RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 LMO7Q8WWI1 1683 aa23.18■■□□□ 1.3
SKP2-201ENST00000274254 FAM83GA6ND36 823 aa23.18■■□□□ 1.3
SKP2-201ENST00000274254 ADAMTS2O95450 1211 aa23.18■■□□□ 1.3
SKP2-201ENST00000274254 CHRNA2Q15822 529 aa23.18■■□□□ 1.3
SKP2-201ENST00000274254 COL3A1P02461 1466 aaPredicted RBP23.17■■□□□ 1.3
SKP2-201ENST00000274254 ZBTB7CA1YPR0 619 aa23.17■■□□□ 1.3
SKP2-201ENST00000274254 BLMP54132 1417 aaPredicted RBP23.17■■□□□ 1.3
SKP2-201ENST00000274254 HSP90AB2PQ58FF8 381 aa23.17■■□□□ 1.3
SKP2-201ENST00000274254 AXIN2Q9Y2T1 843 aa23.17■■□□□ 1.3
SKP2-201ENST00000274254 COL14A1Q05707 1796 aaKnown RBP23.16■■□□□ 1.3
SKP2-201ENST00000274254 CCER2I3L3R5 266 aa23.16■■□□□ 1.3
SKP2-201ENST00000274254 CCDC184Q52MB2 194 aa23.16■■□□□ 1.3
SKP2-201ENST00000274254 CFAP53Q96M91 514 aa23.14■■□□□ 1.3
SKP2-201ENST00000274254 CAMTA1Q9Y6Y1 1673 aa23.14■■□□□ 1.29
SKP2-201ENST00000274254 RGPD5Q99666 1765 aa23.14■■□□□ 1.29
SKP2-201ENST00000274254 MRS2Q9HD23 443 aa23.11■■□□□ 1.29
SKP2-201ENST00000274254 PLCH1Q4KWH8 1693 aa23.1■■□□□ 1.29
SKP2-201ENST00000274254 IL13P35225 146 aa23.1■■□□□ 1.29
SKP2-201ENST00000274254 EIF4A2Q14240 407 aaKnown RBP23.1■■□□□ 1.29
SKP2-201ENST00000274254 ERBB3P21860 1342 aa23.1■■□□□ 1.29
SKP2-201ENST00000274254 COL5A2P05997 1499 aaPredicted RBP23.1■■□□□ 1.29
SKP2-201ENST00000274254 SLIT2O94813 1529 aa23.1■■□□□ 1.29
SKP2-201ENST00000274254 DIAPH1O60610 1272 aaKnown RBP23.09■■□□□ 1.29
SKP2-201ENST00000274254 ILDR1Q86SU0 546 aaPredicted RBP23.09■■□□□ 1.29
SKP2-201ENST00000274254 BTG4Q9NY30 223 aa23.08■■□□□ 1.29
SKP2-201ENST00000274254 NWD2Q9ULI1 1742 aa23.08■■□□□ 1.29
SKP2-201ENST00000274254 ANKRD24Q8TF21 1146 aa23.08■■□□□ 1.28
SKP2-201ENST00000274254 C8orf37Q96NL8 207 aa23.08■■□□□ 1.28
SKP2-201ENST00000274254 FNBP4Q8N3X1 1017 aaPredicted RBP23.07■■□□□ 1.28
SKP2-201ENST00000274254 MEX3CQ5U5Q3 659 aaKnown RBP23.06■■□□□ 1.28
SKP2-201ENST00000274254 LTV1Q96GA3 475 aaPredicted RBP23.06■■□□□ 1.28
SKP2-201ENST00000274254 NGLY1Q96IV0 654 aa23.06■■□□□ 1.28
SKP2-201ENST00000274254 NRAPQ86VF7 1730 aa23.06■■□□□ 1.28
SKP2-201ENST00000274254 RGPD1P0DJD0 1748 aa23.04■■□□□ 1.28
SKP2-201ENST00000274254 PNISRQ8TF01 805 aaKnown RBP23.04■■□□□ 1.28
SKP2-201ENST00000274254 NUDCQ9Y266 331 aa23.03■■□□□ 1.28
SKP2-201ENST00000274254 WDR17Q8IZU2 1322 aa23.03■■□□□ 1.28
SKP2-201ENST00000274254 BCL9LQ86UU0 1499 aa23.03■■□□□ 1.28
SKP2-201ENST00000274254 FAM208AQ9UK61 1670 aaKnown RBP23.03■■□□□ 1.28
SKP2-201ENST00000274254 EVA1CP58658 441 aa23.02■■□□□ 1.28
SKP2-201ENST00000274254 EYA1Q99502 592 aa23.02■■□□□ 1.28
SKP2-201ENST00000274254 IGSF1Q8N6C5 1336 aa23.01■■□□□ 1.27
SKP2-201ENST00000274254 STRN4Q9NRL3 753 aa23.01■■□□□ 1.27
SKP2-201ENST00000274254 RGPD2P0DJD1 1756 aa23.01■■□□□ 1.27
SKP2-201ENST00000274254 NCAPD2Q15021 1401 aa23■■□□□ 1.27
SKP2-201ENST00000274254 TNKS1BP1Q9C0C2 1729 aaKnown RBP23■■□□□ 1.27
SKP2-201ENST00000274254 CSB-PGBD3P0DP91 1061 aa23■■□□□ 1.27
SKP2-201ENST00000274254 NBPF6Q5VWK0 638 aa23■■□□□ 1.27
SKP2-201ENST00000274254 LARP1Q6PKG0 1096 aaKnown RBP23■■□□□ 1.27
SKP2-201ENST00000274254 UNC5CLQ8IV45 518 aa23■■□□□ 1.27
SKP2-201ENST00000274254 NBPF4Q96M43 638 aa23■■□□□ 1.27
SKP2-201ENST00000274254 AFF2P51816 1311 aa22.99■■□□□ 1.27
SKP2-201ENST00000274254 U2SURPO15042 1029 aaKnown RBP22.99■■□□□ 1.27
SKP2-201ENST00000274254 USP21Q9UK80 565 aa22.98■■□□□ 1.27
SKP2-201ENST00000274254 CRB1P82279 1406 aa22.98■■□□□ 1.27
SKP2-201ENST00000274254 U2AF1L5P0DN76 240 aaPredicted RBP22.98■■□□□ 1.27
SKP2-201ENST00000274254 U2AF1Q01081 240 aaKnown RBP eCLIP22.98■■□□□ 1.27
SKP2-201ENST00000274254 WDR43Q15061 677 aaKnown RBP eCLIP22.98■■□□□ 1.27
SKP2-201ENST00000274254 KDRP35968 1356 aa22.97■■□□□ 1.27
SKP2-201ENST00000274254 TOM1L2Q6ZVM7 507 aa22.97■■□□□ 1.27
SKP2-201ENST00000274254 CARD10Q9BWT7 1032 aa22.97■■□□□ 1.27
SKP2-201ENST00000274254 NLRP2Q9NX02 1062 aa22.97■■□□□ 1.27
SKP2-201ENST00000274254 ADAMTS8Q9UP79 889 aa22.96■■□□□ 1.27
SKP2-201ENST00000274254 SULT6B1Q6IMI4 303 aa22.94■■□□□ 1.26
SKP2-201ENST00000274254 AEBP1Q8IUX7 1158 aa22.94■■□□□ 1.26
SKP2-201ENST00000274254 VPS72Q15906 364 aa22.93■■□□□ 1.26
SKP2-201ENST00000274254 USHBP1Q8N6Y0 703 aa22.93■■□□□ 1.26
SKP2-201ENST00000274254 FCHSD2O94868 740 aa22.92■■□□□ 1.26
SKP2-201ENST00000274254 HMOX1P09601 288 aa22.92■■□□□ 1.26
SKP2-201ENST00000274254 FAM9BQ8IZU0 186 aa22.92■■□□□ 1.26
SKP2-201ENST00000274254 RSPH6AQ9H0K4 717 aa22.92■■□□□ 1.26
SKP2-201ENST00000274254 SPATA31A5Q5VU36 1347 aa22.92■■□□□ 1.26
SKP2-201ENST00000274254 SPATA31A7Q8IWB4 1347 aa22.92■■□□□ 1.26
SKP2-201ENST00000274254 SPATA31A1Q5TZJ5 1347 aa22.91■■□□□ 1.26
SKP2-201ENST00000274254 ATRNO75882 1429 aa22.91■■□□□ 1.26
SKP2-201ENST00000274254 PLEKHF1Q96S99 279 aa22.88■■□□□ 1.25
SKP2-201ENST00000274254 TRPC5Q9UL62 973 aaPredicted RBP22.88■■□□□ 1.25
SKP2-201ENST00000274254 PRKAR2BP31323 418 aa22.87■■□□□ 1.25
SKP2-201ENST00000274254 ZNF772Q68DY9 489 aaPredicted RBP22.87■■□□□ 1.25
SKP2-201ENST00000274254 TCP11L2Q8N4U5 519 aa22.87■■□□□ 1.25
SKP2-201ENST00000274254 USP35Q9P2H5 1018 aa22.87■■□□□ 1.25
SKP2-201ENST00000274254 THRAP3Q9Y2W1 955 aaKnown RBP22.87■■□□□ 1.25
SKP2-201ENST00000274254 PNNQ9H307 717 aaKnown RBP22.86■■□□□ 1.25
SKP2-201ENST00000274254 CCDC9Q9Y3X0 531 aaKnown RBP22.86■■□□□ 1.25
SKP2-201ENST00000274254 MEGF6O75095 1541 aa22.86■■□□□ 1.25
SKP2-201ENST00000274254 PLEKHG2Q9H7P9 1386 aa22.85■■□□□ 1.25
SKP2-201ENST00000274254 DISP2A7MBM2 1401 aa22.85■■□□□ 1.25
SKP2-201ENST00000274254 BARGINQ6ZT62 677 aa22.85■■□□□ 1.25
SKP2-201ENST00000274254 GJD4Q96KN9 370 aaPredicted RBP22.85■■□□□ 1.25
SKP2-201ENST00000274254 QTRT2Q9H974 415 aaKnown RBP22.85■■□□□ 1.25
SKP2-201ENST00000274254 GLI3P10071 1580 aa22.84■■□□□ 1.25
SKP2-201ENST00000274254 RAPGEF4Q8WZA2 1011 aa22.84■■□□□ 1.25
SKP2-201ENST00000274254 RGS17Q9UGC6 210 aaPredicted RBP22.84■■□□□ 1.25
SKP2-201ENST00000274254 WNK3Q9BYP7 1800 aa22.84■■□□□ 1.25
SKP2-201ENST00000274254 IL2RBP14784 551 aa22.83■■□□□ 1.25
SKP2-201ENST00000274254 CCDC146Q8IYE0 955 aa22.83■■□□□ 1.25
SKP2-201ENST00000274254 RUNDC1Q96C34 613 aa22.82■■□□□ 1.24
SKP2-201ENST00000274254 OVOS2A0A0G2JMS6 1433 aa22.82■■□□□ 1.24
SKP2-201ENST00000274254 PHACTR3Q96KR7 559 aa22.82■■□□□ 1.24
SKP2-201ENST00000274254 PARP4Q9UKK3 1724 aaKnown RBP22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms