RNA–Protein interactions for RNA: ENST00000284073.6

MSI2-201, Transcript of musashi RNA binding protein 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene MSI2, Length 6,364 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-201ENST00000284073 SHTN1A0MZ66 631 aa18.68■□□□□ 0.58
MSI2-201ENST00000284073 FERMT3Q86UX7 667 aa18.68■□□□□ 0.58
MSI2-201ENST00000284073 CARMIL2Q6F5E8 1435 aa18.68■□□□□ 0.58
MSI2-201ENST00000284073 GNAI3P08754 354 aa18.68■□□□□ 0.58
MSI2-201ENST00000284073 TWISTNBQ3B726 338 aaPredicted RBP18.68■□□□□ 0.58
MSI2-201ENST00000284073 TMX1Q9H3N1 280 aa18.68■□□□□ 0.58
MSI2-201ENST00000284073 RSPH4AQ5TD94 716 aa18.68■□□□□ 0.58
MSI2-201ENST00000284073 TIGD1Q96MW7 591 aa18.67■□□□□ 0.58
MSI2-201ENST00000284073 CFAP100Q494V2 611 aa18.67■□□□□ 0.58
MSI2-201ENST00000284073 ATF7IPQ6VMQ6 1270 aa18.67■□□□□ 0.58
MSI2-201ENST00000284073 RIC3Q7Z5B4 369 aa18.67■□□□□ 0.58
MSI2-201ENST00000284073 XRCC6P12956 609 aaKnown RBP eCLIP18.67■□□□□ 0.589e-8■■□□□ 13
MSI2-201ENST00000284073 ANKRD62A6NC57 917 aa18.66■□□□□ 0.58
MSI2-201ENST00000284073 SFPQP23246 707 aaKnown RBP eCLIP18.66■□□□□ 0.581e-6■■■□□ 15.2
MSI2-201ENST00000284073 ARHGAP29Q52LW3 1261 aa18.66■□□□□ 0.58
MSI2-201ENST00000284073 VPS37DQ86XT2 251 aa18.66■□□□□ 0.58
MSI2-201ENST00000284073 JMYQ8N9B5 988 aa18.66■□□□□ 0.58
MSI2-201ENST00000284073 PDRG1Q9NUG6 133 aa18.65■□□□□ 0.58
MSI2-201ENST00000284073 RBM27Q9P2N5 1060 aaKnown RBP18.65■□□□□ 0.58
MSI2-201ENST00000284073 CLIP2Q9UDT6 1046 aa18.65■□□□□ 0.58
MSI2-201ENST00000284073 CCDC183Q5T5S1 534 aa18.65■□□□□ 0.58
MSI2-201ENST00000284073 GNAI2P04899 355 aa18.65■□□□□ 0.58
MSI2-201ENST00000284073 ZRSR2Q15696 482 aaKnown RBP18.65■□□□□ 0.58
MSI2-201ENST00000284073 JAKMIP1Q96N16 626 aaKnown RBP18.65■□□□□ 0.58
MSI2-201ENST00000284073 KIF2AO00139 706 aaPredicted RBP18.64■□□□□ 0.57
MSI2-201ENST00000284073 IGSF3O75054 1194 aa18.64■□□□□ 0.57
MSI2-201ENST00000284073 ZNF830Q96NB3 372 aaPredicted RBP18.64■□□□□ 0.57
MSI2-201ENST00000284073 ADCY5O95622 1261 aa18.64■□□□□ 0.57
MSI2-201ENST00000284073 LMAN1P49257 510 aa18.64■□□□□ 0.57
MSI2-201ENST00000284073 PIP4K2AP48426 406 aaPredicted RBP18.64■□□□□ 0.57
MSI2-201ENST00000284073 EPB41L2O43491 1005 aaKnown RBP18.64■□□□□ 0.57
MSI2-201ENST00000284073 CCDC43Q96MW1 224 aaKnown RBP18.64■□□□□ 0.57
MSI2-201ENST00000284073 INCENPQ9NQS7 918 aa18.64■□□□□ 0.57
MSI2-201ENST00000284073 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.64■□□□□ 0.571e-6■■■■■ 140.9
MSI2-201ENST00000284073 DACH1Q9UI36 760 aa18.64■□□□□ 0.57
MSI2-201ENST00000284073 VGFO15240 615 aaPredicted RBP18.63■□□□□ 0.57
MSI2-201ENST00000284073 ZNF428Q96B54 188 aa18.63■□□□□ 0.57
MSI2-201ENST00000284073 GDPD2Q9HCC8 539 aa18.63■□□□□ 0.57
MSI2-201ENST00000284073 RNF187Q5TA31 235 aaPredicted RBP18.63■□□□□ 0.57
MSI2-201ENST00000284073 PRKAR2BP31323 418 aa18.63■□□□□ 0.57
MSI2-201ENST00000284073 ANKRD1Q15327 319 aa18.63■□□□□ 0.57
MSI2-201ENST00000284073 CASQ1P31415 396 aa18.63■□□□□ 0.57
MSI2-201ENST00000284073 CABP2Q9NPB3 220 aa18.63■□□□□ 0.57
MSI2-201ENST00000284073 CFAP45Q9UL16 551 aa18.62■□□□□ 0.57
MSI2-201ENST00000284073 SEPT7Q16181 437 aaKnown RBP18.62■□□□□ 0.57
MSI2-201ENST00000284073 HIP1O00291 1037 aa18.62■□□□□ 0.57
MSI2-201ENST00000284073 GBP3Q9H0R5 595 aa18.62■□□□□ 0.57
MSI2-201ENST00000284073 JAKMIP3Q5VZ66 844 aa18.62■□□□□ 0.57
MSI2-201ENST00000284073 CWC27Q6UX04 472 aaKnown RBP18.62■□□□□ 0.57
MSI2-201ENST00000284073 CKAP2LQ8IYA6 745 aa18.62■□□□□ 0.57
MSI2-201ENST00000284073 MIA2Q96PC5 1412 aa18.62■□□□□ 0.57
MSI2-201ENST00000284073 GTF2A1P52655 376 aaPredicted RBP18.61■□□□□ 0.57
MSI2-201ENST00000284073 NBPF8Q3BBV2 869 aa18.61■□□□□ 0.57
MSI2-201ENST00000284073 DDX11Q96FC9 970 aa18.61■□□□□ 0.57
MSI2-201ENST00000284073 TXLNAP40222 546 aa18.61■□□□□ 0.57
MSI2-201ENST00000284073 SMTNL1A8MU46 457 aa18.61■□□□□ 0.57
MSI2-201ENST00000284073 IQCEQ6IPM2 695 aa18.61■□□□□ 0.57
MSI2-201ENST00000284073 SAMD1Q6SPF0 538 aaPredicted RBP18.61■□□□□ 0.57
MSI2-201ENST00000284073 NBPF1Q3BBV0 1214 aa18.61■□□□□ 0.57
MSI2-201ENST00000284073 PLCD3Q8N3E9 789 aa18.61■□□□□ 0.57
MSI2-201ENST00000284073 BLOC1S2Q6QNY1 142 aa18.6■□□□□ 0.57
MSI2-201ENST00000284073 KIAA1328Q86T90 577 aa18.6■□□□□ 0.57
MSI2-201ENST00000284073 RBM33Q96EV2 1170 aaKnown RBP18.6■□□□□ 0.57
MSI2-201ENST00000284073 TANGO6Q9C0B7 1094 aa18.6■□□□□ 0.57
MSI2-201ENST00000284073 SLC4A2P04920 1241 aa18.6■□□□□ 0.57
MSI2-201ENST00000284073 MCM5P33992 734 aa18.6■□□□□ 0.57
MSI2-201ENST00000284073 MEX3CQ5U5Q3 659 aaKnown RBP18.6■□□□□ 0.57
MSI2-201ENST00000284073 CCDC83Q8IWF9 413 aa18.6■□□□□ 0.57
MSI2-201ENST00000284073 KIF4BQ2VIQ3 1234 aa18.6■□□□□ 0.57
MSI2-201ENST00000284073 ZNF644Q9H582 1327 aaPredicted RBP18.59■□□□□ 0.57
MSI2-201ENST00000284073 CCDC148Q8NFR7 591 aa18.59■□□□□ 0.57
MSI2-201ENST00000284073 PRIMPOLQ96LW4 560 aa18.59■□□□□ 0.57
MSI2-201ENST00000284073 PPP6R1Q9UPN7 881 aa18.59■□□□□ 0.57
MSI2-201ENST00000284073 SART3Q15020 963 aaKnown RBP18.59■□□□□ 0.57
MSI2-201ENST00000284073 ZSCAN12O43309 604 aa18.58■□□□□ 0.57
MSI2-201ENST00000284073 CDK5RAP3Q96JB5 506 aa18.58■□□□□ 0.57
MSI2-201ENST00000284073 CASTP20810 708 aaKnown RBP18.58■□□□□ 0.57
MSI2-201ENST00000284073 MNAT1P51948 309 aa18.58■□□□□ 0.56
MSI2-201ENST00000284073 CCDC30Q5VVM6 783 aa18.58■□□□□ 0.56
MSI2-201ENST00000284073 TMEM57Q8N5G2 664 aa18.58■□□□□ 0.56
MSI2-201ENST00000284073 FGD6Q6ZV73 1430 aa18.57■□□□□ 0.56
MSI2-201ENST00000284073 IL1RAPL2Q9NP60 686 aa18.57■□□□□ 0.56
MSI2-201ENST00000284073 ZSCAN31Q96LW9 406 aaPredicted RBP18.57■□□□□ 0.56
MSI2-201ENST00000284073 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.57■□□□□ 0.563e-6■■■■□ 24.6
MSI2-201ENST00000284073 BMS1Q14692 1282 aaKnown RBP18.57■□□□□ 0.56
MSI2-201ENST00000284073 LUC7LQ9NQ29 371 aaKnown RBP18.57■□□□□ 0.56
MSI2-201ENST00000284073 KRT222Q8N1A0 295 aa18.57■□□□□ 0.56
MSI2-201ENST00000284073 GOLGA6L10A0A0M3HER8 536 aa18.56■□□□□ 0.56
MSI2-201ENST00000284073 BAG4O95429 457 aaKnown RBP18.56■□□□□ 0.56
MSI2-201ENST00000284073 SIL1Q9H173 461 aa18.56■□□□□ 0.56
MSI2-201ENST00000284073 RAI14Q9P0K7 980 aa18.56■□□□□ 0.56
MSI2-201ENST00000284073 SLFN5Q08AF3 891 aa18.56■□□□□ 0.56
MSI2-201ENST00000284073 ZSCAN23Q3MJ62 389 aa18.56■□□□□ 0.56
MSI2-201ENST00000284073 CCAR1Q8IX12 1150 aaKnown RBP18.56■□□□□ 0.56
MSI2-201ENST00000284073 EID1Q9Y6B2 187 aa18.56■□□□□ 0.56
MSI2-201ENST00000284073 WDR97A6NE52 1622 aa18.56■□□□□ 0.56
MSI2-201ENST00000284073 DDX54Q8TDD1 881 aaKnown RBP18.55■□□□□ 0.56
MSI2-201ENST00000284073 KIF5CO60282 957 aa18.55■□□□□ 0.56
MSI2-201ENST00000284073 TMEM132EQ6IEE7 984 aa18.55■□□□□ 0.56
MSI2-201ENST00000284073 SMARCC1Q92922 1105 aaPredicted RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms