RNA–Protein interactions for RNA: ENST00000264001.8

CKLF-201, Transcript of chemokine like factor, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CKLF, Length 669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-201ENST00000264001 NFAT5O94916 1531 aa28.43■■■□□ 2.14
CKLF-201ENST00000264001 USP54Q70EL1 1684 aa28.42■■■□□ 2.14
CKLF-201ENST00000264001 A0A1W2PP64 1363 aa28.42■■■□□ 2.14
CKLF-201ENST00000264001 USP31Q70CQ4 1352 aa28.42■■■□□ 2.14
CKLF-201ENST00000264001 USP47Q96K76 1375 aa28.42■■■□□ 2.14
CKLF-201ENST00000264001 SLC24A1O60721 1099 aa28.42■■■□□ 2.14
CKLF-201ENST00000264001 TERF2IPQ9NYB0 399 aa28.42■■■□□ 2.14
CKLF-201ENST00000264001 NME9Q86XW9 330 aa28.41■■■□□ 2.14
CKLF-201ENST00000264001 TIMELESSQ9UNS1 1208 aa28.41■■■□□ 2.14
CKLF-201ENST00000264001 AXIN2Q9Y2T1 843 aa28.41■■■□□ 2.14
CKLF-201ENST00000264001 EDC4Q6P2E9 1401 aaKnown RBP28.41■■■□□ 2.14
CKLF-201ENST00000264001 WNK3Q9BYP7 1800 aa28.4■■■□□ 2.14
CKLF-201ENST00000264001 NINLQ9Y2I6 1382 aa28.38■■■□□ 2.13
CKLF-201ENST00000264001 PDE3BQ13370 1112 aa28.38■■■□□ 2.13
CKLF-201ENST00000264001 FAM196AQ6ZSG2 479 aa28.37■■■□□ 2.13
CKLF-201ENST00000264001 TOM1L2Q6ZVM7 507 aa28.37■■■□□ 2.13
CKLF-201ENST00000264001 RREB1Q92766 1687 aa28.36■■■□□ 2.13
CKLF-201ENST00000264001 WDR17Q8IZU2 1322 aa28.36■■■□□ 2.13
CKLF-201ENST00000264001 TMF1P82094 1093 aa28.34■■■□□ 2.13
CKLF-201ENST00000264001 LTN1O94822 1766 aa28.33■■■□□ 2.13
CKLF-201ENST00000264001 EN1Q05925 392 aaPredicted RBP28.33■■■□□ 2.13
CKLF-201ENST00000264001 ABCC6O95255 1503 aa28.33■■■□□ 2.13
CKLF-201ENST00000264001 LRRC37A3O60309 1634 aa28.32■■■□□ 2.12
CKLF-201ENST00000264001 CSB-PGBD3P0DP91 1061 aa28.31■■■□□ 2.12
CKLF-201ENST00000264001 NUP188Q5SRE5 1749 aa28.31■■■□□ 2.12
CKLF-201ENST00000264001 OVOS2A0A0J9YW53 1432 aa28.3■■■□□ 2.12
CKLF-201ENST00000264001 OVOS2Q6IE36 1432 aa28.3■■■□□ 2.12
CKLF-201ENST00000264001 TRIM37O94972 964 aa28.3■■■□□ 2.12
CKLF-201ENST00000264001 PARD3Q8TEW0 1356 aa28.29■■■□□ 2.12
CKLF-201ENST00000264001 PSDA5PKW4 1024 aaPredicted RBP28.28■■■□□ 2.12
CKLF-201ENST00000264001 ANKRD36BQ8N2N9 1353 aa28.27■■■□□ 2.12
CKLF-201ENST00000264001 CARD10Q9BWT7 1032 aa28.27■■■□□ 2.12
CKLF-201ENST00000264001 SBF2Q86WG5 1849 aa28.27■■■□□ 2.12
CKLF-201ENST00000264001 PEAK1Q9H792 1746 aa28.26■■■□□ 2.12
CKLF-201ENST00000264001 RGPD3A6NKT7 1758 aaPredicted RBP28.25■■■□□ 2.11
CKLF-201ENST00000264001 RGPD4Q7Z3J3 1758 aa28.25■■■□□ 2.11
CKLF-201ENST00000264001 DDB1Q16531 1140 aa28.25■■■□□ 2.11
CKLF-201ENST00000264001 CCER1Q8TC90 406 aaPredicted RBP28.24■■■□□ 2.11
CKLF-201ENST00000264001 EZH2Q15910 746 aaKnown RBP28.23■■■□□ 2.11
CKLF-201ENST00000264001 CDCA8Q53HL2 280 aa28.23■■■□□ 2.11
CKLF-201ENST00000264001 CDCA7Q9BWT1 371 aaPredicted RBP28.23■■■□□ 2.11
CKLF-201ENST00000264001 CCDC7Q96M83 1385 aa28.22■■■□□ 2.11
CKLF-201ENST00000264001 ERBB3P21860 1342 aa28.21■■■□□ 2.11
CKLF-201ENST00000264001 OVOS2A0A0G2JMS6 1433 aa28.21■■■□□ 2.11
CKLF-201ENST00000264001 APBA3O96018 575 aa28.21■■■□□ 2.11
CKLF-201ENST00000264001 COG3Q96JB2 828 aa28.21■■■□□ 2.11
CKLF-201ENST00000264001 CAMKK2Q96RR4 588 aa28.2■■■□□ 2.1
CKLF-201ENST00000264001 C11orf95C9JLR9 678 aaPredicted RBP28.19■■■□□ 2.1
CKLF-201ENST00000264001 R3HDM1Q15032 1099 aaKnown RBP28.18■■■□□ 2.1
CKLF-201ENST00000264001 ANKRD24Q8TF21 1146 aa28.17■■■□□ 2.1
CKLF-201ENST00000264001 NLRP2Q9NX02 1062 aa28.16■■■□□ 2.1
CKLF-201ENST00000264001 MYOM1P52179 1685 aa28.16■■■□□ 2.1
CKLF-201ENST00000264001 IP6K1Q92551 441 aa28.15■■■□□ 2.1
CKLF-201ENST00000264001 MARCH10Q8NA82 808 aaPredicted RBP28.14■■■□□ 2.1
CKLF-201ENST00000264001 FYB1O15117 783 aa28.13■■■□□ 2.09
CKLF-201ENST00000264001 FBLN1P23142 703 aa28.13■■■□□ 2.09
CKLF-201ENST00000264001 EXOC5O00471 708 aa28.12■■■□□ 2.09
CKLF-201ENST00000264001 GGNBP2Q9H3C7 697 aa28.12■■■□□ 2.09
CKLF-201ENST00000264001 KIF20BQ96Q89 1820 aa28.12■■■□□ 2.09
CKLF-201ENST00000264001 MAP3K19Q56UN5 1328 aa28.12■■■□□ 2.09
CKLF-201ENST00000264001 TNS2Q63HR2 1409 aa28.1■■■□□ 2.09
CKLF-201ENST00000264001 FAM208AQ9UK61 1670 aaKnown RBP28.09■■■□□ 2.09
CKLF-201ENST00000264001 BCL9O00512 1426 aa28.09■■■□□ 2.09
CKLF-201ENST00000264001 AMPHP49418 695 aa28.08■■■□□ 2.09
CKLF-201ENST00000264001 LTV1Q96GA3 475 aaPredicted RBP28.08■■■□□ 2.09
CKLF-201ENST00000264001 IL2RBP14784 551 aa28.07■■■□□ 2.08
CKLF-201ENST00000264001 HOXC9P31274 260 aa28.07■■■□□ 2.08
CKLF-201ENST00000264001 CARD14Q9BXL6 1004 aa28.06■■■□□ 2.08
CKLF-201ENST00000264001 BCL11BQ9C0K0 894 aaPredicted RBP28.06■■■□□ 2.08
CKLF-201ENST00000264001 EIF4G2P78344 907 aaKnown RBP eCLIP28.05■■■□□ 2.08
CKLF-201ENST00000264001 RRS1Q15050 365 aaKnown RBP28.05■■■□□ 2.08
CKLF-201ENST00000264001 PTF1AQ7RTS3 328 aa28.05■■■□□ 2.08
CKLF-201ENST00000264001 NSD3Q9BZ95 1437 aa28.04■■■□□ 2.08
CKLF-201ENST00000264001 NBPF14Q5TI25 921 aa28.04■■■□□ 2.08
CKLF-201ENST00000264001 RGPD2P0DJD1 1756 aa28.04■■■□□ 2.08
CKLF-201ENST00000264001 HSPA5P11021 654 aaKnown RBP28.03■■■□□ 2.08
CKLF-201ENST00000264001 RTL1A6NKG5 1358 aa28.02■■■□□ 2.08
CKLF-201ENST00000264001 POLR3GLQ9BT43 218 aa28.02■■■□□ 2.08
CKLF-201ENST00000264001 NHSQ6T4R5 1651 aa28.01■■■□□ 2.07
CKLF-201ENST00000264001 PLSCR1O15162 318 aa28.01■■■□□ 2.07
CKLF-201ENST00000264001 KAT6BQ8WYB5 2073 aa28.01■■■□□ 2.07
CKLF-201ENST00000264001 CASZ1Q86V15 1759 aa27.97■■■□□ 2.07
CKLF-201ENST00000264001 KCNQ2O43526 872 aa27.94■■■□□ 2.06
CKLF-201ENST00000264001 ACSBG1Q96GR2 724 aa27.94■■■□□ 2.06
CKLF-201ENST00000264001 CGNL1Q0VF96 1302 aa27.92■■■□□ 2.06
CKLF-201ENST00000264001 FLT4P35916 1363 aa27.92■■■□□ 2.06
CKLF-201ENST00000264001 HSP90AB2PQ58FF8 381 aa27.92■■■□□ 2.06
CKLF-201ENST00000264001 SMG6Q86US8 1419 aaKnown RBP27.92■■■□□ 2.06
CKLF-201ENST00000264001 INSRP06213 1382 aa27.91■■■□□ 2.06
CKLF-201ENST00000264001 KIF24Q5T7B8 1368 aa27.91■■■□□ 2.06
CKLF-201ENST00000264001 NBPF6Q5VWK0 638 aa27.9■■■□□ 2.06
CKLF-201ENST00000264001 PROM2Q8N271 834 aa27.9■■■□□ 2.06
CKLF-201ENST00000264001 DDX54Q8TDD1 881 aaKnown RBP27.9■■■□□ 2.06
CKLF-201ENST00000264001 NBPF4Q96M43 638 aa27.9■■■□□ 2.06
CKLF-201ENST00000264001 BTAF1O14981 1849 aa27.9■■■□□ 2.06
CKLF-201ENST00000264001 MAP2P11137 1827 aaKnown RBP27.9■■■□□ 2.06
CKLF-201ENST00000264001 MEGF6O75095 1541 aa27.89■■■□□ 2.06
CKLF-201ENST00000264001 EMILIN1Q9Y6C2 1016 aa27.89■■■□□ 2.06
CKLF-201ENST00000264001 SHANK3Q9BYB0 1731 aa27.88■■■□□ 2.05
CKLF-201ENST00000264001 USHBP1Q8N6Y0 703 aa27.87■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms