RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 CCDC173Q0VFZ6 552 aa14.14□□□□□ -0.15
SHPRH-201ENST00000275233 FAM43AQ8N2R8 423 aa14.14□□□□□ -0.15
SHPRH-201ENST00000275233 SYNJ2O15056 1496 aa14.13□□□□□ -0.15
SHPRH-201ENST00000275233 SRCIN1Q9C0H9 1055 aa14.13□□□□□ -0.15
SHPRH-201ENST00000275233 TANGO6Q9C0B7 1094 aa14.13□□□□□ -0.15
SHPRH-201ENST00000275233 IL1RAPL2Q9NP60 686 aa14.13□□□□□ -0.15
SHPRH-201ENST00000275233 RAI14Q9P0K7 980 aa14.13□□□□□ -0.15
SHPRH-201ENST00000275233 ZNF396Q96N95 335 aaPredicted RBP14.13□□□□□ -0.15
SHPRH-201ENST00000275233 FILIP1LQ4L180 1135 aa14.12□□□□□ -0.15
SHPRH-201ENST00000275233 CYP46A1Q9Y6A2 500 aa14.12□□□□□ -0.15
SHPRH-201ENST00000275233 CWC27Q6UX04 472 aaKnown RBP14.12□□□□□ -0.15
SHPRH-201ENST00000275233 ANKLE2Q86XL3 938 aa14.12□□□□□ -0.15
SHPRH-201ENST00000275233 TDO2P48775 406 aa14.12□□□□□ -0.15
SHPRH-201ENST00000275233 NACAP1Q9BZK3 213 aa14.12□□□□□ -0.15
SHPRH-201ENST00000275233 TSPY26PQ9H489 355 aa14.12□□□□□ -0.15
SHPRH-201ENST00000275233 MPHOSPH10O00566 681 aaKnown RBP14.12□□□□□ -0.15
SHPRH-201ENST00000275233 TRAK2O60296 914 aa14.12□□□□□ -0.15
SHPRH-201ENST00000275233 STAC3Q96MF2 364 aa14.12□□□□□ -0.15
SHPRH-201ENST00000275233 ARGLU1Q9NWB6 273 aaPredicted RBP14.12□□□□□ -0.15
SHPRH-201ENST00000275233 SSBP05455 408 aaKnown RBP eCLIP14.11□□□□□ -0.15
SHPRH-201ENST00000275233 CCT4P50991 539 aaKnown RBP14.11□□□□□ -0.15
SHPRH-201ENST00000275233 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.11□□□□□ -0.15
SHPRH-201ENST00000275233 PDCL3Q9H2J4 239 aa14.11□□□□□ -0.15
SHPRH-201ENST00000275233 USP5P45974 858 aa14.11□□□□□ -0.15
SHPRH-201ENST00000275233 SRGAP3O43295 1099 aa14.11□□□□□ -0.15
SHPRH-201ENST00000275233 MATR3P43243 847 aaKnown RBP eCLIP14.11□□□□□ -0.155e-6■■■□□ 17.1
SHPRH-201ENST00000275233 ME1P48163 572 aa14.11□□□□□ -0.15
SHPRH-201ENST00000275233 CCDC39Q9UFE4 941 aa14.11□□□□□ -0.15
SHPRH-201ENST00000275233 PTCD1O75127 700 aaKnown RBP14.1□□□□□ -0.15
SHPRH-201ENST00000275233 CDR1P51861 262 aa14.1□□□□□ -0.15
SHPRH-201ENST00000275233 CHMP4BP1P59074 171 aa14.1□□□□□ -0.15
SHPRH-201ENST00000275233 SOGA3Q5TF21 947 aa14.1□□□□□ -0.15
SHPRH-201ENST00000275233 SERPINC1P01008 464 aa14.1□□□□□ -0.15
SHPRH-201ENST00000275233 USHBP1Q8N6Y0 703 aa14.1□□□□□ -0.15
SHPRH-201ENST00000275233 GCC1Q96CN9 775 aa14.1□□□□□ -0.15
SHPRH-201ENST00000275233 ERBINQ96RT1 1412 aa14.1□□□□□ -0.15
SHPRH-201ENST00000275233 ZNF692Q9BU19 519 aaPredicted RBP14.1□□□□□ -0.15
SHPRH-201ENST00000275233 FANCIQ9NVI1 1328 aa14.1□□□□□ -0.15
SHPRH-201ENST00000275233 HSP90B2PQ58FF3 399 aa14.1□□□□□ -0.15
SHPRH-201ENST00000275233 SMARCE1Q969G3 411 aa14.1□□□□□ -0.15
SHPRH-201ENST00000275233 LRP2BPQ9P2M1 347 aa14.1□□□□□ -0.15
SHPRH-201ENST00000275233 TRIM22Q8IYM9 498 aa14.1□□□□□ -0.15
SHPRH-201ENST00000275233 C9orf84Q5VXU9 1444 aa14.09□□□□□ -0.15
SHPRH-201ENST00000275233 AKNAQ7Z591 1439 aa14.09□□□□□ -0.15
SHPRH-201ENST00000275233 IDH1O75874 414 aaKnown RBP14.09□□□□□ -0.15
SHPRH-201ENST00000275233 NUTM1Q86Y26 1132 aa14.09□□□□□ -0.15
SHPRH-201ENST00000275233 CASKIN1Q8WXD9 1431 aa14.09□□□□□ -0.15
SHPRH-201ENST00000275233 SEPT11Q9NVA2 429 aaKnown RBP14.09□□□□□ -0.15
SHPRH-201ENST00000275233 FAM177A1Q8N128 213 aaPredicted RBP14.09□□□□□ -0.15
SHPRH-201ENST00000275233 ACBD3Q9H3P7 528 aa14.09□□□□□ -0.15
SHPRH-201ENST00000275233 ABCF2Q9UG63 623 aa14.09□□□□□ -0.15
SHPRH-201ENST00000275233 ADAMTS2O95450 1211 aa14.08□□□□□ -0.16
SHPRH-201ENST00000275233 GRIN2BQ13224 1484 aa14.08□□□□□ -0.16
SHPRH-201ENST00000275233 PNISRQ8TF01 805 aaKnown RBP14.08□□□□□ -0.16
SHPRH-201ENST00000275233 ZNF219Q9P2Y4 722 aaPredicted RBP14.08□□□□□ -0.16
SHPRH-201ENST00000275233 THUMPD2Q9BTF0 503 aaKnown RBP14.08□□□□□ -0.16
SHPRH-201ENST00000275233 PDCP20941 246 aa14.07□□□□□ -0.16
SHPRH-201ENST00000275233 NBPF8Q3BBV2 869 aa14.07□□□□□ -0.16
SHPRH-201ENST00000275233 ZNF76P36508 570 aa14.07□□□□□ -0.16
SHPRH-201ENST00000275233 DCTN1Q14203 1278 aa14.07□□□□□ -0.16
SHPRH-201ENST00000275233 RABEP1Q15276 862 aa14.07□□□□□ -0.16
SHPRH-201ENST00000275233 WAPLQ7Z5K2 1190 aa14.07□□□□□ -0.16
SHPRH-201ENST00000275233 JAKMIP1Q96N16 626 aaKnown RBP14.07□□□□□ -0.16
SHPRH-201ENST00000275233 LETM1O95202 739 aaPredicted RBP14.07□□□□□ -0.16
SHPRH-201ENST00000275233 MCM10Q7L590 875 aa14.07□□□□□ -0.16
SHPRH-201ENST00000275233 DEF6Q9H4E7 631 aa14.07□□□□□ -0.16
SHPRH-201ENST00000275233 AAMPQ13685 434 aa14.07□□□□□ -0.16
SHPRH-201ENST00000275233 UBAC1Q9BSL1 405 aa14.06□□□□□ -0.16
SHPRH-201ENST00000275233 TNMDQ9H2S6 317 aa14.06□□□□□ -0.16
SHPRH-201ENST00000275233 NESP48681 1621 aa14.06□□□□□ -0.16
SHPRH-201ENST00000275233 LARP1BQ659C4 914 aaKnown RBP14.06□□□□□ -0.16
SHPRH-201ENST00000275233 IGHMBP2P38935 993 aaKnown RBP14.06□□□□□ -0.16
SHPRH-201ENST00000275233 NEFHP12036 1026 aa14.06□□□□□ -0.16
SHPRH-201ENST00000275233 CEP126Q9P2H0 1117 aa14.06□□□□□ -0.16
SHPRH-201ENST00000275233 RDXP35241 583 aaKnown RBP14.05□□□□□ -0.16
SHPRH-201ENST00000275233 ZSCAN25Q6NSZ9 544 aa14.05□□□□□ -0.16
SHPRH-201ENST00000275233 CHD1LQ86WJ1 897 aa14.05□□□□□ -0.16
SHPRH-201ENST00000275233 PDRG1Q9NUG6 133 aa14.05□□□□□ -0.16
SHPRH-201ENST00000275233 ATF7IPQ6VMQ6 1270 aa14.05□□□□□ -0.16
SHPRH-201ENST00000275233 DDX11Q96FC9 970 aa14.05□□□□□ -0.16
SHPRH-201ENST00000275233 METTL24Q5JXM2 366 aa14.05□□□□□ -0.16
SHPRH-201ENST00000275233 DHX37Q8IY37 1157 aaKnown RBP14.05□□□□□ -0.16
SHPRH-201ENST00000275233 GNAT3A8MTJ3 354 aa14.04□□□□□ -0.16
SHPRH-201ENST00000275233 MRE11P49959 708 aa14.04□□□□□ -0.16
SHPRH-201ENST00000275233 ANKRD62A6NC57 917 aa14.04□□□□□ -0.16
SHPRH-201ENST00000275233 SMARCA5O60264 1052 aaPredicted RBP14.04□□□□□ -0.16
SHPRH-201ENST00000275233 MCM2P49736 904 aa14.04□□□□□ -0.16
SHPRH-201ENST00000275233 NUDT16Q96DE0 195 aaKnown RBP14.04□□□□□ -0.16
SHPRH-201ENST00000275233 ZNHIT6Q9NWK9 470 aaKnown RBP14.04□□□□□ -0.16
SHPRH-201ENST00000275233 BLOC1S2Q6QNY1 142 aa14.04□□□□□ -0.16
SHPRH-201ENST00000275233 MYO6Q9UM54 1294 aa14.04□□□□□ -0.16
SHPRH-201ENST00000275233 ANKRD1Q15327 319 aa14.03□□□□□ -0.16
SHPRH-201ENST00000275233 MVPQ14764 893 aaKnown RBP14.03□□□□□ -0.16
SHPRH-201ENST00000275233 MPRIPQ6WCQ1 1025 aa14.03□□□□□ -0.16
SHPRH-201ENST00000275233 PPFIBP1Q86W92 1011 aa14.03□□□□□ -0.16
SHPRH-201ENST00000275233 MAP7D2Q96T17 732 aa14.03□□□□□ -0.16
SHPRH-201ENST00000275233 MYD88Q99836 296 aa14.03□□□□□ -0.16
SHPRH-201ENST00000275233 EXOC6BQ9Y2D4 811 aa14.03□□□□□ -0.16
SHPRH-201ENST00000275233 MINDY4BA8MYZ0 360 aa14.03□□□□□ -0.16
SHPRH-201ENST00000275233 STIM1Q13586 685 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms