RNA–Protein interactions for RNA: ENST00000272163.8

LBR-201, Transcript of lamin B receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LBR, Length 3,745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LBR-201ENST00000272163 TFCP2L1Q9NZI6 479 aa11.03□□□□□ -0.64
LBR-201ENST00000272163 PPLO60437 1756 aa11.03□□□□□ -0.64
LBR-201ENST00000272163 ZNF330Q9Y3S2 320 aaPredicted RBP11.02□□□□□ -0.64
LBR-201ENST00000272163 XRN1Q8IZH2 1706 aaKnown RBP11.02□□□□□ -0.64
LBR-201ENST00000272163 BARGINQ6ZT62 677 aa11.02□□□□□ -0.65
LBR-201ENST00000272163 ATP7BP35670 1465 aa11.02□□□□□ -0.65
LBR-201ENST00000272163 POLR3AO14802 1390 aaPredicted RBP11.02□□□□□ -0.65
LBR-201ENST00000272163 RALGAPBQ86X10 1494 aa11.02□□□□□ -0.65
LBR-201ENST00000272163 RBM42Q9BTD8 480 aaKnown RBP11.01□□□□□ -0.65
LBR-201ENST00000272163 SPON1Q9HCB6 807 aa11.01□□□□□ -0.65
LBR-201ENST00000272163 EZH2Q15910 746 aaKnown RBP11.01□□□□□ -0.65
LBR-201ENST00000272163 BLMP54132 1417 aaPredicted RBP11.01□□□□□ -0.65
LBR-201ENST00000272163 RTF1Q92541 710 aaKnown RBP11□□□□□ -0.65
LBR-201ENST00000272163 AATKQ6ZMQ8 1374 aa11□□□□□ -0.65
LBR-201ENST00000272163 HSP90AB1P08238 724 aaKnown RBP11□□□□□ -0.65
LBR-201ENST00000272163 FBLN1P23142 703 aa11□□□□□ -0.65
LBR-201ENST00000272163 MAP3K19Q56UN5 1328 aa11□□□□□ -0.65
LBR-201ENST00000272163 TMOD3Q9NYL9 352 aa10.99□□□□□ -0.65
LBR-201ENST00000272163 COL16A1Q07092 1604 aaPredicted RBP10.99□□□□□ -0.65
LBR-201ENST00000272163 EDC4Q6P2E9 1401 aaKnown RBP10.99□□□□□ -0.65
LBR-201ENST00000272163 SSH2Q76I76 1423 aa10.99□□□□□ -0.65
LBR-201ENST00000272163 FYB1O15117 783 aa10.99□□□□□ -0.65
LBR-201ENST00000272163 ZNF530Q6P9A1 599 aaPredicted RBP10.99□□□□□ -0.65
LBR-201ENST00000272163 SMARCC1Q92922 1105 aaPredicted RBP10.99□□□□□ -0.65
LBR-201ENST00000272163 AK7Q96M32 723 aa10.99□□□□□ -0.65
LBR-201ENST00000272163 RGS12O14924 1447 aa10.99□□□□□ -0.65
LBR-201ENST00000272163 A0A1W2PP64 1363 aa10.98□□□□□ -0.65
LBR-201ENST00000272163 NRXN3Q9Y4C0 1643 aa10.98□□□□□ -0.65
LBR-201ENST00000272163 EMILIN1Q9Y6C2 1016 aa10.98□□□□□ -0.65
LBR-201ENST00000272163 PXDNQ92626 1479 aa10.98□□□□□ -0.65
LBR-201ENST00000272163 ATRNO75882 1429 aa10.98□□□□□ -0.65
LBR-201ENST00000272163 CRB1P82279 1406 aa10.98□□□□□ -0.65
LBR-201ENST00000272163 HOXC9P31274 260 aa10.98□□□□□ -0.65
LBR-201ENST00000272163 TEFQ10587 303 aa10.98□□□□□ -0.65
LBR-201ENST00000272163 HSP90AB2PQ58FF8 381 aa10.98□□□□□ -0.65
LBR-201ENST00000272163 NSD3Q9BZ95 1437 aa10.98□□□□□ -0.65
LBR-201ENST00000272163 ANKRD36BQ8N2N9 1353 aa10.98□□□□□ -0.65
LBR-201ENST00000272163 CABP4P57796 275 aa10.98□□□□□ -0.65
LBR-201ENST00000272163 PRIM1P49642 420 aaKnown RBP10.97□□□□□ -0.65
LBR-201ENST00000272163 TTC5Q8N0Z6 440 aa10.97□□□□□ -0.65
LBR-201ENST00000272163 CCNL1Q9UK58 526 aaPredicted RBP10.97□□□□□ -0.65
LBR-201ENST00000272163 ATF5Q9Y2D1 282 aaPredicted RBP10.97□□□□□ -0.65
LBR-201ENST00000272163 SBNO2Q9Y2G9 1366 aa10.97□□□□□ -0.65
LBR-201ENST00000272163 KIF1AQ12756 1690 aa10.97□□□□□ -0.65
LBR-201ENST00000272163 ERBB3P21860 1342 aa10.96□□□□□ -0.65
LBR-201ENST00000272163 MAPK8IP3Q9UPT6 1336 aa10.96□□□□□ -0.65
LBR-201ENST00000272163 AXIN2Q9Y2T1 843 aa10.96□□□□□ -0.65
LBR-201ENST00000272163 U2AF1L5P0DN76 240 aaPredicted RBP10.96□□□□□ -0.65
LBR-201ENST00000272163 U2AF1Q01081 240 aaKnown RBP eCLIP10.96□□□□□ -0.65
LBR-201ENST00000272163 BCL9LQ86UU0 1499 aa10.96□□□□□ -0.66
LBR-201ENST00000272163 USP19O94966 1318 aa10.96□□□□□ -0.66
LBR-201ENST00000272163 DIAPH1O60610 1272 aaKnown RBP10.96□□□□□ -0.66
LBR-201ENST00000272163 IFNL2Q8IZJ0 200 aa10.96□□□□□ -0.66
LBR-201ENST00000272163 TESK2Q96S53 571 aa10.96□□□□□ -0.66
LBR-201ENST00000272163 NALCNQ8IZF0 1738 aa10.95□□□□□ -0.66
LBR-201ENST00000272163 MTHFSP49914 203 aa10.95□□□□□ -0.66
LBR-201ENST00000272163 GPR162Q16538 588 aa10.95□□□□□ -0.66
LBR-201ENST00000272163 OVOS2A0A0G2JMS6 1433 aa10.95□□□□□ -0.66
LBR-201ENST00000272163 OVOS2A0A0J9YW53 1432 aa10.95□□□□□ -0.66
LBR-201ENST00000272163 OVOS2Q6IE36 1432 aa10.95□□□□□ -0.66
LBR-201ENST00000272163 WDR43Q15061 677 aaKnown RBP eCLIP10.95□□□□□ -0.66
LBR-201ENST00000272163 TXNRD1Q16881 649 aa10.95□□□□□ -0.66
LBR-201ENST00000272163 CDK12Q9NYV4 1490 aaPredicted RBP10.95□□□□□ -0.66
LBR-201ENST00000272163 CPDO75976 1380 aa10.95□□□□□ -0.66
LBR-201ENST00000272163 ZBTB7AO95365 584 aa10.95□□□□□ -0.66
LBR-201ENST00000272163 PNNQ9H307 717 aaKnown RBP10.95□□□□□ -0.66
LBR-201ENST00000272163 FLT4P35916 1363 aa10.94□□□□□ -0.66
LBR-201ENST00000272163 SULT6B1Q6IMI4 303 aa10.94□□□□□ -0.66
LBR-201ENST00000272163 ADGRB1O14514 1584 aa10.94□□□□□ -0.66
LBR-201ENST00000272163 AMOTQ4VCS5 1084 aa10.93□□□□□ -0.66
LBR-201ENST00000272163 PCDH11XQ9BZA7 1347 aa10.93□□□□□ -0.66
LBR-201ENST00000272163 PCDH11YQ9BZA8 1340 aa10.93□□□□□ -0.66
LBR-201ENST00000272163 PHF14O94880 888 aa10.93□□□□□ -0.66
LBR-201ENST00000272163 HMOX1P09601 288 aa10.93□□□□□ -0.66
LBR-201ENST00000272163 DDX10Q13206 875 aaKnown RBP10.93□□□□□ -0.66
LBR-201ENST00000272163 SLIT2O94813 1529 aa10.92□□□□□ -0.66
LBR-201ENST00000272163 ONECUT3O60422 494 aaPredicted RBP10.92□□□□□ -0.66
LBR-201ENST00000272163 MARCH10Q8NA82 808 aaPredicted RBP10.92□□□□□ -0.66
LBR-201ENST00000272163 PTCD1O75127 700 aaKnown RBP10.92□□□□□ -0.66
LBR-201ENST00000272163 CPSF1Q10570 1443 aaKnown RBP10.91□□□□□ -0.66
LBR-201ENST00000272163 GTF2E1P29083 439 aaPredicted RBP10.91□□□□□ -0.66
LBR-201ENST00000272163 NBPF6Q5VWK0 638 aa10.91□□□□□ -0.66
LBR-201ENST00000272163 NBPF4Q96M43 638 aa10.91□□□□□ -0.66
LBR-201ENST00000272163 FLAD1Q8NFF5 587 aa10.9□□□□□ -0.66
LBR-201ENST00000272163 KCNQ2O43526 872 aa10.89□□□□□ -0.67
LBR-201ENST00000272163 ATP6V1AP38606 617 aa10.89□□□□□ -0.67
LBR-201ENST00000272163 FMN2Q9NZ56 1722 aa10.88□□□□□ -0.67
LBR-201ENST00000272163 SHPRHQ149N8 1683 aa10.88□□□□□ -0.67
LBR-201ENST00000272163 XIRP1Q702N8 1843 aaKnown RBP10.88□□□□□ -0.67
LBR-201ENST00000272163 RFC4P35249 363 aa10.88□□□□□ -0.67
LBR-201ENST00000272163 GAS2L2Q8NHY3 880 aa10.88□□□□□ -0.67
LBR-201ENST00000272163 NEUROD2Q15784 382 aa10.87□□□□□ -0.67
LBR-201ENST00000272163 PARD3Q8TEW0 1356 aa10.87□□□□□ -0.67
LBR-201ENST00000272163 PLSCR1O15162 318 aa10.87□□□□□ -0.67
LBR-201ENST00000272163 EYA1Q99502 592 aa10.87□□□□□ -0.67
LBR-201ENST00000272163 TMX4Q9H1E5 349 aaPredicted RBP10.87□□□□□ -0.67
LBR-201ENST00000272163 SLC15A2Q16348 729 aa10.87□□□□□ -0.67
LBR-201ENST00000272163 RTCBQ9Y3I0 505 aaKnown RBP10.87□□□□□ -0.67
LBR-201ENST00000272163 USP31Q70CQ4 1352 aa10.87□□□□□ -0.67
LBR-201ENST00000272163 NHSL1Q5SYE7 1610 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms