RNA–Protein interactions for RNA: ENST00000289957.2

CHRNB3-201, Transcript of cholinergic receptor nicotinic beta 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB3, Length 2,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3-201ENST00000289957 AHDC1Q5TGY3 1603 aaPredicted RBP15.23■□□□□ 0.03
CHRNB3-201ENST00000289957 AMPHP49418 695 aa15.22■□□□□ 0.03
CHRNB3-201ENST00000289957 HOXC9P31274 260 aa15.22■□□□□ 0.03
CHRNB3-201ENST00000289957 EIF4A2Q14240 407 aaKnown RBP15.22■□□□□ 0.03
CHRNB3-201ENST00000289957 CDK12Q9NYV4 1490 aaPredicted RBP15.21■□□□□ 0.03
CHRNB3-201ENST00000289957 HMOX1P09601 288 aa15.21■□□□□ 0.03
CHRNB3-201ENST00000289957 PPP4R2Q9NY27 417 aa15.21■□□□□ 0.03
CHRNB3-201ENST00000289957 FANCIQ9NVI1 1328 aa15.21■□□□□ 0.03
CHRNB3-201ENST00000289957 IL13P35225 146 aa15.2■□□□□ 0.02
CHRNB3-201ENST00000289957 WDR43Q15061 677 aaKnown RBP eCLIP15.2■□□□□ 0.02
CHRNB3-201ENST00000289957 ARHGEF25Q86VW2 580 aa15.2■□□□□ 0.02
CHRNB3-201ENST00000289957 RGPD5Q99666 1765 aa15.2■□□□□ 0.02
CHRNB3-201ENST00000289957 KIAA0232Q92628 1395 aa15.2■□□□□ 0.02
CHRNB3-201ENST00000289957 DIAPH1O60610 1272 aaKnown RBP15.2■□□□□ 0.02
CHRNB3-201ENST00000289957 U2AF1L5P0DN76 240 aaPredicted RBP15.2■□□□□ 0.02
CHRNB3-201ENST00000289957 U2AF1Q01081 240 aaKnown RBP eCLIP15.2■□□□□ 0.02
CHRNB3-201ENST00000289957 AEBP1Q8IUX7 1158 aa15.2■□□□□ 0.02
CHRNB3-201ENST00000289957 ABCA3Q99758 1704 aa15.2■□□□□ 0.02
CHRNB3-201ENST00000289957 ARHGEF10O15013 1369 aa15.2■□□□□ 0.02
CHRNB3-201ENST00000289957 CFAP53Q96M91 514 aa15.19■□□□□ 0.02
CHRNB3-201ENST00000289957 USHBP1Q8N6Y0 703 aa15.19■□□□□ 0.02
CHRNB3-201ENST00000289957 FLT4P35916 1363 aa15.19■□□□□ 0.02
CHRNB3-201ENST00000289957 LRRC59Q96AG4 307 aaKnown RBP15.18■□□□□ 0.02
CHRNB3-201ENST00000289957 KCNH5Q8NCM2 988 aa15.18■□□□□ 0.02
CHRNB3-201ENST00000289957 HSPA1LP34931 641 aa15.17■□□□□ 0.02
CHRNB3-201ENST00000289957 INSRP06213 1382 aa15.17■□□□□ 0.02
CHRNB3-201ENST00000289957 RGPD2P0DJD1 1756 aa15.17■□□□□ 0.02
CHRNB3-201ENST00000289957 IQSEC2Q5JU85 1478 aa15.17■□□□□ 0.02
CHRNB3-201ENST00000289957 RRP7AQ9Y3A4 280 aaKnown RBP15.17■□□□□ 0.02
CHRNB3-201ENST00000289957 NUTM2BA6NNL0 878 aaPredicted RBP15.16■□□□□ 0.02
CHRNB3-201ENST00000289957 NUTM2EB1AL46 878 aaPredicted RBP15.16■□□□□ 0.02
CHRNB3-201ENST00000289957 HAP1P54257 671 aaPredicted RBP15.16■□□□□ 0.02
CHRNB3-201ENST00000289957 NUTM2AQ8IVF1 878 aaPredicted RBP15.16■□□□□ 0.02
CHRNB3-201ENST00000289957 IP6K1Q92551 441 aa15.15■□□□□ 0.02
CHRNB3-201ENST00000289957 BLMP54132 1417 aaPredicted RBP15.15■□□□□ 0.02
CHRNB3-201ENST00000289957 RNF123Q5XPI4 1314 aa15.15■□□□□ 0.02
CHRNB3-201ENST00000289957 COL18A1P39060 1754 aa15.14■□□□□ 0.01
CHRNB3-201ENST00000289957 ADAMTS2O95450 1211 aa15.14■□□□□ 0.01
CHRNB3-201ENST00000289957 EYA1Q99502 592 aa15.14■□□□□ 0.01
CHRNB3-201ENST00000289957 FAM83GA6ND36 823 aa15.14■□□□□ 0.01
CHRNB3-201ENST00000289957 APAF1O14727 1248 aa15.14■□□□□ 0.01
CHRNB3-201ENST00000289957 PHACTR3Q96KR7 559 aa15.14■□□□□ 0.01
CHRNB3-201ENST00000289957 NEUROD2Q15784 382 aa15.13■□□□□ 0.01
CHRNB3-201ENST00000289957 NBPF6Q5VWK0 638 aa15.13■□□□□ 0.01
CHRNB3-201ENST00000289957 SULT6B1Q6IMI4 303 aa15.13■□□□□ 0.01
CHRNB3-201ENST00000289957 NBPF4Q96M43 638 aa15.13■□□□□ 0.01
CHRNB3-201ENST00000289957 PRDM11Q9NQV5 511 aa15.13■□□□□ 0.01
CHRNB3-201ENST00000289957 PLEKHF1Q96S99 279 aa15.13■□□□□ 0.01
CHRNB3-201ENST00000289957 RSPH6AQ9H0K4 717 aa15.13■□□□□ 0.01
CHRNB3-201ENST00000289957 RGPD1P0DJD0 1748 aa15.12■□□□□ 0.01
CHRNB3-201ENST00000289957 PRKAR2BP31323 418 aa15.12■□□□□ 0.01
CHRNB3-201ENST00000289957 CAMTA1Q9Y6Y1 1673 aa15.12■□□□□ 0.01
CHRNB3-201ENST00000289957 ANKRD24Q8TF21 1146 aa15.12■□□□□ 0.01
CHRNB3-201ENST00000289957 NUDCQ9Y266 331 aa15.11■□□□□ 0.01
CHRNB3-201ENST00000289957 COL22A1Q8NFW1 1626 aaPredicted RBP15.1■□□□□ 0.01
CHRNB3-201ENST00000289957 RTL1A6NKG5 1358 aa15.1■□□□□ 0.01
CHRNB3-201ENST00000289957 CPDO75976 1380 aa15.1■□□□□ 0.01
CHRNB3-201ENST00000289957 ERBB3P21860 1342 aa15.09■□□□□ 0.01
CHRNB3-201ENST00000289957 TCP11L2Q8N4U5 519 aa15.09■□□□□ 0.01
CHRNB3-201ENST00000289957 IGSF1Q8N6C5 1336 aa15.08■□□□□ 0.01
CHRNB3-201ENST00000289957 STRN4Q9NRL3 753 aa15.08■□□□□ 0
CHRNB3-201ENST00000289957 LMO7Q8WWI1 1683 aa15.08■□□□□ 0
CHRNB3-201ENST00000289957 LRP6O75581 1613 aa15.07■□□□□ 0
CHRNB3-201ENST00000289957 RUNDC1Q96C34 613 aa15.07■□□□□ 0
CHRNB3-201ENST00000289957 BTG4Q9NY30 223 aa15.07■□□□□ 0
CHRNB3-201ENST00000289957 KIF24Q5T7B8 1368 aa15.07■□□□□ 0
CHRNB3-201ENST00000289957 CDCA7LQ96GN5 454 aa15.06■□□□□ 0
CHRNB3-201ENST00000289957 IRX6P78412 446 aaPredicted RBP15.06■□□□□ 0
CHRNB3-201ENST00000289957 LARP1Q6PKG0 1096 aaKnown RBP15.06■□□□□ 0
CHRNB3-201ENST00000289957 FCHSD2O94868 740 aa15.05■□□□□ 0
CHRNB3-201ENST00000289957 SPINK5Q9NQ38 1064 aaPredicted RBP15.05■□□□□ 0
CHRNB3-201ENST00000289957 NLRP2Q9NX02 1062 aa15.05■□□□□ 0
CHRNB3-201ENST00000289957 USP35Q9P2H5 1018 aa15.05■□□□□ 0
CHRNB3-201ENST00000289957 COL5A2P05997 1499 aaPredicted RBP15.05■□□□□ 0
CHRNB3-201ENST00000289957 CSB-PGBD3P0DP91 1061 aa15.05■□□□□ -0
CHRNB3-201ENST00000289957 THUMPD2Q9BTF0 503 aaKnown RBP15.04■□□□□ -0
CHRNB3-201ENST00000289957 JCADQ9P266 1359 aa15.04■□□□□ -0
CHRNB3-201ENST00000289957 KDRP35968 1356 aa15.03■□□□□ -0
CHRNB3-201ENST00000289957 TMPOP42166 694 aaKnown RBP15.03■□□□□ -0
CHRNB3-201ENST00000289957 DCTN1Q14203 1278 aa15.03■□□□□ -0
CHRNB3-201ENST00000289957 C8orf37Q96NL8 207 aa15.03■□□□□ -0
CHRNB3-201ENST00000289957 MSH5O43196 834 aa15.02□□□□□ -0.01
CHRNB3-201ENST00000289957 FAM208AQ9UK61 1670 aaKnown RBP15.02□□□□□ -0.01
CHRNB3-201ENST00000289957 MTHFSDQ2M296 383 aaKnown RBP15.01□□□□□ -0.01
CHRNB3-201ENST00000289957 TRIM35Q9UPQ4 493 aa15.01□□□□□ -0.01
CHRNB3-201ENST00000289957 MAPK8IP3Q9UPT6 1336 aa15.01□□□□□ -0.01
CHRNB3-201ENST00000289957 PLCH1Q4KWH8 1693 aa15.01□□□□□ -0.01
CHRNB3-201ENST00000289957 EP400Q96L91 3159 aa15.01□□□□□ -0.01
CHRNB3-201ENST00000289957 TOM1L2Q6ZVM7 507 aa15.01□□□□□ -0.01
CHRNB3-201ENST00000289957 DLG5Q8TDM6 1919 aa15□□□□□ -0.01
CHRNB3-201ENST00000289957 MEGF6O75095 1541 aa15□□□□□ -0.01
CHRNB3-201ENST00000289957 ZNF521Q96K83 1311 aa15□□□□□ -0.01
CHRNB3-201ENST00000289957 RIPK4P57078 832 aa15□□□□□ -0.01
CHRNB3-201ENST00000289957 WDR17Q8IZU2 1322 aa15□□□□□ -0.01
CHRNB3-201ENST00000289957 WWC1Q8IX03 1113 aa15□□□□□ -0.01
CHRNB3-201ENST00000289957 EVA1CP58658 441 aa14.99□□□□□ -0.01
CHRNB3-201ENST00000289957 COL14A1Q05707 1796 aaKnown RBP14.99□□□□□ -0.01
CHRNB3-201ENST00000289957 NCAPD2Q15021 1401 aa14.98□□□□□ -0.01
CHRNB3-201ENST00000289957 NFE2L2Q16236 605 aa14.97□□□□□ -0.01
CHRNB3-201ENST00000289957 MCM10Q7L590 875 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms