RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 GCC1Q96CN9 775 aa16.65■□□□□ 0.26
NPC1-201ENST00000269228 TRIM29Q14134 588 aa16.65■□□□□ 0.26
NPC1-201ENST00000269228 MVPQ14764 893 aaKnown RBP16.65■□□□□ 0.26
NPC1-201ENST00000269228 RALYLQ86SE5 291 aaKnown RBP16.65■□□□□ 0.26
NPC1-201ENST00000269228 ERC1Q8IUD2 1116 aa16.65■□□□□ 0.26
NPC1-201ENST00000269228 NINLQ9Y2I6 1382 aa16.65■□□□□ 0.26
NPC1-201ENST00000269228 ERICH2A1L162 156 aa16.65■□□□□ 0.26
NPC1-201ENST00000269228 CHAF1AQ13111 956 aaPredicted RBP16.65■□□□□ 0.26
NPC1-201ENST00000269228 DUSP27Q5VZP5 1158 aa16.65■□□□□ 0.26
NPC1-201ENST00000269228 PBRM1Q86U86 1689 aa16.64■□□□□ 0.25
NPC1-201ENST00000269228 GOLGA6L3A6NEY3 463 aa16.64■□□□□ 0.25
NPC1-201ENST00000269228 RIMS2Q9UQ26 1411 aa16.64■□□□□ 0.25
NPC1-201ENST00000269228 TBC1D2BQ9UPU7 963 aa16.64■□□□□ 0.25
NPC1-201ENST00000269228 MPRIPQ6WCQ1 1025 aa16.64■□□□□ 0.25
NPC1-201ENST00000269228 AMOTQ4VCS5 1084 aa16.63■□□□□ 0.25
NPC1-201ENST00000269228 PPP1R1BQ9UD71 204 aaPredicted RBP16.63■□□□□ 0.25
NPC1-201ENST00000269228 FBLN1P23142 703 aa16.63■□□□□ 0.25
NPC1-201ENST00000269228 DDX49Q9Y6V7 483 aaKnown RBP16.63■□□□□ 0.25
NPC1-201ENST00000269228 DDX11L8A8MPP1 907 aa16.63■□□□□ 0.25
NPC1-201ENST00000269228 TMOD3Q9NYL9 352 aa16.62■□□□□ 0.25
NPC1-201ENST00000269228 CTDP1Q9Y5B0 961 aaPredicted RBP16.62■□□□□ 0.25
NPC1-201ENST00000269228 NGLY1Q96IV0 654 aa16.62■□□□□ 0.25
NPC1-201ENST00000269228 TCOF1Q13428 1488 aaKnown RBP16.62■□□□□ 0.25
NPC1-201ENST00000269228 TAF7Q15545 349 aaPredicted RBP16.62■□□□□ 0.25
NPC1-201ENST00000269228 LRPPRCP42704 1394 aaKnown RBP16.62■□□□□ 0.25
NPC1-201ENST00000269228 SRGAP3O43295 1099 aa16.61■□□□□ 0.25
NPC1-201ENST00000269228 KIAA2012Q0VF49 1180 aa16.61■□□□□ 0.25
NPC1-201ENST00000269228 STARD3NLO95772 234 aa16.61■□□□□ 0.25
NPC1-201ENST00000269228 CCDC57Q2TAC2 916 aa16.61■□□□□ 0.25
NPC1-201ENST00000269228 LRRCC1Q9C099 1032 aa16.61■□□□□ 0.25
NPC1-201ENST00000269228 CHRNA2Q15822 529 aa16.6■□□□□ 0.25
NPC1-201ENST00000269228 BICDL1Q6ZP65 573 aa16.6■□□□□ 0.25
NPC1-201ENST00000269228 VPS37CA5D8V6 355 aaPredicted RBP16.6■□□□□ 0.25
NPC1-201ENST00000269228 CCDC158Q5M9N0 1113 aa16.6■□□□□ 0.25
NPC1-201ENST00000269228 PHF14O94880 888 aa16.6■□□□□ 0.25
NPC1-201ENST00000269228 SAMD1Q6SPF0 538 aaPredicted RBP16.6■□□□□ 0.25
NPC1-201ENST00000269228 IFT57Q9NWB7 429 aa16.6■□□□□ 0.25
NPC1-201ENST00000269228 SMC3Q9UQE7 1217 aa16.6■□□□□ 0.25
NPC1-201ENST00000269228 TTC39AQ5SRH9 613 aa16.59■□□□□ 0.25
NPC1-201ENST00000269228 MPHOSPH8Q99549 860 aa16.59■□□□□ 0.25
NPC1-201ENST00000269228 ABCA5Q8WWZ7 1642 aa16.59■□□□□ 0.25
NPC1-201ENST00000269228 FOSBP53539 338 aa16.59■□□□□ 0.25
NPC1-201ENST00000269228 HSPA2P54652 639 aa16.59■□□□□ 0.25
NPC1-201ENST00000269228 CCDC85AQ96PX6 553 aaPredicted RBP16.59■□□□□ 0.25
NPC1-201ENST00000269228 NSD2O96028 1365 aa16.59■□□□□ 0.25
NPC1-201ENST00000269228 TMEM57Q8N5G2 664 aa16.59■□□□□ 0.25
NPC1-201ENST00000269228 CEP170Q5SW79 1584 aa16.58■□□□□ 0.25
NPC1-201ENST00000269228 MSH6P52701 1360 aa16.58■□□□□ 0.24
NPC1-201ENST00000269228 ZMYM3Q14202 1370 aa16.58■□□□□ 0.24
NPC1-201ENST00000269228 TTC21BQ7Z4L5 1316 aa16.57■□□□□ 0.24
NPC1-201ENST00000269228 SSH1Q8WYL5 1049 aa16.57■□□□□ 0.24
NPC1-201ENST00000269228 CFAP43Q8NDM7 1665 aa16.57■□□□□ 0.24
NPC1-201ENST00000269228 MTMR7Q9Y216 660 aa16.57■□□□□ 0.24
NPC1-201ENST00000269228 ABCC11Q96J66 1382 aa16.57■□□□□ 0.24
NPC1-201ENST00000269228 GNL3LQ9NVN8 582 aaKnown RBP16.56■□□□□ 0.24
NPC1-201ENST00000269228 PRAG1Q86YV5 1406 aa16.56■□□□□ 0.24
NPC1-201ENST00000269228 MAPKBP1O60336 1514 aa16.56■□□□□ 0.24
NPC1-201ENST00000269228 IL1RAPL2Q9NP60 686 aa16.56■□□□□ 0.24
NPC1-201ENST00000269228 ANKRD24Q8TF21 1146 aa16.55■□□□□ 0.24
NPC1-201ENST00000269228 CHMP5Q9NZZ3 219 aa16.55■□□□□ 0.24
NPC1-201ENST00000269228 EXOC5O00471 708 aa16.55■□□□□ 0.24
NPC1-201ENST00000269228 MAP4K4O95819 1239 aaPredicted RBP16.55■□□□□ 0.24
NPC1-201ENST00000269228 HIP1O00291 1037 aa16.55■□□□□ 0.24
NPC1-201ENST00000269228 PSMA5P28066 241 aa16.55■□□□□ 0.24
NPC1-201ENST00000269228 AACSQ86V21 672 aa16.55■□□□□ 0.24
NPC1-201ENST00000269228 FANCIQ9NVI1 1328 aa16.55■□□□□ 0.24
NPC1-201ENST00000269228 NCBP3Q53F19 620 aaKnown RBP16.54■□□□□ 0.24
NPC1-201ENST00000269228 CEP126Q9P2H0 1117 aa16.54■□□□□ 0.24
NPC1-201ENST00000269228 RALGAPBQ86X10 1494 aa16.54■□□□□ 0.24
NPC1-201ENST00000269228 SHANK2Q9UPX8 1470 aa16.54■□□□□ 0.24
NPC1-201ENST00000269228 ANKRD36BQ8N2N9 1353 aa16.54■□□□□ 0.24
NPC1-201ENST00000269228 RARSP54136 660 aaKnown RBP16.54■□□□□ 0.24
NPC1-201ENST00000269228 HSP90AB2PQ58FF8 381 aa16.54■□□□□ 0.24
NPC1-201ENST00000269228 PPIP5K1Q6PFW1 1433 aa16.54■□□□□ 0.24
NPC1-201ENST00000269228 PES1O00541 588 aaKnown RBP16.53■□□□□ 0.24
NPC1-201ENST00000269228 RPAP2Q8IXW5 612 aaPredicted RBP16.53■□□□□ 0.24
NPC1-201ENST00000269228 TCEAL9Q9UHQ7 104 aa16.53■□□□□ 0.24
NPC1-201ENST00000269228 NCKAP5LQ9HCH0 1330 aa16.53■□□□□ 0.24
NPC1-201ENST00000269228 CHD1LQ86WJ1 897 aa16.53■□□□□ 0.24
NPC1-201ENST00000269228 FAM83GA6ND36 823 aa16.52■□□□□ 0.24
NPC1-201ENST00000269228 NEK4P51957 841 aa16.52■□□□□ 0.24
NPC1-201ENST00000269228 TPD52L1Q16890 204 aaPredicted RBP16.52■□□□□ 0.24
NPC1-201ENST00000269228 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.52■□□□□ 0.24
NPC1-201ENST00000269228 F6X3S4 739 aa16.52■□□□□ 0.24
NPC1-201ENST00000269228 RRP12Q5JTH9 1297 aaKnown RBP16.52■□□□□ 0.24
NPC1-201ENST00000269228 LARP1Q6PKG0 1096 aaKnown RBP16.52■□□□□ 0.24
NPC1-201ENST00000269228 FKBP4Q02790 459 aaKnown RBP eCLIP16.52■□□□□ 0.23
NPC1-201ENST00000269228 SAFBQ15424 915 aaKnown RBP eCLIP16.52■□□□□ 0.23
NPC1-201ENST00000269228 SKOR2Q2VWA4 1001 aaPredicted RBP16.52■□□□□ 0.23
NPC1-201ENST00000269228 BICD2Q8TD16 824 aa16.52■□□□□ 0.23
NPC1-201ENST00000269228 EXOC6BQ9Y2D4 811 aa16.52■□□□□ 0.23
NPC1-201ENST00000269228 NPHP3Q7Z494 1330 aa16.52■□□□□ 0.23
NPC1-201ENST00000269228 TTC21AQ8NDW8 1320 aa16.52■□□□□ 0.23
NPC1-201ENST00000269228 IFNL2Q8IZJ0 200 aa16.51■□□□□ 0.23
NPC1-201ENST00000269228 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.51■□□□□ 0.233e-6■■■■□ 21.1
NPC1-201ENST00000269228 KDM4AO75164 1064 aa16.51■□□□□ 0.23
NPC1-201ENST00000269228 MYD88Q99836 296 aa16.51■□□□□ 0.23
NPC1-201ENST00000269228 ALDH1L2Q3SY69 923 aa16.51■□□□□ 0.23
NPC1-201ENST00000269228 ZRANB1Q9UGI0 708 aa16.51■□□□□ 0.23
NPC1-201ENST00000269228 UBAP1LF5GYI3 381 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms