RNA–Protein interactions for RNA: ENST00000290417.6

GFRA4-201, Transcript of GDNF family receptor alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GFRA4, Length 1,427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA4-201ENST00000290417 CARD14Q9BXL6 1004 aa31.33■■■□□ 2.61
GFRA4-201ENST00000290417 NSD3Q9BZ95 1437 aa31.33■■■□□ 2.61
GFRA4-201ENST00000290417 A0A0G2JS52 829 aa31.32■■■□□ 2.61
GFRA4-201ENST00000290417 MYT1Q01538 1121 aa31.32■■■□□ 2.61
GFRA4-201ENST00000290417 SPATA31A1Q5TZJ5 1347 aa31.32■■■□□ 2.6
GFRA4-201ENST00000290417 ONECUT3O60422 494 aaPredicted RBP31.32■■■□□ 2.6
GFRA4-201ENST00000290417 AXIN2Q9Y2T1 843 aa31.32■■■□□ 2.6
GFRA4-201ENST00000290417 FYB1O15117 783 aa31.31■■■□□ 2.6
GFRA4-201ENST00000290417 GGNBP2Q9H3C7 697 aa31.31■■■□□ 2.6
GFRA4-201ENST00000290417 USP35Q9P2H5 1018 aa31.31■■■□□ 2.6
GFRA4-201ENST00000290417 ABCC6O95255 1503 aa31.27■■■□□ 2.6
GFRA4-201ENST00000290417 UPF1Q92900 1129 aaKnown RBP eCLIP31.25■■■□□ 2.59
GFRA4-201ENST00000290417 THSD7AQ9UPZ6 1657 aa31.25■■■□□ 2.59
GFRA4-201ENST00000290417 CRB1P82279 1406 aa31.25■■■□□ 2.59
GFRA4-201ENST00000290417 KIF7Q2M1P5 1343 aa31.23■■■□□ 2.59
GFRA4-201ENST00000290417 TOM1L2Q6ZVM7 507 aa31.23■■■□□ 2.59
GFRA4-201ENST00000290417 PANK3Q9H999 370 aa31.23■■■□□ 2.59
GFRA4-201ENST00000290417 WDR17Q8IZU2 1322 aa31.22■■■□□ 2.59
GFRA4-201ENST00000290417 FBLN1P23142 703 aa31.22■■■□□ 2.59
GFRA4-201ENST00000290417 TCP11L2Q8N4U5 519 aa31.22■■■□□ 2.59
GFRA4-201ENST00000290417 CSB-PGBD3P0DP91 1061 aa31.21■■■□□ 2.59
GFRA4-201ENST00000290417 CGNL1Q0VF96 1302 aa31.2■■■□□ 2.59
GFRA4-201ENST00000290417 BARGINQ6ZT62 677 aa31.19■■■□□ 2.58
GFRA4-201ENST00000290417 KRT27Q7Z3Y8 459 aa31.19■■■□□ 2.58
GFRA4-201ENST00000290417 THRAP3Q9Y2W1 955 aaKnown RBP31.18■■■□□ 2.58
GFRA4-201ENST00000290417 EP400Q96L91 3159 aa31.17■■■□□ 2.58
GFRA4-201ENST00000290417 MAP3K19Q56UN5 1328 aa31.17■■■□□ 2.58
GFRA4-201ENST00000290417 RRS1Q15050 365 aaKnown RBP31.15■■■□□ 2.58
GFRA4-201ENST00000290417 IP6K1Q92551 441 aa31.15■■■□□ 2.58
GFRA4-201ENST00000290417 AMPHP49418 695 aa31.14■■■□□ 2.58
GFRA4-201ENST00000290417 ANKRD26Q9UPS8 1709 aa31.14■■■□□ 2.57
GFRA4-201ENST00000290417 ERBB3P21860 1342 aa31.13■■■□□ 2.57
GFRA4-201ENST00000290417 WNK3Q9BYP7 1800 aa31.13■■■□□ 2.57
GFRA4-201ENST00000290417 BLMP54132 1417 aaPredicted RBP31.13■■■□□ 2.57
GFRA4-201ENST00000290417 ANKRD24Q8TF21 1146 aa31.12■■■□□ 2.57
GFRA4-201ENST00000290417 CARD10Q9BWT7 1032 aa31.12■■■□□ 2.57
GFRA4-201ENST00000290417 PARP4Q9UKK3 1724 aaKnown RBP31.11■■■□□ 2.57
GFRA4-201ENST00000290417 CCDC7Q96M83 1385 aa31.1■■■□□ 2.57
GFRA4-201ENST00000290417 HOXC9P31274 260 aa31.1■■■□□ 2.57
GFRA4-201ENST00000290417 LTV1Q96GA3 475 aaPredicted RBP31.08■■■□□ 2.57
GFRA4-201ENST00000290417 NLRP2Q9NX02 1062 aa31.08■■■□□ 2.57
GFRA4-201ENST00000290417 FAM182BQ5T319 152 aa31.07■■■□□ 2.57
GFRA4-201ENST00000290417 WASHC2AQ641Q2 1341 aa31.07■■■□□ 2.56
GFRA4-201ENST00000290417 RTL1A6NKG5 1358 aa31.07■■■□□ 2.56
GFRA4-201ENST00000290417 FAM208AQ9UK61 1670 aaKnown RBP31.06■■■□□ 2.56
GFRA4-201ENST00000290417 MAP2P11137 1827 aaKnown RBP31.06■■■□□ 2.56
GFRA4-201ENST00000290417 PDE3BQ13370 1112 aa31.06■■■□□ 2.56
GFRA4-201ENST00000290417 KNSTRNQ9Y448 316 aa31.06■■■□□ 2.56
GFRA4-201ENST00000290417 PEAK1Q9H792 1746 aa31.06■■■□□ 2.56
GFRA4-201ENST00000290417 LRRC37A3O60309 1634 aa31.04■■■□□ 2.56
GFRA4-201ENST00000290417 RGPD2P0DJD1 1756 aa31.02■■■□□ 2.56
GFRA4-201ENST00000290417 NSD2O96028 1365 aa31.02■■■□□ 2.56
GFRA4-201ENST00000290417 TNNT2P45379 298 aaPredicted RBP31.01■■■□□ 2.55
GFRA4-201ENST00000290417 CDCA7Q9BWT1 371 aaPredicted RBP31.01■■■□□ 2.55
GFRA4-201ENST00000290417 EMILIN1Q9Y6C2 1016 aa31.01■■■□□ 2.55
GFRA4-201ENST00000290417 FLT4P35916 1363 aa31■■■□□ 2.55
GFRA4-201ENST00000290417 DDB1Q16531 1140 aa31■■■□□ 2.55
GFRA4-201ENST00000290417 CCDC125Q86Z20 511 aa31■■■□□ 2.55
GFRA4-201ENST00000290417 DISP2A7MBM2 1401 aa30.99■■■□□ 2.55
GFRA4-201ENST00000290417 KIF24Q5T7B8 1368 aa30.99■■■□□ 2.55
GFRA4-201ENST00000290417 PPM1GO15355 546 aaPredicted RBP30.98■■■□□ 2.55
GFRA4-201ENST00000290417 HSP90AB2PQ58FF8 381 aa30.98■■■□□ 2.55
GFRA4-201ENST00000290417 INSRP06213 1382 aa30.96■■■□□ 2.55
GFRA4-201ENST00000290417 FAM196AQ6ZSG2 479 aa30.96■■■□□ 2.55
GFRA4-201ENST00000290417 SMG6Q86US8 1419 aaKnown RBP30.96■■■□□ 2.55
GFRA4-201ENST00000290417 SF3B2Q13435 895 aaKnown RBP30.95■■■□□ 2.54
GFRA4-201ENST00000290417 MORC1Q86VD1 984 aa30.95■■■□□ 2.54
GFRA4-201ENST00000290417 POLKQ9UBT6 870 aa30.94■■■□□ 2.54
GFRA4-201ENST00000290417 RGPD1P0DJD0 1748 aa30.94■■■□□ 2.54
GFRA4-201ENST00000290417 IL2RBP14784 551 aa30.93■■■□□ 2.54
GFRA4-201ENST00000290417 AMER1Q5JTC6 1135 aaPredicted RBP30.93■■■□□ 2.54
GFRA4-201ENST00000290417 PER1O15534 1290 aaPredicted RBP30.92■■■□□ 2.54
GFRA4-201ENST00000290417 EXOC5O00471 708 aa30.91■■■□□ 2.54
GFRA4-201ENST00000290417 NBPF6Q5VWK0 638 aa30.89■■■□□ 2.53
GFRA4-201ENST00000290417 NBPF4Q96M43 638 aa30.89■■■□□ 2.53
GFRA4-201ENST00000290417 OVOS2A0A0G2JMS6 1433 aa30.89■■■□□ 2.53
GFRA4-201ENST00000290417 TNS2Q63HR2 1409 aa30.89■■■□□ 2.53
GFRA4-201ENST00000290417 TRIM37O94972 964 aa30.88■■■□□ 2.53
GFRA4-201ENST00000290417 TNS1Q9HBL0 1735 aaKnown RBP30.88■■■□□ 2.53
GFRA4-201ENST00000290417 USHBP1Q8N6Y0 703 aa30.87■■■□□ 2.53
GFRA4-201ENST00000290417 MARCH10Q8NA82 808 aaPredicted RBP30.87■■■□□ 2.53
GFRA4-201ENST00000290417 CC2D1BQ5T0F9 858 aaKnown RBP30.86■■■□□ 2.53
GFRA4-201ENST00000290417 DEFB132Q7Z7B7 95 aa30.86■■■□□ 2.53
GFRA4-201ENST00000290417 SBF2Q86WG5 1849 aa30.84■■■□□ 2.53
GFRA4-201ENST00000290417 CNGB1Q14028 1251 aaPredicted RBP30.83■■■□□ 2.53
GFRA4-201ENST00000290417 ZEB1P37275 1124 aaPredicted RBP30.82■■■□□ 2.52
GFRA4-201ENST00000290417 BAG6P46379 1132 aa30.81■■■□□ 2.52
GFRA4-201ENST00000290417 MEGF6O75095 1541 aa30.8■■■□□ 2.52
GFRA4-201ENST00000290417 NPC1L1Q9UHC9 1359 aa30.78■■■□□ 2.52
GFRA4-201ENST00000290417 EIF4A2Q14240 407 aaKnown RBP30.77■■■□□ 2.52
GFRA4-201ENST00000290417 RAPGEF4Q8WZA2 1011 aa30.77■■■□□ 2.52
GFRA4-201ENST00000290417 APBA3O96018 575 aa30.75■■■□□ 2.51
GFRA4-201ENST00000290417 EN1Q05925 392 aaPredicted RBP30.75■■■□□ 2.51
GFRA4-201ENST00000290417 BCL9O00512 1426 aa30.75■■■□□ 2.51
GFRA4-201ENST00000290417 SHANK3Q9BYB0 1731 aa30.75■■■□□ 2.51
GFRA4-201ENST00000290417 DDX54Q8TDD1 881 aaKnown RBP30.74■■■□□ 2.51
GFRA4-201ENST00000290417 EYA1Q99502 592 aa30.74■■■□□ 2.51
GFRA4-201ENST00000290417 TATP17735 454 aaPredicted RBP30.73■■■□□ 2.51
GFRA4-201ENST00000290417 ZCRB1Q8TBF4 217 aaKnown RBP30.73■■■□□ 2.51
GFRA4-201ENST00000290417 NCAPD2Q15021 1401 aa30.72■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms