RNA–Protein interactions for RNA: ENST00000269485.11

TNFRSF11A-201, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,591 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-201ENST00000269485 RBM10P98175 930 aaKnown RBP17.73■□□□□ 0.43
TNFRSF11A-201ENST00000269485 ORAI2Q96SN7 254 aa17.73■□□□□ 0.43
TNFRSF11A-201ENST00000269485 TRIM35Q9UPQ4 493 aa17.73■□□□□ 0.43
TNFRSF11A-201ENST00000269485 BLMP54132 1417 aaPredicted RBP17.72■□□□□ 0.43
TNFRSF11A-201ENST00000269485 POLR3AO14802 1390 aaPredicted RBP17.72■□□□□ 0.43
TNFRSF11A-201ENST00000269485 TTC21BQ7Z4L5 1316 aa17.72■□□□□ 0.43
TNFRSF11A-201ENST00000269485 FKBP5Q13451 457 aaPredicted RBP17.72■□□□□ 0.43
TNFRSF11A-201ENST00000269485 C8orf58Q8NAV2 365 aa17.72■□□□□ 0.43
TNFRSF11A-201ENST00000269485 RWDD1Q9H446 243 aaPredicted RBP17.72■□□□□ 0.43
TNFRSF11A-201ENST00000269485 TULP4Q9NRJ4 1543 aa17.72■□□□□ 0.43
TNFRSF11A-201ENST00000269485 SLC4A2P04920 1241 aa17.71■□□□□ 0.43
TNFRSF11A-201ENST00000269485 JARID2Q92833 1246 aaPredicted RBP17.71■□□□□ 0.43
TNFRSF11A-201ENST00000269485 PIK3C2BO00750 1634 aa17.71■□□□□ 0.43
TNFRSF11A-201ENST00000269485 NEXMIFQ5QGS0 1516 aa17.71■□□□□ 0.43
TNFRSF11A-201ENST00000269485 SETD1BQ9UPS6 1966 aaKnown RBP17.71■□□□□ 0.43
TNFRSF11A-201ENST00000269485 SMARCA5O60264 1052 aaPredicted RBP17.71■□□□□ 0.43
TNFRSF11A-201ENST00000269485 DTNBO60941 627 aa17.71■□□□□ 0.43
TNFRSF11A-201ENST00000269485 POLR1AO95602 1720 aaPredicted RBP17.71■□□□□ 0.43
TNFRSF11A-201ENST00000269485 MYO5BQ9ULV0 1848 aa17.71■□□□□ 0.42
TNFRSF11A-201ENST00000269485 EIF4A2Q14240 407 aaKnown RBP17.7■□□□□ 0.42
TNFRSF11A-201ENST00000269485 PPP6R1Q9UPN7 881 aa17.7■□□□□ 0.42
TNFRSF11A-201ENST00000269485 NKTRP30414 1462 aaKnown RBP17.7■□□□□ 0.42
TNFRSF11A-201ENST00000269485 OS9Q13438 667 aaPredicted RBP17.7■□□□□ 0.42
TNFRSF11A-201ENST00000269485 RNF123Q5XPI4 1314 aa17.69■□□□□ 0.42
TNFRSF11A-201ENST00000269485 IQGAP1P46940 1657 aa17.69■□□□□ 0.42
TNFRSF11A-201ENST00000269485 ADGRB1O14514 1584 aa17.69■□□□□ 0.42
TNFRSF11A-201ENST00000269485 MPRIPQ6WCQ1 1025 aa17.69■□□□□ 0.42
TNFRSF11A-201ENST00000269485 STRN4Q9NRL3 753 aa17.69■□□□□ 0.42
TNFRSF11A-201ENST00000269485 ZNF521Q96K83 1311 aa17.68■□□□□ 0.42
TNFRSF11A-201ENST00000269485 LMTK2Q8IWU2 1503 aa17.68■□□□□ 0.42
TNFRSF11A-201ENST00000269485 MBIPQ9NS73 344 aa17.68■□□□□ 0.42
TNFRSF11A-201ENST00000269485 RICTORQ6R327 1708 aa17.68■□□□□ 0.42
TNFRSF11A-201ENST00000269485 QRICH2Q9H0J4 1663 aa17.68■□□□□ 0.42
TNFRSF11A-201ENST00000269485 IPO8O15397 1037 aaKnown RBP17.68■□□□□ 0.42
TNFRSF11A-201ENST00000269485 ABCC11Q96J66 1382 aa17.67■□□□□ 0.42
TNFRSF11A-201ENST00000269485 SBNO2Q9Y2G9 1366 aa17.67■□□□□ 0.42
TNFRSF11A-201ENST00000269485 FCHSD2O94868 740 aa17.67■□□□□ 0.42
TNFRSF11A-201ENST00000269485 ARHGAP31Q2M1Z3 1444 aa17.67■□□□□ 0.42
TNFRSF11A-201ENST00000269485 MAP4K4O95819 1239 aaPredicted RBP17.66■□□□□ 0.42
TNFRSF11A-201ENST00000269485 FAM161AQ3B820 660 aa17.66■□□□□ 0.42
TNFRSF11A-201ENST00000269485 WDR63Q8IWG1 891 aa17.66■□□□□ 0.42
TNFRSF11A-201ENST00000269485 ZNF692Q9BU19 519 aaPredicted RBP17.66■□□□□ 0.42
TNFRSF11A-201ENST00000269485 ALKQ9UM73 1620 aa17.66■□□□□ 0.42
TNFRSF11A-201ENST00000269485 NFE2L2Q16236 605 aa17.66■□□□□ 0.42
TNFRSF11A-201ENST00000269485 SYTL4Q96C24 671 aaPredicted RBP17.66■□□□□ 0.42
TNFRSF11A-201ENST00000269485 ATF7IPQ6VMQ6 1270 aa17.66■□□□□ 0.42
TNFRSF11A-201ENST00000269485 MAP3K19Q56UN5 1328 aa17.65■□□□□ 0.42
TNFRSF11A-201ENST00000269485 ZMYM4Q5VZL5 1548 aa17.65■□□□□ 0.42
TNFRSF11A-201ENST00000269485 TRIM44Q96DX7 344 aaPredicted RBP17.64■□□□□ 0.41
TNFRSF11A-201ENST00000269485 STK31Q9BXU1 1019 aa17.64■□□□□ 0.41
TNFRSF11A-201ENST00000269485 PANK2Q9BZ23 570 aa17.64■□□□□ 0.41
TNFRSF11A-201ENST00000269485 CHMP3Q9Y3E7 222 aa17.64■□□□□ 0.41
TNFRSF11A-201ENST00000269485 TRIM6-TRIM34B2RNG4 842 aa17.63■□□□□ 0.41
TNFRSF11A-201ENST00000269485 TEFQ10587 303 aa17.63■□□□□ 0.41
TNFRSF11A-201ENST00000269485 PHF8Q9UPP1 1060 aa17.63■□□□□ 0.41
TNFRSF11A-201ENST00000269485 PTPRMP28827 1452 aa17.63■□□□□ 0.41
TNFRSF11A-201ENST00000269485 NPC1L1Q9UHC9 1359 aa17.63■□□□□ 0.41
TNFRSF11A-201ENST00000269485 IL13P35225 146 aa17.62■□□□□ 0.41
TNFRSF11A-201ENST00000269485 RILPL2Q969X0 211 aa17.62■□□□□ 0.41
TNFRSF11A-201ENST00000269485 PLEKHF1Q96S99 279 aa17.62■□□□□ 0.41
TNFRSF11A-201ENST00000269485 MVPQ14764 893 aaKnown RBP17.61■□□□□ 0.41
TNFRSF11A-201ENST00000269485 C16orf71Q8IYS4 520 aaPredicted RBP17.61■□□□□ 0.41
TNFRSF11A-201ENST00000269485 EXOC6BQ9Y2D4 811 aa17.61■□□□□ 0.41
TNFRSF11A-201ENST00000269485 MYL6BP14649 208 aa17.61■□□□□ 0.41
TNFRSF11A-201ENST00000269485 NCLP19338 710 aaKnown RBP17.61■□□□□ 0.41
TNFRSF11A-201ENST00000269485 AEBP2Q6ZN18 517 aaPredicted RBP17.6■□□□□ 0.41
TNFRSF11A-201ENST00000269485 DDX54Q8TDD1 881 aaKnown RBP17.6■□□□□ 0.41
TNFRSF11A-201ENST00000269485 CCDC85AQ96PX6 553 aaPredicted RBP17.6■□□□□ 0.41
TNFRSF11A-201ENST00000269485 PREX1Q8TCU6 1659 aa17.6■□□□□ 0.41
TNFRSF11A-201ENST00000269485 GNAI1P63096 354 aa17.6■□□□□ 0.41
TNFRSF11A-201ENST00000269485 IL1RAPL2Q9NP60 686 aa17.6■□□□□ 0.41
TNFRSF11A-201ENST00000269485 NRXN1Q9ULB1 1477 aa17.59■□□□□ 0.41
TNFRSF11A-201ENST00000269485 SLC39A6Q13433 755 aa17.59■□□□□ 0.41
TNFRSF11A-201ENST00000269485 PPLO60437 1756 aa17.59■□□□□ 0.41
TNFRSF11A-201ENST00000269485 MTHFSDQ2M296 383 aaKnown RBP17.59■□□□□ 0.41
TNFRSF11A-201ENST00000269485 EYA1Q99502 592 aa17.59■□□□□ 0.41
TNFRSF11A-201ENST00000269485 FAM177BA6PVY3 158 aa17.58■□□□□ 0.41
TNFRSF11A-201ENST00000269485 G2E3Q7L622 706 aa17.58■□□□□ 0.41
TNFRSF11A-201ENST00000269485 ATF3P18847 181 aa17.58■□□□□ 0.4
TNFRSF11A-201ENST00000269485 L1TD1Q5T7N2 865 aaKnown RBP17.58■□□□□ 0.4
TNFRSF11A-201ENST00000269485 DDX19BQ9UMR2 479 aa17.58■□□□□ 0.4
TNFRSF11A-201ENST00000269485 PRDM10Q9NQV6 1147 aa17.57■□□□□ 0.4
TNFRSF11A-201ENST00000269485 PDE3AQ14432 1141 aa17.57■□□□□ 0.4
TNFRSF11A-201ENST00000269485 GOLGB1Q14789 3259 aaKnown RBP17.57■□□□□ 0.4
TNFRSF11A-201ENST00000269485 RRP9O43818 475 aaKnown RBP17.56■□□□□ 0.4
TNFRSF11A-201ENST00000269485 ZNF530Q6P9A1 599 aaPredicted RBP17.56■□□□□ 0.4
TNFRSF11A-201ENST00000269485 TBX22Q9Y458 520 aa17.56■□□□□ 0.4
TNFRSF11A-201ENST00000269485 TMEM131LA2VDJ0 1609 aa17.56■□□□□ 0.4
TNFRSF11A-201ENST00000269485 MS4A1P11836 297 aa17.56■□□□□ 0.4
TNFRSF11A-201ENST00000269485 PTCD1O75127 700 aaKnown RBP17.55■□□□□ 0.4
TNFRSF11A-201ENST00000269485 TRMT2AQ8IZ69 625 aaKnown RBP17.55■□□□□ 0.4
TNFRSF11A-201ENST00000269485 FAM13BQ9NYF5 915 aa17.55■□□□□ 0.4
TNFRSF11A-201ENST00000269485 ZHX1Q9UKY1 873 aaPredicted RBP17.55■□□□□ 0.4
TNFRSF11A-201ENST00000269485 NSD2O96028 1365 aa17.54■□□□□ 0.4
TNFRSF11A-201ENST00000269485 HSP90AB1P08238 724 aaKnown RBP17.54■□□□□ 0.4
TNFRSF11A-201ENST00000269485 SIL1Q9H173 461 aa17.54■□□□□ 0.4
TNFRSF11A-201ENST00000269485 MYOM1P52179 1685 aa17.54■□□□□ 0.4
TNFRSF11A-201ENST00000269485 PDE4CQ08493 712 aa17.54■□□□□ 0.4
TNFRSF11A-201ENST00000269485 LAMC1P11047 1609 aa17.54■□□□□ 0.4
TNFRSF11A-201ENST00000269485 LARP6Q9BRS8 491 aaKnown RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms