RNA–Protein interactions for RNA: ENST00000275575.11

PHTF2-202, Transcript of putative homeodomain transcription factor 2, humanhuman

TSL 1 (best) BASIC

Gene PHTF2, Length 4,541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-202ENST00000275575 PUS7Q96PZ0 661 aaKnown RBP5.35□□□□□ -1.55
PHTF2-202ENST00000275575 INSRP06213 1382 aa5.35□□□□□ -1.55
PHTF2-202ENST00000275575 STAC3Q96MF2 364 aa5.35□□□□□ -1.55
PHTF2-202ENST00000275575 EID1Q9Y6B2 187 aa5.35□□□□□ -1.55
PHTF2-202ENST00000275575 WASLO00401 505 aaPredicted RBP5.34□□□□□ -1.55
PHTF2-202ENST00000275575 LRRC59Q96AG4 307 aaKnown RBP5.34□□□□□ -1.55
PHTF2-202ENST00000275575 RBM6P78332 1123 aaKnown RBP5.34□□□□□ -1.56
PHTF2-202ENST00000275575 PIP4K2BP78356 416 aa5.34□□□□□ -1.56
PHTF2-202ENST00000275575 RBBP6Q7Z6E9 1792 aaKnown RBP5.34□□□□□ -1.56
PHTF2-202ENST00000275575 VGFO15240 615 aaPredicted RBP5.33□□□□□ -1.56
PHTF2-202ENST00000275575 UNC5CLQ8IV45 518 aa5.33□□□□□ -1.56
PHTF2-202ENST00000275575 ATP1B4Q9UN42 357 aaPredicted RBP5.33□□□□□ -1.56
PHTF2-202ENST00000275575 LAMA2P24043 3122 aaKnown RBP5.33□□□□□ -1.56
PHTF2-202ENST00000275575 PARD3Q8TEW0 1356 aa5.33□□□□□ -1.56
PHTF2-202ENST00000275575 AMIGO3Q86WK7 504 aa5.33□□□□□ -1.56
PHTF2-202ENST00000275575 ARAP2Q8WZ64 1704 aa5.33□□□□□ -1.56
PHTF2-202ENST00000275575 PXDNLA1KZ92 1463 aa5.33□□□□□ -1.56
PHTF2-202ENST00000275575 CDH23Q9H251 3354 aa5.33□□□□□ -1.56
PHTF2-202ENST00000275575 EIF3AQ14152 1382 aaKnown RBP5.32□□□□□ -1.56
PHTF2-202ENST00000275575 ECM29Q5VYK3 1845 aa5.32□□□□□ -1.56
PHTF2-202ENST00000275575 A0A1W2PP64 1363 aa5.32□□□□□ -1.56
PHTF2-202ENST00000275575 EDC4Q6P2E9 1401 aaKnown RBP5.32□□□□□ -1.56
PHTF2-202ENST00000275575 XIRP2A4UGR9 3374 aa5.32□□□□□ -1.56
PHTF2-202ENST00000275575 ZNF772Q68DY9 489 aaPredicted RBP5.32□□□□□ -1.56
PHTF2-202ENST00000275575 COL4A5P29400 1685 aa5.31□□□□□ -1.56
PHTF2-202ENST00000275575 NPHP3Q7Z494 1330 aa5.31□□□□□ -1.56
PHTF2-202ENST00000275575 TONSLQ96HA7 1378 aa5.31□□□□□ -1.56
PHTF2-202ENST00000275575 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.31□□□□□ -1.563e-8■■■■□ 20.1
PHTF2-202ENST00000275575 ARHGEF25Q86VW2 580 aa5.3□□□□□ -1.56
PHTF2-202ENST00000275575 PRAM1Q96QH2 718 aa5.3□□□□□ -1.56
PHTF2-202ENST00000275575 DUOX1Q9NRD9 1551 aa5.29□□□□□ -1.56
PHTF2-202ENST00000275575 PDGFDQ9GZP0 370 aaPredicted RBP5.29□□□□□ -1.56
PHTF2-202ENST00000275575 DMDP11532 3685 aa5.29□□□□□ -1.56
PHTF2-202ENST00000275575 RGL3Q3MIN7 710 aa5.29□□□□□ -1.56
PHTF2-202ENST00000275575 PLPPR3Q6T4P5 718 aa5.28□□□□□ -1.56
PHTF2-202ENST00000275575 AKT1S1Q96B36 256 aa5.28□□□□□ -1.56
PHTF2-202ENST00000275575 CARD14Q9BXL6 1004 aa5.28□□□□□ -1.56
PHTF2-202ENST00000275575 ACEP12821 1306 aa5.28□□□□□ -1.56
PHTF2-202ENST00000275575 CCDC125Q86Z20 511 aa5.27□□□□□ -1.57
PHTF2-202ENST00000275575 QTRT2Q9H974 415 aaKnown RBP5.27□□□□□ -1.57
PHTF2-202ENST00000275575 ANO8Q9HCE9 1232 aaPredicted RBP5.27□□□□□ -1.57
PHTF2-202ENST00000275575 NPC1L1Q9UHC9 1359 aa5.27□□□□□ -1.57
PHTF2-202ENST00000275575 COL6A3P12111 3177 aa5.27□□□□□ -1.57
PHTF2-202ENST00000275575 RTL1A6NKG5 1358 aa5.27□□□□□ -1.57
PHTF2-202ENST00000275575 KIF24Q5T7B8 1368 aa5.27□□□□□ -1.57
PHTF2-202ENST00000275575 CCDC7Q96M83 1385 aa5.26□□□□□ -1.57
PHTF2-202ENST00000275575 PHF8Q9UPP1 1060 aa5.26□□□□□ -1.57
PHTF2-202ENST00000275575 DNAH12Q6ZR08 3092 aa5.26□□□□□ -1.57
PHTF2-202ENST00000275575 RXRBP28702 533 aa5.26□□□□□ -1.57
PHTF2-202ENST00000275575 MARCH10Q8NA82 808 aaPredicted RBP5.26□□□□□ -1.57
PHTF2-202ENST00000275575 LRRC4BQ9NT99 713 aa5.26□□□□□ -1.57
PHTF2-202ENST00000275575 PLSCR1O15162 318 aa5.26□□□□□ -1.57
PHTF2-202ENST00000275575 LAMA3Q16787 3333 aa5.26□□□□□ -1.57
PHTF2-202ENST00000275575 FAM50AQ14320 339 aaKnown RBP5.25□□□□□ -1.57
PHTF2-202ENST00000275575 KRT28Q7Z3Y7 464 aa5.25□□□□□ -1.57
PHTF2-202ENST00000275575 SSC5DA1L4H1 1573 aa5.25□□□□□ -1.57
PHTF2-202ENST00000275575 UNC80Q8N2C7 3258 aa5.25□□□□□ -1.57
PHTF2-202ENST00000275575 TRPC5Q9UL62 973 aaPredicted RBP5.25□□□□□ -1.57
PHTF2-202ENST00000275575 SLX4Q8IY92 1834 aa5.25□□□□□ -1.57
PHTF2-202ENST00000275575 ANKRD36BQ8N2N9 1353 aa5.25□□□□□ -1.57
PHTF2-202ENST00000275575 USP34Q70CQ2 3546 aa5.25□□□□□ -1.57
PHTF2-202ENST00000275575 CABLES1Q8TDN4 633 aa5.25□□□□□ -1.57
PHTF2-202ENST00000275575 SLC4A1APQ9BWU0 796 aaKnown RBP5.25□□□□□ -1.57
PHTF2-202ENST00000275575 MYH3P11055 1940 aa5.25□□□□□ -1.57
PHTF2-202ENST00000275575 SCN4AP35499 1836 aa5.24□□□□□ -1.57
PHTF2-202ENST00000275575 ERBB3P21860 1342 aa5.24□□□□□ -1.57
PHTF2-202ENST00000275575 C11orf95C9JLR9 678 aaPredicted RBP5.24□□□□□ -1.57
PHTF2-202ENST00000275575 FOXO3O43524 673 aa5.24□□□□□ -1.57
PHTF2-202ENST00000275575 C10orf71Q711Q0 1435 aa5.24□□□□□ -1.57
PHTF2-202ENST00000275575 PER1O15534 1290 aaPredicted RBP5.24□□□□□ -1.57
PHTF2-202ENST00000275575 L3MBTL2Q969R5 705 aa5.24□□□□□ -1.57
PHTF2-202ENST00000275575 NUDT16Q96DE0 195 aaKnown RBP5.24□□□□□ -1.57
PHTF2-202ENST00000275575 USP21Q9UK80 565 aa5.24□□□□□ -1.57
PHTF2-202ENST00000275575 THRAP3Q9Y2W1 955 aaKnown RBP5.24□□□□□ -1.57
PHTF2-202ENST00000275575 TRPM7Q96QT4 1865 aa5.24□□□□□ -1.57
PHTF2-202ENST00000275575 HEG1Q9ULI3 1381 aa5.24□□□□□ -1.57
PHTF2-202ENST00000275575 NINLQ9Y2I6 1382 aa5.24□□□□□ -1.57
PHTF2-202ENST00000275575 WDR17Q8IZU2 1322 aa5.24□□□□□ -1.57
PHTF2-202ENST00000275575 NKX1-1Q15270 411 aaPredicted RBP5.24□□□□□ -1.57
PHTF2-202ENST00000275575 ESF1Q9H501 851 aaKnown RBP5.24□□□□□ -1.57
PHTF2-202ENST00000275575 CDK5RAP2Q96SN8 1893 aa5.23□□□□□ -1.57
PHTF2-202ENST00000275575 ZRANB1Q9UGI0 708 aa5.23□□□□□ -1.57
PHTF2-202ENST00000275575 CDK19Q9BWU1 502 aa5.23□□□□□ -1.57
PHTF2-202ENST00000275575 TTC21BQ7Z4L5 1316 aa5.22□□□□□ -1.57
PHTF2-202ENST00000275575 WDFY3Q8IZQ1 3526 aa5.22□□□□□ -1.57
PHTF2-202ENST00000275575 SLC4A9Q96Q91 983 aa5.22□□□□□ -1.57
PHTF2-202ENST00000275575 FOCADQ5VW36 1801 aa5.22□□□□□ -1.57
PHTF2-202ENST00000275575 CACNA1FO60840 1977 aa5.22□□□□□ -1.57
PHTF2-202ENST00000275575 LARP1Q6PKG0 1096 aaKnown RBP5.22□□□□□ -1.57
PHTF2-202ENST00000275575 SEPT12Q8IYM1 358 aa5.22□□□□□ -1.57
PHTF2-202ENST00000275575 OTOFQ9HC10 1997 aa5.22□□□□□ -1.57
PHTF2-202ENST00000275575 SCAF1Q9H7N4 1312 aaKnown RBP5.22□□□□□ -1.57
PHTF2-202ENST00000275575 PHIPQ8WWQ0 1821 aa5.22□□□□□ -1.57
PHTF2-202ENST00000275575 SPEF2Q9C093 1822 aa5.22□□□□□ -1.57
PHTF2-202ENST00000275575 HDGFP51858 240 aaKnown RBP5.22□□□□□ -1.57
PHTF2-202ENST00000275575 SCN9AQ15858 1988 aa5.22□□□□□ -1.57
PHTF2-202ENST00000275575 PPP1R15AO75807 674 aaPredicted RBP5.21□□□□□ -1.58
PHTF2-202ENST00000275575 DEFB132Q7Z7B7 95 aa5.21□□□□□ -1.58
PHTF2-202ENST00000275575 ATF3P18847 181 aa5.2□□□□□ -1.58
PHTF2-202ENST00000275575 PPARGC1BQ86YN6 1023 aaKnown RBP5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms