■□□□□ 0.48
CCNF-201ENST00000293968 TRIM6-TRIM34B2RNG4 842 aa18.02■□□□□ 0.48
CCNF-201ENST00000293968 LMBRD1Q9NUN5 540 aa18.02■□□□□ 0.48
CCNF-201ENST00000293968 GLI2P10070 1586 aa18.02■□□□□ 0.48
CCNF-201ENST00000293968 ABCC4O15439 1325 aa18.02■□□□□ 0.48
CCNF-201ENST00000293968 RILPL2Q969X0 211 aa18.01■□□□□ 0.47
CCNF-201ENST00000293968 MYO3AQ8NEV4 1616 aa18.01■□□□□ 0.47
CCNF-201ENST00000293968 MEIS3Q99687 375 aa18.01■□□□□ 0.47
CCNF-201ENST00000293968 ADGRB2O60241 1585 aa18.01■□□□□ 0.47
CCNF-201ENST00000293968 ABCF1Q8NE71 845 aaKnown RBP eCLIP18■□□□□ 0.47
CCNF-201ENST00000293968 PPP1R9BQ96SB3 815 aa18■□□□□ 0.47
CCNF-201ENST00000293968 NCKAP5LQ9HCH0 1330 aa18■□□□□ 0.47
CCNF-201ENST00000293968 SULT6B1Q6IMI4 303 aa18■□□□□ 0.47
CCNF-201ENST00000293968 SLC52A1Q9NWF4 448 aa18■□□□□ 0.47
CCNF-201ENST00000293968 MLECQ14165 292 aa17.99■□□□□ 0.47
CCNF-201ENST00000293968 NECTIN2Q92692 538 aa17.99■□□□□ 0.47
CCNF-201ENST00000293968 PLCB2Q00722 1185 aa17.99■□□□□ 0.47
CCNF-201ENST00000293968 AEBP1Q8IUX7 1158 aa17.99■□□□□ 0.47
CCNF-201ENST00000293968 CWC22Q9HCG8 908 aaKnown RBP17.99■□□□□ 0.47
CCNF-201ENST00000293968 SLC4A2P04920 1241 aa17.99■□□□□ 0.47
CCNF-201ENST00000293968 ANO2Q9NQ90 1003 aa17.99■□□□□ 0.47
CCNF-201ENST00000293968 F6X3S4 739 aa17.98■□□□□ 0.47
CCNF-201ENST00000293968 ERC2O15083 957 aa17.98■□□□□ 0.47
CCNF-201ENST00000293968 EXOC6BQ9Y2D4 811 aa17.98■□□□□ 0.47
CCNF-201ENST00000293968 ANKRD44Q8N8A2 993 aa17.98■□□□□ 0.47
CCNF-201ENST00000293968 HMMRO75330 724 aa17.98■□□□□ 0.47
CCNF-201ENST00000293968 OFD1O75665 1012 aa17.98■□□□□ 0.47
CCNF-201ENST00000293968 ARAP3Q8WWN8 1544 aa17.97■□□□□ 0.47
CCNF-201ENST00000293968 IL13P35225 146 aa17.97■□□□□ 0.47
CCNF-201ENST00000293968 CEP85Q6P2H3 762 aa17.97■□□□□ 0.47
CCNF-201ENST00000293968 GPT2Q8TD30 523 aa17.97■□□□□ 0.47
CCNF-201ENST00000293968 COL3A1P02461 1466 aaPredicted RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms