RNA–Protein interactions for RNA: ENST00000264933.8

PDCD6-201, Transcript of programmed cell death 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDCD6, Length 1,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-201ENST00000264933 LTN1O94822 1766 aa18.37■□□□□ 0.53
PDCD6-201ENST00000264933 FBLN1P23142 703 aa18.36■□□□□ 0.53
PDCD6-201ENST00000264933 NPC1L1Q9UHC9 1359 aa18.36■□□□□ 0.53
PDCD6-201ENST00000264933 RGPD5Q99666 1765 aa18.35■□□□□ 0.53
PDCD6-201ENST00000264933 COG3Q96JB2 828 aa18.35■□□□□ 0.53
PDCD6-201ENST00000264933 CCDC9Q9Y3X0 531 aaKnown RBP18.35■□□□□ 0.53
PDCD6-201ENST00000264933 NSD2O96028 1365 aa18.34■□□□□ 0.53
PDCD6-201ENST00000264933 KRT27Q7Z3Y8 459 aa18.33■□□□□ 0.52
PDCD6-201ENST00000264933 CPDO75976 1380 aa18.32■□□□□ 0.52
PDCD6-201ENST00000264933 KIAA0232Q92628 1395 aa18.32■□□□□ 0.52
PDCD6-201ENST00000264933 LMO7Q8WWI1 1683 aa18.32■□□□□ 0.52
PDCD6-201ENST00000264933 SPATA31A5Q5VU36 1347 aa18.32■□□□□ 0.52
PDCD6-201ENST00000264933 SPATA31A7Q8IWB4 1347 aa18.32■□□□□ 0.52
PDCD6-201ENST00000264933 ZC3H6P61129 1189 aaKnown RBP18.32■□□□□ 0.52
PDCD6-201ENST00000264933 FAM98CQ17RN3 349 aaKnown RBP18.32■□□□□ 0.52
PDCD6-201ENST00000264933 DEFB132Q7Z7B7 95 aa18.32■□□□□ 0.52
PDCD6-201ENST00000264933 ARHGEF25Q86VW2 580 aa18.32■□□□□ 0.52
PDCD6-201ENST00000264933 KCNH5Q8NCM2 988 aa18.32■□□□□ 0.52
PDCD6-201ENST00000264933 CC2D1BQ5T0F9 858 aaKnown RBP18.31■□□□□ 0.52
PDCD6-201ENST00000264933 PRDM11Q9NQV5 511 aa18.31■□□□□ 0.52
PDCD6-201ENST00000264933 THSD7AQ9UPZ6 1657 aa18.31■□□□□ 0.52
PDCD6-201ENST00000264933 PEAK1Q9H792 1746 aa18.3■□□□□ 0.52
PDCD6-201ENST00000264933 SOX12O15370 315 aa18.29■□□□□ 0.52
PDCD6-201ENST00000264933 CHRNA2Q15822 529 aa18.29■□□□□ 0.52
PDCD6-201ENST00000264933 AATKQ6ZMQ8 1374 aa18.29■□□□□ 0.52
PDCD6-201ENST00000264933 CAMTA1Q9Y6Y1 1673 aa18.28■□□□□ 0.52
PDCD6-201ENST00000264933 AXIN2Q9Y2T1 843 aa18.27■□□□□ 0.52
PDCD6-201ENST00000264933 MAP3K19Q56UN5 1328 aa18.26■□□□□ 0.51
PDCD6-201ENST00000264933 SPATA31A1Q5TZJ5 1347 aa18.26■□□□□ 0.51
PDCD6-201ENST00000264933 RRS1Q15050 365 aaKnown RBP18.26■□□□□ 0.51
PDCD6-201ENST00000264933 MORC1Q86VD1 984 aa18.26■□□□□ 0.51
PDCD6-201ENST00000264933 A0A0G2JS52 829 aa18.25■□□□□ 0.51
PDCD6-201ENST00000264933 MYT1Q01538 1121 aa18.25■□□□□ 0.51
PDCD6-201ENST00000264933 POLKQ9UBT6 870 aa18.25■□□□□ 0.51
PDCD6-201ENST00000264933 TNNT2P45379 298 aaPredicted RBP18.24■□□□□ 0.51
PDCD6-201ENST00000264933 CNGB1Q14028 1251 aaPredicted RBP18.24■□□□□ 0.51
PDCD6-201ENST00000264933 FAM182BQ5T319 152 aa18.24■□□□□ 0.51
PDCD6-201ENST00000264933 EMILIN1Q9Y6C2 1016 aa18.24■□□□□ 0.51
PDCD6-201ENST00000264933 ABCC6O95255 1503 aa18.23■□□□□ 0.51
PDCD6-201ENST00000264933 PARD3Q8TEW0 1356 aa18.23■□□□□ 0.51
PDCD6-201ENST00000264933 SMG6Q86US8 1419 aaKnown RBP18.23■□□□□ 0.51
PDCD6-201ENST00000264933 RGPD2P0DJD1 1756 aa18.22■□□□□ 0.51
PDCD6-201ENST00000264933 IP6K1Q92551 441 aa18.22■□□□□ 0.51
PDCD6-201ENST00000264933 ZBTB7CA1YPR0 619 aa18.21■□□□□ 0.51
PDCD6-201ENST00000264933 HOXC9P31274 260 aa18.21■□□□□ 0.51
PDCD6-201ENST00000264933 SF3B2Q13435 895 aaKnown RBP18.21■□□□□ 0.51
PDCD6-201ENST00000264933 STRN4Q9NRL3 753 aa18.21■□□□□ 0.51
PDCD6-201ENST00000264933 COL5A2P05997 1499 aaPredicted RBP18.2■□□□□ 0.5
PDCD6-201ENST00000264933 KIF24Q5T7B8 1368 aa18.19■□□□□ 0.5
PDCD6-201ENST00000264933 DISP2A7MBM2 1401 aa18.19■□□□□ 0.5
PDCD6-201ENST00000264933 RTL1A6NKG5 1358 aa18.18■□□□□ 0.5
PDCD6-201ENST00000264933 TNS1Q9HBL0 1735 aaKnown RBP18.18■□□□□ 0.5
PDCD6-201ENST00000264933 PPP2R1AP30153 589 aa18.18■□□□□ 0.5
PDCD6-201ENST00000264933 HSP90AB2PQ58FF8 381 aa18.18■□□□□ 0.5
PDCD6-201ENST00000264933 LARP1Q6PKG0 1096 aaKnown RBP18.18■□□□□ 0.5
PDCD6-201ENST00000264933 PRKRIP1Q9H875 184 aaPredicted RBP18.18■□□□□ 0.5
PDCD6-201ENST00000264933 RGPD1P0DJD0 1748 aa18.18■□□□□ 0.5
PDCD6-201ENST00000264933 AMPHP49418 695 aa18.17■□□□□ 0.5
PDCD6-201ENST00000264933 MTHFSP49914 203 aa18.17■□□□□ 0.5
PDCD6-201ENST00000264933 BARGINQ6ZT62 677 aa18.17■□□□□ 0.5
PDCD6-201ENST00000264933 FLT4P35916 1363 aa18.17■□□□□ 0.5
PDCD6-201ENST00000264933 BAG6P46379 1132 aa18.16■□□□□ 0.5
PDCD6-201ENST00000264933 RALBP1Q15311 655 aa18.16■□□□□ 0.5
PDCD6-201ENST00000264933 INSRP06213 1382 aa18.16■□□□□ 0.5
PDCD6-201ENST00000264933 EN1Q05925 392 aaPredicted RBP18.15■□□□□ 0.5
PDCD6-201ENST00000264933 USP35Q9P2H5 1018 aa18.15■□□□□ 0.5
PDCD6-201ENST00000264933 ERBB3P21860 1342 aa18.14■□□□□ 0.49
PDCD6-201ENST00000264933 COL3A1P02461 1466 aaPredicted RBP18.14■□□□□ 0.49
PDCD6-201ENST00000264933 FAM208AQ9UK61 1670 aaKnown RBP18.13■□□□□ 0.49
PDCD6-201ENST00000264933 PPM1GO15355 546 aaPredicted RBP18.13■□□□□ 0.49
PDCD6-201ENST00000264933 EVA1CP58658 441 aa18.13■□□□□ 0.49
PDCD6-201ENST00000264933 TCP11L2Q8N4U5 519 aa18.13■□□□□ 0.49
PDCD6-201ENST00000264933 ANKRD24Q8TF21 1146 aa18.13■□□□□ 0.49
PDCD6-201ENST00000264933 WDR17Q8IZU2 1322 aa18.13■□□□□ 0.49
PDCD6-201ENST00000264933 MSH5O43196 834 aa18.12■□□□□ 0.49
PDCD6-201ENST00000264933 LRP5O75197 1615 aa18.12■□□□□ 0.49
PDCD6-201ENST00000264933 PSDA5PKW4 1024 aaPredicted RBP18.11■□□□□ 0.49
PDCD6-201ENST00000264933 FAM196AQ6ZSG2 479 aa18.11■□□□□ 0.49
PDCD6-201ENST00000264933 WNK3Q9BYP7 1800 aa18.1■□□□□ 0.49
PDCD6-201ENST00000264933 TRIM37O94972 964 aa18.1■□□□□ 0.49
PDCD6-201ENST00000264933 EIF4A2Q14240 407 aaKnown RBP18.1■□□□□ 0.49
PDCD6-201ENST00000264933 LTV1Q96GA3 475 aaPredicted RBP18.1■□□□□ 0.49
PDCD6-201ENST00000264933 CAMKK2Q96RR4 588 aa18.1■□□□□ 0.49
PDCD6-201ENST00000264933 CRB1P82279 1406 aa18.09■□□□□ 0.49
PDCD6-201ENST00000264933 MYBBP1AQ9BQG0 1328 aaKnown RBP18.09■□□□□ 0.49
PDCD6-201ENST00000264933 IL13P35225 146 aa18.09■□□□□ 0.49
PDCD6-201ENST00000264933 EZH2Q15910 746 aaKnown RBP18.09■□□□□ 0.49
PDCD6-201ENST00000264933 THRAP3Q9Y2W1 955 aaKnown RBP18.09■□□□□ 0.49
PDCD6-201ENST00000264933 PARP4Q9UKK3 1724 aaKnown RBP18.09■□□□□ 0.49
PDCD6-201ENST00000264933 NBPF6Q5VWK0 638 aa18.08■□□□□ 0.48
PDCD6-201ENST00000264933 NBPF4Q96M43 638 aa18.08■□□□□ 0.48
PDCD6-201ENST00000264933 NCAPD2Q15021 1401 aa18.07■□□□□ 0.48
PDCD6-201ENST00000264933 CARD10Q9BWT7 1032 aa18.07■□□□□ 0.48
PDCD6-201ENST00000264933 PDE3BQ13370 1112 aa18.06■□□□□ 0.48
PDCD6-201ENST00000264933 TOM1L2Q6ZVM7 507 aa18.06■□□□□ 0.48
PDCD6-201ENST00000264933 EYA1Q99502 592 aa18.06■□□□□ 0.48
PDCD6-201ENST00000264933 LRRC37A3O60309 1634 aa18.05■□□□□ 0.48
PDCD6-201ENST00000264933 ANP32CO43423 234 aa18.05■□□□□ 0.48
PDCD6-201ENST00000264933 CSB-PGBD3P0DP91 1061 aa18.05■□□□□ 0.48
PDCD6-201ENST00000264933 APBA3O96018 575 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms