RNA–Protein interactions for RNA: ENST00000263733.4

FAM20B-201, Transcript of FAM20B, glycosaminoglycan xylosylkinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM20B, Length 5,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM20B-201ENST00000263733 DAPK1P53355 1430 aa23.16■■□□□ 1.3
FAM20B-201ENST00000263733 MAPK8IP2Q13387 824 aaPredicted RBP23.16■■□□□ 1.3
FAM20B-201ENST00000263733 RAPGEF4Q8WZA2 1011 aa23.16■■□□□ 1.3
FAM20B-201ENST00000263733 NUP62CLQ9H1M0 184 aa23.16■■□□□ 1.3
FAM20B-201ENST00000263733 EXOC6BQ9Y2D4 811 aa23.16■■□□□ 1.3
FAM20B-201ENST00000263733 ERICH4A6NGS2 130 aa23.15■■□□□ 1.3
FAM20B-201ENST00000263733 HIP1O00291 1037 aa23.15■■□□□ 1.3
FAM20B-201ENST00000263733 AMOTL1Q8IY63 956 aa23.15■■□□□ 1.3
FAM20B-201ENST00000263733 IGHDP01880 384 aa23.14■■□□□ 1.3
FAM20B-201ENST00000263733 FERMT3Q86UX7 667 aa23.14■■□□□ 1.3
FAM20B-201ENST00000263733 PDRG1Q9NUG6 133 aa23.14■■□□□ 1.3
FAM20B-201ENST00000263733 DUSP27Q5VZP5 1158 aa23.14■■□□□ 1.29
FAM20B-201ENST00000263733 CDK19Q9BWU1 502 aa23.13■■□□□ 1.29
FAM20B-201ENST00000263733 LEKR1Q6ZMV7 388 aa23.13■■□□□ 1.29
FAM20B-201ENST00000263733 NLRP2Q9NX02 1062 aa23.13■■□□□ 1.29
FAM20B-201ENST00000263733 CCP110O43303 1012 aa23.13■■□□□ 1.29
FAM20B-201ENST00000263733 ERCC4Q92889 916 aaPredicted RBP23.13■■□□□ 1.29
FAM20B-201ENST00000263733 NOL10Q9BSC4 688 aaKnown RBP23.13■■□□□ 1.29
FAM20B-201ENST00000263733 AXDND1Q5T1B0 1012 aaPredicted RBP23.12■■□□□ 1.29
FAM20B-201ENST00000263733 RRS1Q15050 365 aaKnown RBP23.11■■□□□ 1.29
FAM20B-201ENST00000263733 NUTM1Q86Y26 1132 aa23.11■■□□□ 1.29
FAM20B-201ENST00000263733 SRGAP3O43295 1099 aa23.11■■□□□ 1.29
FAM20B-201ENST00000263733 SRCIN1Q9C0H9 1055 aa23.11■■□□□ 1.29
FAM20B-201ENST00000263733 RRP12Q5JTH9 1297 aaKnown RBP23.11■■□□□ 1.29
FAM20B-201ENST00000263733 BLOC1S2Q6QNY1 142 aa23.11■■□□□ 1.29
FAM20B-201ENST00000263733 ERC1Q8IUD2 1116 aa23.1■■□□□ 1.29
FAM20B-201ENST00000263733 NKTRP30414 1462 aaKnown RBP23.1■■□□□ 1.29
FAM20B-201ENST00000263733 FILIP1LQ4L180 1135 aa23.1■■□□□ 1.29
FAM20B-201ENST00000263733 PRM3Q9NNZ6 103 aa23.1■■□□□ 1.29
FAM20B-201ENST00000263733 ANKRD1Q15327 319 aa23.1■■□□□ 1.29
FAM20B-201ENST00000263733 NSD3Q9BZ95 1437 aa23.09■■□□□ 1.29
FAM20B-201ENST00000263733 OFD1O75665 1012 aa23.09■■□□□ 1.29
FAM20B-201ENST00000263733 RPAP2Q8IXW5 612 aaPredicted RBP23.09■■□□□ 1.29
FAM20B-201ENST00000263733 BRMS1Q9HCU9 246 aa23.09■■□□□ 1.29
FAM20B-201ENST00000263733 ANKRD30BQ9BXX2 1392 aa23.09■■□□□ 1.29
FAM20B-201ENST00000263733 CASTP20810 708 aaKnown RBP23.09■■□□□ 1.29
FAM20B-201ENST00000263733 DDX54Q8TDD1 881 aaKnown RBP23.09■■□□□ 1.29
FAM20B-201ENST00000263733 TXNDC2Q86VQ3 553 aa23.09■■□□□ 1.29
FAM20B-201ENST00000263733 NCOA1Q15788 1441 aa23.09■■□□□ 1.29
FAM20B-201ENST00000263733 LRPPRCP42704 1394 aaKnown RBP23.08■■□□□ 1.29
FAM20B-201ENST00000263733 XBP1P17861 261 aa23.08■■□□□ 1.29
FAM20B-201ENST00000263733 MIS18AQ9NYP9 233 aa23.08■■□□□ 1.29
FAM20B-201ENST00000263733 AACSQ86V21 672 aa23.08■■□□□ 1.28
FAM20B-201ENST00000263733 CCDC83Q8IWF9 413 aa23.08■■□□□ 1.28
FAM20B-201ENST00000263733 SMARCE1Q969G3 411 aa23.08■■□□□ 1.28
FAM20B-201ENST00000263733 GDPD2Q9HCC8 539 aa23.08■■□□□ 1.28
FAM20B-201ENST00000263733 USP25Q9UHP3 1055 aa23.08■■□□□ 1.28
FAM20B-201ENST00000263733 CDR1P51861 262 aa23.07■■□□□ 1.28
FAM20B-201ENST00000263733 DDX11Q96FC9 970 aa23.07■■□□□ 1.28
FAM20B-201ENST00000263733 MAP3K11Q16584 847 aa23.07■■□□□ 1.28
FAM20B-201ENST00000263733 ABTB2Q8N961 1025 aa23.07■■□□□ 1.28
FAM20B-201ENST00000263733 DCTN1Q14203 1278 aa23.06■■□□□ 1.28
FAM20B-201ENST00000263733 EFCAB5A4FU69 1503 aa23.06■■□□□ 1.28
FAM20B-201ENST00000263733 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.05■■□□□ 1.284e-6■■■□□ 16.6
FAM20B-201ENST00000263733 TSPYL1Q9H0U9 437 aa23.05■■□□□ 1.28
FAM20B-201ENST00000263733 FCHSD2O94868 740 aa23.05■■□□□ 1.28
FAM20B-201ENST00000263733 LARP6Q9BRS8 491 aaKnown RBP23.05■■□□□ 1.28
FAM20B-201ENST00000263733 PANK2Q9BZ23 570 aa23.05■■□□□ 1.28
FAM20B-201ENST00000263733 RBM27Q9P2N5 1060 aaKnown RBP23.05■■□□□ 1.28
FAM20B-201ENST00000263733 CEP57L1Q8IYX8 460 aa23.04■■□□□ 1.28
FAM20B-201ENST00000263733 PODXL2Q9NZ53 605 aa23.04■■□□□ 1.28
FAM20B-201ENST00000263733 NFE2L2Q16236 605 aa23.04■■□□□ 1.28
FAM20B-201ENST00000263733 TBC1D32Q96NH3 1257 aa23.04■■□□□ 1.28
FAM20B-201ENST00000263733 FAM177BA6PVY3 158 aa23.04■■□□□ 1.28
FAM20B-201ENST00000263733 SART3Q15020 963 aaKnown RBP23.04■■□□□ 1.28
FAM20B-201ENST00000263733 ZSCAN31Q96LW9 406 aaPredicted RBP23.03■■□□□ 1.28
FAM20B-201ENST00000263733 PDCL3Q9H2J4 239 aa23.03■■□□□ 1.28
FAM20B-201ENST00000263733 TRIM27P14373 513 aa23.03■■□□□ 1.28
FAM20B-201ENST00000263733 EPS15P42566 896 aa23.03■■□□□ 1.28
FAM20B-201ENST00000263733 PPFIBP1Q86W92 1011 aa23.03■■□□□ 1.28
FAM20B-201ENST00000263733 CYB5RLQ6IPT4 315 aa23.03■■□□□ 1.28
FAM20B-201ENST00000263733 JMYQ8N9B5 988 aa23.02■■□□□ 1.28
FAM20B-201ENST00000263733 PPP6R1Q9UPN7 881 aa23.02■■□□□ 1.28
FAM20B-201ENST00000263733 TBC1D2BQ9UPU7 963 aa23.02■■□□□ 1.28
FAM20B-201ENST00000263733 CFAP45Q9UL16 551 aa23.01■■□□□ 1.27
FAM20B-201ENST00000263733 GPRASP1Q5JY77 1395 aa23.01■■□□□ 1.27
FAM20B-201ENST00000263733 XRCC6P12956 609 aaKnown RBP eCLIP23.01■■□□□ 1.27
FAM20B-201ENST00000263733 CCDC183Q5T5S1 534 aa23.01■■□□□ 1.27
FAM20B-201ENST00000263733 MX1P20591 662 aa23.01■■□□□ 1.27
FAM20B-201ENST00000263733 TCEAL9Q9UHQ7 104 aa23.01■■□□□ 1.27
FAM20B-201ENST00000263733 SAMD1Q6SPF0 538 aaPredicted RBP23■■□□□ 1.27
FAM20B-201ENST00000263733 TOP2BQ02880 1626 aa23■■□□□ 1.27
FAM20B-201ENST00000263733 BAG4O95429 457 aaKnown RBP23■■□□□ 1.27
FAM20B-201ENST00000263733 SUPT6HQ7KZ85 1726 aaKnown RBP23■■□□□ 1.27
FAM20B-201ENST00000263733 TBC1D9Q6ZT07 1266 aa23■■□□□ 1.27
FAM20B-201ENST00000263733 RDXP35241 583 aaKnown RBP22.99■■□□□ 1.27
FAM20B-201ENST00000263733 MCM10Q7L590 875 aa22.99■■□□□ 1.27
FAM20B-201ENST00000263733 MAGEC2Q9UBF1 373 aaPredicted RBP22.99■■□□□ 1.27
FAM20B-201ENST00000263733 TTC39AQ5SRH9 613 aa22.99■■□□□ 1.27
FAM20B-201ENST00000263733 PRPF40BQ6NWY9 871 aaKnown RBP22.99■■□□□ 1.27
FAM20B-201ENST00000263733 TROQ12816 1431 aaPredicted RBP22.99■■□□□ 1.27
FAM20B-201ENST00000263733 MYL6BP14649 208 aa22.99■■□□□ 1.27
FAM20B-201ENST00000263733 CT47A1Q5JQC4 288 aaPredicted RBP22.99■■□□□ 1.27
FAM20B-201ENST00000263733 UBXN4Q92575 508 aa22.99■■□□□ 1.27
FAM20B-201ENST00000263733 PLEKHO1Q53GL0 409 aaPredicted RBP22.99■■□□□ 1.27
FAM20B-201ENST00000263733 TRIM34Q9BYJ4 488 aa22.98■■□□□ 1.27
FAM20B-201ENST00000263733 ZHX1Q9UKY1 873 aaPredicted RBP22.98■■□□□ 1.27
FAM20B-201ENST00000263733 FAM193AP78312 1265 aa22.98■■□□□ 1.27
FAM20B-201ENST00000263733 CKAP2LQ8IYA6 745 aa22.98■■□□□ 1.27
FAM20B-201ENST00000263733 CDK13Q14004 1512 aaKnown RBP22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms