RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 NUTM2BA6NNL0 878 aaPredicted RBP29.32■■■□□ 2.28
PDLIM3-203ENST00000284771 NUTM2EB1AL46 878 aaPredicted RBP29.32■■■□□ 2.28
PDLIM3-203ENST00000284771 NUTM2AQ8IVF1 878 aaPredicted RBP29.32■■■□□ 2.28
PDLIM3-203ENST00000284771 FAM83GA6ND36 823 aa29.31■■■□□ 2.28
PDLIM3-203ENST00000284771 RTL1A6NKG5 1358 aa29.29■■■□□ 2.28
PDLIM3-203ENST00000284771 PNISRQ8TF01 805 aaKnown RBP29.29■■■□□ 2.28
PDLIM3-203ENST00000284771 PRDM11Q9NQV5 511 aa29.29■■■□□ 2.28
PDLIM3-203ENST00000284771 RGPD5Q99666 1765 aa29.29■■■□□ 2.28
PDLIM3-203ENST00000284771 CFAP53Q96M91 514 aa29.28■■■□□ 2.28
PDLIM3-203ENST00000284771 SPATA31A6Q5VVP1 1343 aa29.28■■■□□ 2.28
PDLIM3-203ENST00000284771 ADAMTS2O95450 1211 aa29.28■■■□□ 2.28
PDLIM3-203ENST00000284771 IL13P35225 146 aa29.26■■■□□ 2.27
PDLIM3-203ENST00000284771 EIF4A2Q14240 407 aaKnown RBP29.26■■■□□ 2.27
PDLIM3-203ENST00000284771 LRP6O75581 1613 aa29.25■■■□□ 2.27
PDLIM3-203ENST00000284771 DIAPH1O60610 1272 aaKnown RBP29.25■■■□□ 2.27
PDLIM3-203ENST00000284771 LMO7Q8WWI1 1683 aa29.24■■■□□ 2.27
PDLIM3-203ENST00000284771 CAMTA1Q9Y6Y1 1673 aa29.24■■■□□ 2.27
PDLIM3-203ENST00000284771 BLMP54132 1417 aaPredicted RBP29.22■■■□□ 2.27
PDLIM3-203ENST00000284771 LTV1Q96GA3 475 aaPredicted RBP29.21■■■□□ 2.27
PDLIM3-203ENST00000284771 ABCC6O95255 1503 aa29.2■■■□□ 2.27
PDLIM3-203ENST00000284771 FAM9BQ8IZU0 186 aa29.19■■■□□ 2.26
PDLIM3-203ENST00000284771 ANKRD24Q8TF21 1146 aa29.18■■■□□ 2.26
PDLIM3-203ENST00000284771 ADAMTS8Q9UP79 889 aa29.18■■■□□ 2.26
PDLIM3-203ENST00000284771 ERBB3P21860 1342 aa29.18■■■□□ 2.26
PDLIM3-203ENST00000284771 COL14A1Q05707 1796 aaKnown RBP29.18■■■□□ 2.26
PDLIM3-203ENST00000284771 BTG4Q9NY30 223 aa29.17■■■□□ 2.26
PDLIM3-203ENST00000284771 U2SURPO15042 1029 aaKnown RBP29.15■■■□□ 2.26
PDLIM3-203ENST00000284771 EYA1Q99502 592 aa29.15■■■□□ 2.26
PDLIM3-203ENST00000284771 NUDCQ9Y266 331 aa29.15■■■□□ 2.26
PDLIM3-203ENST00000284771 RGPD1P0DJD0 1748 aa29.14■■■□□ 2.26
PDLIM3-203ENST00000284771 RGPD2P0DJD1 1756 aa29.14■■■□□ 2.26
PDLIM3-203ENST00000284771 COL5A2P05997 1499 aaPredicted RBP29.14■■■□□ 2.26
PDLIM3-203ENST00000284771 NBPF6Q5VWK0 638 aa29.14■■■□□ 2.26
PDLIM3-203ENST00000284771 NBPF4Q96M43 638 aa29.14■■■□□ 2.26
PDLIM3-203ENST00000284771 U2AF1L5P0DN76 240 aaPredicted RBP29.13■■■□□ 2.25
PDLIM3-203ENST00000284771 U2AF1Q01081 240 aaKnown RBP eCLIP29.13■■■□□ 2.25
PDLIM3-203ENST00000284771 WDR43Q15061 677 aaKnown RBP eCLIP29.12■■■□□ 2.25
PDLIM3-203ENST00000284771 PLCH1Q4KWH8 1693 aa29.12■■■□□ 2.25
PDLIM3-203ENST00000284771 C8orf37Q96NL8 207 aa29.12■■■□□ 2.25
PDLIM3-203ENST00000284771 SLIT2O94813 1529 aa29.11■■■□□ 2.25
PDLIM3-203ENST00000284771 IGSF1Q8N6C5 1336 aa29.1■■■□□ 2.25
PDLIM3-203ENST00000284771 HMOX1P09601 288 aa29.09■■■□□ 2.25
PDLIM3-203ENST00000284771 AEBP1Q8IUX7 1158 aa29.09■■■□□ 2.25
PDLIM3-203ENST00000284771 NGLY1Q96IV0 654 aa29.09■■■□□ 2.25
PDLIM3-203ENST00000284771 STRN4Q9NRL3 753 aa29.09■■■□□ 2.25
PDLIM3-203ENST00000284771 WDR17Q8IZU2 1322 aa29.08■■■□□ 2.25
PDLIM3-203ENST00000284771 LARP1Q6PKG0 1096 aaKnown RBP29.08■■■□□ 2.25
PDLIM3-203ENST00000284771 USHBP1Q8N6Y0 703 aa29.08■■■□□ 2.25
PDLIM3-203ENST00000284771 CSB-PGBD3P0DP91 1061 aa29.07■■■□□ 2.24
PDLIM3-203ENST00000284771 SULT6B1Q6IMI4 303 aa29.07■■■□□ 2.24
PDLIM3-203ENST00000284771 FNBP4Q8N3X1 1017 aaPredicted RBP29.07■■■□□ 2.24
PDLIM3-203ENST00000284771 EVA1CP58658 441 aa29.06■■■□□ 2.24
PDLIM3-203ENST00000284771 NRAPQ86VF7 1730 aa29.05■■■□□ 2.24
PDLIM3-203ENST00000284771 BCL9LQ86UU0 1499 aa29.05■■■□□ 2.24
PDLIM3-203ENST00000284771 NWD2Q9ULI1 1742 aa29.05■■■□□ 2.24
PDLIM3-203ENST00000284771 RSPH6AQ9H0K4 717 aa29.05■■■□□ 2.24
PDLIM3-203ENST00000284771 NLRP2Q9NX02 1062 aa29.05■■■□□ 2.24
PDLIM3-203ENST00000284771 MEX3CQ5U5Q3 659 aaKnown RBP29.04■■■□□ 2.24
PDLIM3-203ENST00000284771 KDRP35968 1356 aa29.04■■■□□ 2.24
PDLIM3-203ENST00000284771 NCAPD2Q15021 1401 aa29.03■■■□□ 2.24
PDLIM3-203ENST00000284771 FCHSD2O94868 740 aa29.03■■■□□ 2.24
PDLIM3-203ENST00000284771 TOM1L2Q6ZVM7 507 aa29.02■■■□□ 2.24
PDLIM3-203ENST00000284771 CCDC146Q8IYE0 955 aa29.02■■■□□ 2.24
PDLIM3-203ENST00000284771 PLEKHF1Q96S99 279 aa29.02■■■□□ 2.24
PDLIM3-203ENST00000284771 FAM208AQ9UK61 1670 aaKnown RBP29.02■■■□□ 2.24
PDLIM3-203ENST00000284771 ILDR1Q86SU0 546 aaPredicted RBP29■■■□□ 2.23
PDLIM3-203ENST00000284771 UNC5CLQ8IV45 518 aa29■■■□□ 2.23
PDLIM3-203ENST00000284771 PRKAR2BP31323 418 aa28.99■■■□□ 2.23
PDLIM3-203ENST00000284771 CRB1P82279 1406 aa28.99■■■□□ 2.23
PDLIM3-203ENST00000284771 SENP3-EIF4A1A0A087X0R7 540 aa28.98■■■□□ 2.23
PDLIM3-203ENST00000284771 CARD10Q9BWT7 1032 aa28.98■■■□□ 2.23
PDLIM3-203ENST00000284771 AFF2P51816 1311 aa28.98■■■□□ 2.23
PDLIM3-203ENST00000284771 PHACTR3Q96KR7 559 aa28.97■■■□□ 2.23
PDLIM3-203ENST00000284771 USP21Q9UK80 565 aa28.97■■■□□ 2.23
PDLIM3-203ENST00000284771 USP35Q9P2H5 1018 aa28.96■■■□□ 2.23
PDLIM3-203ENST00000284771 RUNDC1Q96C34 613 aa28.94■■■□□ 2.22
PDLIM3-203ENST00000284771 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.92■■■□□ 2.22
PDLIM3-203ENST00000284771 SPATA31A1Q5TZJ5 1347 aa28.92■■■□□ 2.22
PDLIM3-203ENST00000284771 SPATA31A5Q5VU36 1347 aa28.91■■■□□ 2.22
PDLIM3-203ENST00000284771 SPATA31A7Q8IWB4 1347 aa28.91■■■□□ 2.22
PDLIM3-203ENST00000284771 APAF1O14727 1248 aa28.91■■■□□ 2.22
PDLIM3-203ENST00000284771 VPS72Q15906 364 aa28.91■■■□□ 2.22
PDLIM3-203ENST00000284771 TCP11L2Q8N4U5 519 aa28.89■■■□□ 2.22
PDLIM3-203ENST00000284771 PNNQ9H307 717 aaKnown RBP28.89■■■□□ 2.22
PDLIM3-203ENST00000284771 MEGF6O75095 1541 aa28.89■■■□□ 2.22
PDLIM3-203ENST00000284771 YTHDC1Q96MU7 727 aaKnown RBP28.87■■■□□ 2.21
PDLIM3-203ENST00000284771 RAPGEF4Q8WZA2 1011 aa28.86■■■□□ 2.21
PDLIM3-203ENST00000284771 CCDC9Q9Y3X0 531 aaKnown RBP28.86■■■□□ 2.21
PDLIM3-203ENST00000284771 MAPK8IP3Q9UPT6 1336 aa28.85■■■□□ 2.21
PDLIM3-203ENST00000284771 MTHFSDQ2M296 383 aaKnown RBP28.85■■■□□ 2.21
PDLIM3-203ENST00000284771 RRP7AQ9Y3A4 280 aaKnown RBP28.85■■■□□ 2.21
PDLIM3-203ENST00000284771 IL2RBP14784 551 aa28.83■■■□□ 2.21
PDLIM3-203ENST00000284771 HNRNPUQ00839 825 aaKnown RBP eCLIP28.83■■■□□ 2.21
PDLIM3-203ENST00000284771 DISP2A7MBM2 1401 aa28.83■■■□□ 2.21
PDLIM3-203ENST00000284771 ATRNO75882 1429 aa28.83■■■□□ 2.21
PDLIM3-203ENST00000284771 TMPOP42166 694 aaKnown RBP28.83■■■□□ 2.21
PDLIM3-203ENST00000284771 TATP17735 454 aaPredicted RBP28.82■■■□□ 2.2
PDLIM3-203ENST00000284771 NEUROD2Q15784 382 aa28.82■■■□□ 2.2
PDLIM3-203ENST00000284771 QTRT2Q9H974 415 aaKnown RBP28.82■■■□□ 2.2
PDLIM3-203ENST00000284771 THRAP3Q9Y2W1 955 aaKnown RBP28.82■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms